RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 RALGAPBQ86X10 1494 aa5.95□□□□□ -1.46
CLDND1-228ENST00000513873 PNPLA6Q8IY17 1366 aa5.94□□□□□ -1.46
CLDND1-228ENST00000513873 PRAG1Q86YV5 1406 aa5.94□□□□□ -1.46
CLDND1-228ENST00000513873 CCER2I3L3R5 266 aa5.94□□□□□ -1.46
CLDND1-228ENST00000513873 SCG5P05408 212 aa5.94□□□□□ -1.46
CLDND1-228ENST00000513873 TACR1P25103 407 aa5.94□□□□□ -1.46
CLDND1-228ENST00000513873 GTF2A2P52657 109 aa5.94□□□□□ -1.46
CLDND1-228ENST00000513873 GFRA1P56159 465 aa5.94□□□□□ -1.46
CLDND1-228ENST00000513873 RPL11P62913 178 aaKnown RBP5.94□□□□□ -1.46
CLDND1-228ENST00000513873 MVKQ03426 396 aa5.94□□□□□ -1.46
CLDND1-228ENST00000513873 SERINC3Q13530 473 aa5.94□□□□□ -1.46
CLDND1-228ENST00000513873 NR1I3Q14994 352 aa5.94□□□□□ -1.46
CLDND1-228ENST00000513873 FRS2Q8WU20 508 aa5.94□□□□□ -1.46
CLDND1-228ENST00000513873 KCNN1Q92952 543 aa5.94□□□□□ -1.46
CLDND1-228ENST00000513873 SHISA4Q96DD7 197 aa5.94□□□□□ -1.46
CLDND1-228ENST00000513873 ZSWIM4Q9H7M6 989 aa5.94□□□□□ -1.46
CLDND1-228ENST00000513873 SIRT5Q9NXA8 310 aa5.94□□□□□ -1.46
CLDND1-228ENST00000513873 BTG4Q9NY30 223 aa5.94□□□□□ -1.46
CLDND1-228ENST00000513873 SNTG2Q9NY99 539 aa5.94□□□□□ -1.46
CLDND1-228ENST00000513873 TIMM13Q9Y5L4 95 aaPredicted RBP5.94□□□□□ -1.46
CLDND1-228ENST00000513873 KDM2BQ8NHM5 1336 aa5.94□□□□□ -1.46
CLDND1-228ENST00000513873 EFCAB6Q5THR3 1501 aa5.94□□□□□ -1.46
CLDND1-228ENST00000513873 CEP152O94986 1710 aa5.94□□□□□ -1.46
CLDND1-228ENST00000513873 MARF1Q9Y4F3 1742 aaKnown RBP5.94□□□□□ -1.46
CLDND1-228ENST00000513873 PTCH1Q13635 1447 aa5.93□□□□□ -1.46
CLDND1-228ENST00000513873 SPATA31E1Q6ZUB1 1445 aa5.93□□□□□ -1.46
CLDND1-228ENST00000513873 C7orf72A4D263 438 aa5.93□□□□□ -1.46
CLDND1-228ENST00000513873 NUDT19A8MXV4 375 aa5.93□□□□□ -1.46
CLDND1-228ENST00000513873 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.93□□□□□ -1.46
CLDND1-228ENST00000513873 FGFR1P11362 822 aa5.93□□□□□ -1.46
CLDND1-228ENST00000513873 PABPC1P11940 636 aaKnown RBP5.93□□□□□ -1.46
CLDND1-228ENST00000513873 HOXA5P20719 270 aa5.93□□□□□ -1.46
CLDND1-228ENST00000513873 LTBRP36941 435 aa5.93□□□□□ -1.46
CLDND1-228ENST00000513873 ERVFRD-1P60508 538 aa5.93□□□□□ -1.46
CLDND1-228ENST00000513873 MAP4K2Q12851 820 aa5.93□□□□□ -1.46
CLDND1-228ENST00000513873 ACBD5Q5T8D3 534 aaPredicted RBP5.93□□□□□ -1.46
CLDND1-228ENST00000513873 SPATC1Q76KD6 591 aa5.93□□□□□ -1.46
CLDND1-228ENST00000513873 TMEM145Q8NBT3 493 aa5.93□□□□□ -1.46
CLDND1-228ENST00000513873 ZNF552Q9H707 407 aaPredicted RBP5.93□□□□□ -1.46
CLDND1-228ENST00000513873 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.93□□□□□ -1.462e-6■■■■□ 23.6
CLDND1-228ENST00000513873 GULP1Q9UBP9 304 aa5.93□□□□□ -1.46
CLDND1-228ENST00000513873 NUDT5Q9UKK9 219 aa5.93□□□□□ -1.46
CLDND1-228ENST00000513873 RWDD3Q9Y3V2 267 aa5.93□□□□□ -1.46
CLDND1-228ENST00000513873 ASXL1Q8IXJ9 1541 aa5.93□□□□□ -1.46
CLDND1-228ENST00000513873 GPRASP1Q5JY77 1395 aa5.93□□□□□ -1.46
CLDND1-228ENST00000513873 DCCP43146 1447 aa5.92□□□□□ -1.46
CLDND1-228ENST00000513873 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.92□□□□□ -1.46
CLDND1-228ENST00000513873 FUCA1P04066 466 aa5.92□□□□□ -1.46
CLDND1-228ENST00000513873 SDHBP21912 280 aa5.92□□□□□ -1.46
CLDND1-228ENST00000513873 GRIA2P42262 883 aa5.92□□□□□ -1.46
CLDND1-228ENST00000513873 BMS1Q14692 1282 aaKnown RBP5.92□□□□□ -1.46
CLDND1-228ENST00000513873 KIR3DS1Q14943 382 aa5.92□□□□□ -1.46
CLDND1-228ENST00000513873 SF1Q15637 639 aaKnown RBP5.92□□□□□ -1.46
CLDND1-228ENST00000513873 PRSS53Q2L4Q9 553 aa5.92□□□□□ -1.46
CLDND1-228ENST00000513873 ZC3H12BQ5HYM0 836 aaKnown RBP5.92□□□□□ -1.46
CLDND1-228ENST00000513873 PAQR3Q6TCH7 311 aa5.92□□□□□ -1.46
CLDND1-228ENST00000513873 USP53Q70EK8 1073 aa5.92□□□□□ -1.46
CLDND1-228ENST00000513873 SCUBE1Q8IWY4 988 aa5.92□□□□□ -1.46
CLDND1-228ENST00000513873 ZBTB38Q8NAP3 1195 aaPredicted RBP5.92□□□□□ -1.46
CLDND1-228ENST00000513873 NPLOC4Q8TAT6 608 aa5.92□□□□□ -1.46
CLDND1-228ENST00000513873 DNAJC7Q99615 494 aa5.92□□□□□ -1.46
CLDND1-228ENST00000513873 TBX22Q9Y458 520 aa5.92□□□□□ -1.46
CLDND1-228ENST00000513873 CCDC7Q96M83 1385 aa5.92□□□□□ -1.46
CLDND1-228ENST00000513873 NOS1P29475 1434 aa5.91□□□□□ -1.46
CLDND1-228ENST00000513873 ST20-MTHFSA0A0A6YYL1 179 aa5.91□□□□□ -1.46
CLDND1-228ENST00000513873 HRKO00198 91 aa5.91□□□□□ -1.46
CLDND1-228ENST00000513873 PEX10O60683 326 aa5.91□□□□□ -1.46
CLDND1-228ENST00000513873 CYBBP04839 570 aa5.91□□□□□ -1.46
CLDND1-228ENST00000513873 SYN1P17600 705 aa5.91□□□□□ -1.46
CLDND1-228ENST00000513873 SRSF3P84103 164 aaKnown RBP5.91□□□□□ -1.46
CLDND1-228ENST00000513873 IDI1Q13907 227 aa5.91□□□□□ -1.46
CLDND1-228ENST00000513873 RASA3Q14644 834 aa5.91□□□□□ -1.46
CLDND1-228ENST00000513873 KCNA10Q16322 511 aa5.91□□□□□ -1.46
CLDND1-228ENST00000513873 DCAF4Q8WV16 495 aa5.91□□□□□ -1.46
CLDND1-228ENST00000513873 TRMT2BQ96GJ1 504 aaKnown RBP5.91□□□□□ -1.46
CLDND1-228ENST00000513873 TMEM169Q96HH4 297 aa5.91□□□□□ -1.46
CLDND1-228ENST00000513873 POLR3GLQ9BT43 218 aa5.91□□□□□ -1.46
CLDND1-228ENST00000513873 ARHGEF4Q9NR80 690 aa5.91□□□□□ -1.46
CLDND1-228ENST00000513873 MARCH2Q9P0N8 246 aa5.91□□□□□ -1.46
CLDND1-228ENST00000513873 COA3Q9Y2R0 106 aaPredicted RBP5.91□□□□□ -1.46
CLDND1-228ENST00000513873 PCDHA2Q9Y5H9 948 aa5.91□□□□□ -1.46
CLDND1-228ENST00000513873 WASHC2AQ641Q2 1341 aa5.91□□□□□ -1.46
CLDND1-228ENST00000513873 KTN1Q86UP2 1357 aaKnown RBP5.91□□□□□ -1.46
CLDND1-228ENST00000513873 MYOM2P54296 1465 aa5.9□□□□□ -1.46
CLDND1-228ENST00000513873 UTRNP46939 3433 aa5.9□□□□□ -1.46
CLDND1-228ENST00000513873 LAMC1P11047 1609 aa5.9□□□□□ -1.46
CLDND1-228ENST00000513873 TRBV23-1A0A0A0MS06 115 aa5.9□□□□□ -1.46
CLDND1-228ENST00000513873 FAM221BA6H8Z2 402 aa5.9□□□□□ -1.46
CLDND1-228ENST00000513873 TCAF2A6NFQ2 919 aa5.9□□□□□ -1.46
CLDND1-228ENST00000513873 F8W031 263 aaPredicted RBP5.9□□□□□ -1.46
CLDND1-228ENST00000513873 FOXD2O60548 495 aaPredicted RBP5.9□□□□□ -1.46
CLDND1-228ENST00000513873 MSL3P1P0C860 447 aa5.9□□□□□ -1.46
CLDND1-228ENST00000513873 R3HDM1Q15032 1099 aaKnown RBP5.9□□□□□ -1.46
CLDND1-228ENST00000513873 LONRF2Q1L5Z9 754 aa5.9□□□□□ -1.46
CLDND1-228ENST00000513873 CCDC144BQ3MJ40 725 aa5.9□□□□□ -1.46
CLDND1-228ENST00000513873 SLC35F1Q5T1Q4 408 aa5.9□□□□□ -1.46
CLDND1-228ENST00000513873 ZC3H14Q6PJT7 736 aaKnown RBP5.9□□□□□ -1.46
CLDND1-228ENST00000513873 CEP68Q76N32 757 aa5.9□□□□□ -1.46
CLDND1-228ENST00000513873 KREMEN2Q8NCW0 462 aa5.9□□□□□ -1.46
CLDND1-228ENST00000513873 PEX11GQ96HA9 241 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms