RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	TDP2	O95551	362 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	CCNE2	O96020	404 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	FAM86B2	P0C5J1	330 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	GHR	P10912	638 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	SCG2	P13521	617 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	SELP	P16109	830 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	CAPN2	P17655	700 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	PDIA3	P30101	505 aa	Known RBP	5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	GNAQ	P50148	359 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	TTC3	P53804	2025 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	WDR5	P61964	334 aa	Known RBP	5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	NKX3-2	P78367	333 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	SMAD3	P84022	425 aa	Known RBP	5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	GUCY1B3	Q02153	619 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	GHRHR	Q02643	423 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	PPFIA1	Q13136	1202 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	COL4A6	Q14031	1691 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	KRT32	Q14532	448 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	SKIV2L	Q15477	1246 aa	Known RBP	5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	TRIP11	Q15643	1979 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	PKN1	Q16512	942 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	TMEM266	Q2M3C6	531 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	TRIM71	Q2Q1W2	868 aa	Known RBP	5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	GNPTAB	Q3T906	1256 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	PRR16	Q569H4	304 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	PCNX4	Q63HM2	1172 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	NFRKB	Q6P4R8	1299 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	TRAF7	Q6Q0C0	670 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	NLRX1	Q86UT6	975 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	PLA2G4D	Q86XP0	818 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	MYOCD	Q8IZQ8	938 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	HERVK_113	Q902F9	699 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	NECAB3	Q96P71	396 aa	Predicted RBP	5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	USP26	Q9BXU7	913 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	TUT1	Q9H6E5	874 aa	Known RBP	5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	RIC8A	Q9NPQ8	531 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	PDRG1	Q9NUG6	133 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	RBM28	Q9NW13	759 aa	Known RBP	5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	HCST	Q9UBK5	93 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	PNMA2	Q9UL42	364 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	TRPC6	Q9Y210	931 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	STXBP5L	Q9Y2K9	1186 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171		Q9Y3F1	56 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	UBIAD1	Q9Y5Z9	338 aa		5.1	□□□□□ -1.59
LINC00649-219	ENST00000622171	MYH11	P35749	1972 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	BDP1	A6H8Y1	2624 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	BACH1	O14867	736 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	TLL1	O43897	1013 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	JAK2	O60674	1132 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	CENPB	P07199	599 aa	Predicted RBP	5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	SUPT20HL2	P0C7V6	817 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	KCNJ6	P48051	423 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	AK2	P54819	239 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	ACTR2	P61160	394 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	AKAP17A	Q02040	695 aa	Known RBP	5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	TFF2	Q03403	129 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	SCRN1	Q12765	414 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	BFSP2	Q13515	415 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	NEDD9	Q14511	834 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	PLCB4	Q15147	1175 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	GRIK4	Q16099	956 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	NTRK3	Q16288	839 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	UGCG	Q16739	394 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	PFKFB3	Q16875	520 aa	Predicted RBP	5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	INF2	Q27J81	1249 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	PAN2	Q504Q3	1202 aa	Known RBP	5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	RASIP1	Q5U651	963 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	METTL7B	Q6UX53	244 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	RUFY3	Q7L099	469 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	HERC6	Q8IVU3	1022 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	CCDC60	Q8IWA6	550 aa	Predicted RBP	5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	CKAP2L	Q8IYA6	745 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	REXO1	Q8N1G1	1221 aa	Known RBP	5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	DBF4B	Q8NFT6	615 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	OXER1	Q8TDS5	423 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	DNAJB3	Q8WWF6	145 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	KCNB2	Q92953	911 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	EMID1	Q96A84	441 aa	Predicted RBP	5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	MAP3K14	Q99558	947 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	MXRA8	Q9BRK3	442 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	LZTS2	Q9BRK4	669 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	C17orf80	Q9BSJ5	609 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	ZBED2	Q9BTP6	218 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	KATNAL1	Q9BW62	490 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	AGO4	Q9HCK5	861 aa	Known RBP	5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	JPH1	Q9HDC5	661 aa	Predicted RBP	5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	KCNH7	Q9NS40	1196 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	BARHL2	Q9NY43	387 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	SLC9A2	Q9UBY0	812 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	MSRA	Q9UJ68	235 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	TPCN1	Q9ULQ1	816 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	CYP46A1	Q9Y6A2	500 aa		5.09	□□□□□ -1.59
LINC00649-219	ENST00000622171	TDRD15	B5MCY1	1934 aa	Known RBP	5.08	□□□□□ -1.6
LINC00649-219	ENST00000622171		A0A087WWV3	80 aa		5.08	□□□□□ -1.6
LINC00649-219	ENST00000622171	LOC102724159	A0A0B4J2E5	919 aa		5.08	□□□□□ -1.6
LINC00649-219	ENST00000622171	RSPH10B2	B2RC85	870 aa		5.08	□□□□□ -1.6
LINC00649-219	ENST00000622171	PIK3CD	O00329	1044 aa		5.08	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms