RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 LRRC2Q9BYS8 371 aa28.49■■■□□ 2.15
PKD1-211ENST00000474088 TCF20Q9UGU0 1960 aaKnown RBP28.48■■■□□ 2.15
PKD1-211ENST00000474088 hCG_1642624A0A1W2PR95 340 aa28.48■■■□□ 2.15
PKD1-211ENST00000474088 ITGB5P18084 799 aa28.48■■■□□ 2.15
PKD1-211ENST00000474088 TCF7P36402 384 aaPredicted RBP28.48■■■□□ 2.15
PKD1-211ENST00000474088 FAM26DQ5JW98 314 aa28.48■■■□□ 2.15
PKD1-211ENST00000474088 ANO2Q9NQ90 1003 aa28.48■■■□□ 2.15
PKD1-211ENST00000474088 NRCAMQ92823 1304 aa28.47■■■□□ 2.15
PKD1-211ENST00000474088 KCNA2P16389 499 aa28.47■■■□□ 2.15
PKD1-211ENST00000474088 SP7Q8TDD2 431 aaPredicted RBP28.47■■■□□ 2.15
PKD1-211ENST00000474088 SEPT1Q8WYJ6 367 aa28.47■■■□□ 2.15
PKD1-211ENST00000474088 TOP1MTQ969P6 601 aa28.47■■■□□ 2.15
PKD1-211ENST00000474088 C17orf80Q9BSJ5 609 aa28.47■■■□□ 2.15
PKD1-211ENST00000474088 UBIAD1Q9Y5Z9 338 aa28.47■■■□□ 2.15
PKD1-211ENST00000474088 TRANK1O15050 2925 aa28.46■■■□□ 2.15
PKD1-211ENST00000474088 REV3LO60673 3130 aa28.46■■■□□ 2.15
PKD1-211ENST00000474088 UBE2SQ16763 222 aa28.46■■■□□ 2.15
PKD1-211ENST00000474088 TMTC3Q6ZXV5 915 aa28.46■■■□□ 2.15
PKD1-211ENST00000474088 SGMS1Q86VZ5 419 aa28.46■■■□□ 2.15
PKD1-211ENST00000474088 PCDHA6Q9UN73 950 aa28.46■■■□□ 2.15
PKD1-211ENST00000474088 PCDHA8Q9Y5H6 950 aa28.46■■■□□ 2.15
PKD1-211ENST00000474088 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.45■■■□□ 2.14
PKD1-211ENST00000474088 GSTTP1A0A1W2PQM5 241 aa28.45■■■□□ 2.14
PKD1-211ENST00000474088 SPDYE3A6NKU9 549 aa28.45■■■□□ 2.14
PKD1-211ENST00000474088 FBXO22Q8NEZ5 403 aa28.45■■■□□ 2.14
PKD1-211ENST00000474088 APBB2Q92870 758 aa28.45■■■□□ 2.14
PKD1-211ENST00000474088 MICAL3Q7RTP6 2002 aa28.45■■■□□ 2.14
PKD1-211ENST00000474088 MAFGO15525 162 aa28.44■■■□□ 2.14
PKD1-211ENST00000474088 MTMR1Q13613 665 aa28.44■■■□□ 2.14
PKD1-211ENST00000474088 JADE2Q9NQC1 790 aa28.44■■■□□ 2.14
PKD1-211ENST00000474088 SIP14410 1827 aa28.43■■■□□ 2.14
PKD1-211ENST00000474088 UPP2O95045 317 aa28.43■■■□□ 2.14
PKD1-211ENST00000474088 CHRNA1P02708 482 aa28.43■■■□□ 2.14
PKD1-211ENST00000474088 COL9A1P20849 921 aa28.43■■■□□ 2.14
PKD1-211ENST00000474088 SYNE3Q6ZMZ3 975 aa28.43■■■□□ 2.14
PKD1-211ENST00000474088 HEATR3Q7Z4Q2 680 aa28.43■■■□□ 2.14
PKD1-211ENST00000474088 RPAINQ86UA6 219 aa28.43■■■□□ 2.14
PKD1-211ENST00000474088 MICU3Q86XE3 530 aa28.43■■■□□ 2.14
PKD1-211ENST00000474088 ERAP1Q9NZ08 941 aa28.43■■■□□ 2.14
PKD1-211ENST00000474088 RNF20Q5VTR2 975 aa28.42■■■□□ 2.14
PKD1-211ENST00000474088 TAF2Q6P1X5 1199 aa28.42■■■□□ 2.14
PKD1-211ENST00000474088 RUFY4Q6ZNE9 571 aa28.42■■■□□ 2.14
PKD1-211ENST00000474088 SAMD11Q96NU1 681 aa28.42■■■□□ 2.14
PKD1-211ENST00000474088 YME1L1Q96TA2 773 aa28.42■■■□□ 2.14
PKD1-211ENST00000474088 IFIH1Q9BYX4 1025 aaKnown RBP28.42■■■□□ 2.14
PKD1-211ENST00000474088 PKD2L1Q9P0L9 805 aa28.42■■■□□ 2.14
PKD1-211ENST00000474088 MUC3AQ02505 3323 aa28.41■■■□□ 2.14
PKD1-211ENST00000474088 PPFIA1Q13136 1202 aa28.41■■■□□ 2.14
PKD1-211ENST00000474088 EPC2Q52LR7 807 aa28.41■■■□□ 2.14
PKD1-211ENST00000474088 GLG1Q92896 1179 aa28.41■■■□□ 2.14
PKD1-211ENST00000474088 NEK1Q96PY6 1258 aa28.41■■■□□ 2.14
PKD1-211ENST00000474088 SMARCAD1Q9H4L7 1026 aa28.41■■■□□ 2.14
PKD1-211ENST00000474088 MARK3P27448 753 aa28.4■■■□□ 2.14
PKD1-211ENST00000474088 GRIK4Q16099 956 aa28.4■■■□□ 2.14
PKD1-211ENST00000474088 BMP2KLQ5H9B9 411 aa28.4■■■□□ 2.14
PKD1-211ENST00000474088 APOA5Q6Q788 366 aa28.4■■■□□ 2.14
PKD1-211ENST00000474088 EHMT1Q9H9B1 1298 aa28.4■■■□□ 2.14
PKD1-211ENST00000474088 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.39■■■□□ 2.14
PKD1-211ENST00000474088 EXOSC10Q01780 885 aaKnown RBP28.39■■■□□ 2.14
PKD1-211ENST00000474088 WWC2Q6AWC2 1192 aa28.39■■■□□ 2.14
PKD1-211ENST00000474088 RSPH3Q86UC2 560 aa28.39■■■□□ 2.14
PKD1-211ENST00000474088 RBM28Q9NW13 759 aaKnown RBP28.39■■■□□ 2.14
PKD1-211ENST00000474088 TUBE1Q9UJT0 475 aa28.39■■■□□ 2.14
PKD1-211ENST00000474088 MBLAC1A4D2B0 266 aaPredicted RBP28.38■■■□□ 2.13
PKD1-211ENST00000474088 MGAT3Q09327 533 aa28.38■■■□□ 2.13
PKD1-211ENST00000474088 MARCH8Q5T0T0 291 aa28.38■■■□□ 2.13
PKD1-211ENST00000474088 MRPL38Q96DV4 380 aaKnown RBP28.38■■■□□ 2.13
PKD1-211ENST00000474088 MXRA8Q9BRK3 442 aa28.38■■■□□ 2.13
PKD1-211ENST00000474088 UBE2ZQ9H832 354 aaPredicted RBP28.38■■■□□ 2.13
PKD1-211ENST00000474088 XIRP2A4UGR9 3374 aa28.38■■■□□ 2.13
PKD1-211ENST00000474088 CNTNAP5Q8WYK1 1306 aa28.38■■■□□ 2.13
PKD1-211ENST00000474088 H3BNC9 293 aa28.37■■■□□ 2.13
PKD1-211ENST00000474088 GHRP10912 638 aa28.37■■■□□ 2.13
PKD1-211ENST00000474088 PTPROQ16827 1216 aa28.37■■■□□ 2.13
PKD1-211ENST00000474088 TYW1BQ6NUM6 668 aa28.37■■■□□ 2.13
PKD1-211ENST00000474088 TMEM192Q8IY95 271 aa28.37■■■□□ 2.13
PKD1-211ENST00000474088 DNAJB3Q8WWF6 145 aa28.37■■■□□ 2.13
PKD1-211ENST00000474088 JPH1Q9HDC5 661 aaPredicted RBP28.37■■■□□ 2.13
PKD1-211ENST00000474088 RIC8AQ9NPQ8 531 aa28.37■■■□□ 2.13
PKD1-211ENST00000474088 KCNH7Q9NS40 1196 aa28.37■■■□□ 2.13
PKD1-211ENST00000474088 BRPF3Q9ULD4 1205 aa28.37■■■□□ 2.13
PKD1-211ENST00000474088 NAPAP54920 295 aa28.36■■■□□ 2.13
PKD1-211ENST00000474088 FUT2Q10981 343 aa28.36■■■□□ 2.13
PKD1-211ENST00000474088 GPM6BQ13491 265 aa28.36■■■□□ 2.13
PKD1-211ENST00000474088 LPIN1Q14693 890 aa28.36■■■□□ 2.13
PKD1-211ENST00000474088 DHX32Q7L7V1 743 aaKnown RBP28.36■■■□□ 2.13
PKD1-211ENST00000474088 SKAP1Q86WV1 359 aa28.36■■■□□ 2.13
PKD1-211ENST00000474088 TEX2Q8IWB9 1127 aa28.36■■■□□ 2.13
PKD1-211ENST00000474088 CYP2W1Q8TAV3 490 aa28.36■■■□□ 2.13
PKD1-211ENST00000474088 IL17RAQ96F46 866 aa28.36■■■□□ 2.13
PKD1-211ENST00000474088 TCEANC2Q96MN5 208 aa28.36■■■□□ 2.13
PKD1-211ENST00000474088 PCYT2Q99447 389 aa28.36■■■□□ 2.13
PKD1-211ENST00000474088 C1QTNF1Q9BXJ1 281 aa28.36■■■□□ 2.13
PKD1-211ENST00000474088 SLC9A2Q9UBY0 812 aa28.36■■■□□ 2.13
PKD1-211ENST00000474088 KAT6AQ92794 2004 aa28.35■■■□□ 2.13
PKD1-211ENST00000474088 TSGA10IPQ3SY00 556 aa28.35■■■□□ 2.13
PKD1-211ENST00000474088 V9GY48 417 aaPredicted RBP28.35■■■□□ 2.13
PKD1-211ENST00000474088 COL4A6Q14031 1691 aa28.35■■■□□ 2.13
PKD1-211ENST00000474088 RRN3P2A6NIE6 340 aa28.34■■■□□ 2.13
PKD1-211ENST00000474088 ZBTB43O43298 467 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms