RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 ZKSCAN5Q9Y2L8 839 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 LUC7L2Q9Y383 392 aaKnown RBP13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 PITPNM2Q9BZ72 1349 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 MARK3P27448 753 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 CATSPERGQ6ZRH7 1159 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 DEPTORQ8TB45 409 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 SLC7A3Q8WY07 619 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 PARK7Q99497 189 aaKnown RBP13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 SH2D3AQ9BRG2 576 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 BEGAINQ9BUH8 593 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 ASCC2Q9H1I8 757 aaPredicted RBP13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 PARVGQ9HBI0 331 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 GABBR1Q9UBS5 961 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 ARP10275 920 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 ADAM9Q13443 819 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 PTPN14Q15678 1187 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 CCDC181Q5TID7 509 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 SLC30A10Q6XR72 485 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 SIAH1Q8IUQ4 282 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 TRIM9Q9C026 710 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 DMP1Q13316 513 aaPredicted RBP13.4□□□□□ -0.26
TMEM170A-205ENST00000568559 MYH7P12883 1935 aa13.4□□□□□ -0.26
TMEM170A-205ENST00000568559 PRCPP42785 496 aa13.4□□□□□ -0.26
TMEM170A-205ENST00000568559 SLC35G1Q2M3R5 365 aa13.4□□□□□ -0.26
TMEM170A-205ENST00000568559 SPATC1LQ9H0A9 340 aa13.4□□□□□ -0.26
TMEM170A-205ENST00000568559 LRRIQ4A6NIV6 560 aa13.4□□□□□ -0.26
TMEM170A-205ENST00000568559 FAM86B1E9PN63 330 aa13.4□□□□□ -0.26
TMEM170A-205ENST00000568559 PHACTR2O75167 634 aa13.4□□□□□ -0.26
TMEM170A-205ENST00000568559 FAM86B2P0C5J1 330 aa13.4□□□□□ -0.26
TMEM170A-205ENST00000568559 GAP43P17677 238 aa13.4□□□□□ -0.26
TMEM170A-205ENST00000568559 MOXD1Q6UVY6 613 aa13.4□□□□□ -0.26
TMEM170A-205ENST00000568559 CCDC112Q8NEF3 446 aa13.4□□□□□ -0.26
TMEM170A-205ENST00000568559 TNFRSF25Q93038 417 aa13.4□□□□□ -0.26
TMEM170A-205ENST00000568559 TEPSINQ96N21 525 aa13.4□□□□□ -0.26
TMEM170A-205ENST00000568559 RWDD2AQ9UIY3 292 aa13.4□□□□□ -0.26
TMEM170A-205ENST00000568559 PCDHA10Q9Y5I2 948 aa13.4□□□□□ -0.26
TMEM170A-205ENST00000568559 PFASO15067 1338 aa13.4□□□□□ -0.26
TMEM170A-205ENST00000568559 CHD4Q14839 1912 aa13.4□□□□□ -0.26
TMEM170A-205ENST00000568559 COL24A1Q17RW2 1714 aa13.4□□□□□ -0.26
TMEM170A-205ENST00000568559 AKR1B15C9JRZ8 316 aaPredicted RBP13.4□□□□□ -0.27
TMEM170A-205ENST00000568559 PGK2P07205 417 aa13.4□□□□□ -0.27
TMEM170A-205ENST00000568559 CCNE1P24864 410 aa13.4□□□□□ -0.27
TMEM170A-205ENST00000568559 SFNP31947 248 aa13.4□□□□□ -0.27
TMEM170A-205ENST00000568559 NEDD9Q14511 834 aa13.4□□□□□ -0.27
TMEM170A-205ENST00000568559 PADI6Q6TGC4 694 aa13.4□□□□□ -0.27
TMEM170A-205ENST00000568559 CYFIP1Q7L576 1253 aa13.4□□□□□ -0.27
TMEM170A-205ENST00000568559 HPS3Q969F9 1004 aa13.4□□□□□ -0.27
TMEM170A-205ENST00000568559 PVALEFA0A1B0GWK0 134 aa13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 AKR1B10O60218 316 aa13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 CYP2C8P10632 490 aa13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 TNNT3P45378 269 aaPredicted RBP13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 DPYDQ12882 1025 aa13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 PSMD2Q13200 908 aa13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 PRPF4BQ13523 1007 aaKnown RBP13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 JPH1Q9HDC5 661 aaPredicted RBP13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 SLC9A2Q9UBY0 812 aa13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 TRIM49BA6NDI0 452 aa13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 KIAA1755Q5JYT7 1200 aa13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 VPS36Q86VN1 386 aa13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 SFR1Q86XK3 245 aa13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 NEK9Q8TD19 979 aa13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 MRFAP1L1Q96HT8 127 aa13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 PDCD2LQ9BRP1 358 aa13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 TUBE1Q9UJT0 475 aa13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 PRPF6O94906 941 aaKnown RBP13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 PSMC5P62195 406 aa13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 NCBP1Q09161 790 aaKnown RBP13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 PPIL2Q13356 520 aa13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 HS1BP3Q53T59 392 aa13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 SPECC1LQ69YQ0 1117 aa13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 CATSPER3Q86XQ3 398 aa13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 IWS1Q96ST2 819 aa13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 RIT2Q99578 217 aa13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 SGIP1Q9BQI5 828 aa13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 MAP3K20Q9NYL2 800 aaKnown RBP13.39□□□□□ -0.27
TMEM170A-205ENST00000568559 NPHP3-ACAD11A0A0J9YXS1 232 aa13.38□□□□□ -0.27
TMEM170A-205ENST00000568559 PDHXO00330 501 aa13.38□□□□□ -0.27
TMEM170A-205ENST00000568559 GJC1P36383 396 aa13.38□□□□□ -0.27
TMEM170A-205ENST00000568559 COASYQ13057 564 aa13.38□□□□□ -0.27
TMEM170A-205ENST00000568559 CNGA4Q8IV77 575 aa13.38□□□□□ -0.27
TMEM170A-205ENST00000568559 MYMKA6NI61 221 aa13.38□□□□□ -0.27
TMEM170A-205ENST00000568559 NR2F2P24468 414 aa13.38□□□□□ -0.27
TMEM170A-205ENST00000568559 PTPROQ16827 1216 aa13.38□□□□□ -0.27
TMEM170A-205ENST00000568559 CCDC70Q6NSX1 233 aa13.38□□□□□ -0.27
TMEM170A-205ENST00000568559 ILDR2Q71H61 639 aa13.38□□□□□ -0.27
TMEM170A-205ENST00000568559 PROCA1Q8NCQ7 364 aaPredicted RBP13.38□□□□□ -0.27
TMEM170A-205ENST00000568559 CNOT6LQ96LI5 555 aaKnown RBP13.38□□□□□ -0.27
TMEM170A-205ENST00000568559 PPP1R9BQ96SB3 815 aa13.38□□□□□ -0.27
TMEM170A-205ENST00000568559 SPC25Q9HBM1 224 aa13.38□□□□□ -0.27
TMEM170A-205ENST00000568559 PXMP2Q9NR77 195 aa13.38□□□□□ -0.27
TMEM170A-205ENST00000568559 KCNG1Q9UIX4 513 aa13.38□□□□□ -0.27
TMEM170A-205ENST00000568559 ASB14A6NK59 587 aa13.38□□□□□ -0.27
TMEM170A-205ENST00000568559 PHF20L1A8MW92 1017 aa13.38□□□□□ -0.27
TMEM170A-205ENST00000568559 CLIC2O15247 247 aa13.38□□□□□ -0.27
TMEM170A-205ENST00000568559 RPA1P27694 616 aa13.38□□□□□ -0.27
TMEM170A-205ENST00000568559 TTLL4Q14679 1199 aa13.38□□□□□ -0.27
TMEM170A-205ENST00000568559 TREML2Q5T2D2 321 aa13.38□□□□□ -0.27
TMEM170A-205ENST00000568559 GIMAP8Q8ND71 665 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms