RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 ZNF891A8MT65 544 aaPredicted RBP8.11□□□□□ -1.11
CLK1-209ENST00000472679 YBX3P16989 372 aaKnown RBP eCLIP8.11□□□□□ -1.11
CLK1-209ENST00000472679 PFKLP17858 780 aa8.11□□□□□ -1.11
CLK1-209ENST00000472679 PTPN1P18031 435 aaKnown RBP8.11□□□□□ -1.11
CLK1-209ENST00000472679 SSPNQ14714 243 aa8.11□□□□□ -1.11
CLK1-209ENST00000472679 ZNF124Q15973 351 aa8.11□□□□□ -1.11
CLK1-209ENST00000472679 PAN2Q504Q3 1202 aaKnown RBP8.11□□□□□ -1.11
CLK1-209ENST00000472679 BTBD8Q5XKL5 378 aa8.11□□□□□ -1.11
CLK1-209ENST00000472679 TEPPQ6URK8 271 aa8.11□□□□□ -1.11
CLK1-209ENST00000472679 B3GNT8Q7Z7M8 397 aa8.11□□□□□ -1.11
CLK1-209ENST00000472679 RNF180Q86T96 592 aa8.11□□□□□ -1.11
CLK1-209ENST00000472679 NXPE1Q8N323 547 aa8.11□□□□□ -1.11
CLK1-209ENST00000472679 PPM1KQ8N3J5 372 aa8.11□□□□□ -1.11
CLK1-209ENST00000472679 LEO1Q8WVC0 666 aaPredicted RBP8.11□□□□□ -1.11
CLK1-209ENST00000472679 DDX11Q96FC9 970 aa8.11□□□□□ -1.11
CLK1-209ENST00000472679 ORAI3Q9BRQ5 295 aa8.11□□□□□ -1.11
CLK1-209ENST00000472679 EPB41L4AQ9HCS5 686 aaPredicted RBP8.11□□□□□ -1.11
CLK1-209ENST00000472679 RIC8BQ9NVN3 520 aa8.11□□□□□ -1.11
CLK1-209ENST00000472679 B4GALT6Q9UBX8 382 aa8.11□□□□□ -1.11
CLK1-209ENST00000472679 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.1□□□□□ -1.11
CLK1-209ENST00000472679 SLC12A8A0AV02 714 aa8.1□□□□□ -1.11
CLK1-209ENST00000472679 SCDO00767 359 aa8.1□□□□□ -1.11
CLK1-209ENST00000472679 CLASP2O75122 1294 aaKnown RBP8.1□□□□□ -1.11
CLK1-209ENST00000472679 KRT37O76014 449 aa8.1□□□□□ -1.11
CLK1-209ENST00000472679 FAHP16930 419 aa8.1□□□□□ -1.11
CLK1-209ENST00000472679 FOXO4P98177 505 aa8.1□□□□□ -1.11
CLK1-209ENST00000472679 EP400NLQ6ZTU2 488 aa8.1□□□□□ -1.11
CLK1-209ENST00000472679 SIGLEC10Q96LC7 697 aa8.1□□□□□ -1.11
CLK1-209ENST00000472679 NOX5Q96PH1 765 aa8.1□□□□□ -1.11
CLK1-209ENST00000472679 SLC38A3Q99624 504 aa8.1□□□□□ -1.11
CLK1-209ENST00000472679 CABP5Q9NP86 173 aa8.1□□□□□ -1.11
CLK1-209ENST00000472679 SMG5Q9UPR3 1016 aaKnown RBP8.1□□□□□ -1.11
CLK1-209ENST00000472679 MAPRE3Q9UPY8 281 aa8.1□□□□□ -1.11
CLK1-209ENST00000472679 NFIBO00712 420 aa8.09□□□□□ -1.11
CLK1-209ENST00000472679 C4BPAP04003 597 aaKnown RBP8.09□□□□□ -1.11
CLK1-209ENST00000472679 STAT3P40763 770 aa8.09□□□□□ -1.11
CLK1-209ENST00000472679 IRF9Q00978 393 aa8.09□□□□□ -1.11
CLK1-209ENST00000472679 STK32CQ86UX6 486 aa8.09□□□□□ -1.11
CLK1-209ENST00000472679 ANKLE2Q86XL3 938 aa8.09□□□□□ -1.11
CLK1-209ENST00000472679 PROSER1Q86XN7 944 aa8.09□□□□□ -1.11
CLK1-209ENST00000472679 AHI1Q8N157 1196 aa8.09□□□□□ -1.11
CLK1-209ENST00000472679 PPP1R16BQ96T49 567 aa8.09□□□□□ -1.11
CLK1-209ENST00000472679 CD320Q9NPF0 282 aa8.09□□□□□ -1.11
CLK1-209ENST00000472679 FAN1Q9Y2M0 1017 aa8.09□□□□□ -1.11
CLK1-209ENST00000472679 IRAK3Q9Y616 596 aa8.09□□□□□ -1.11
CLK1-209ENST00000472679 TCAF2A6NFQ2 919 aa8.08□□□□□ -1.12
CLK1-209ENST00000472679 DVL2O14641 736 aa8.08□□□□□ -1.12
CLK1-209ENST00000472679 TSPAN15O95858 294 aa8.08□□□□□ -1.12
CLK1-209ENST00000472679 F2P00734 622 aa8.08□□□□□ -1.12
CLK1-209ENST00000472679 PLA2G1BP04054 148 aaKnown RBP8.08□□□□□ -1.12
CLK1-209ENST00000472679 VIL1P09327 827 aaKnown RBP8.08□□□□□ -1.12
CLK1-209ENST00000472679 CYP2C8P10632 490 aa8.08□□□□□ -1.12
CLK1-209ENST00000472679 PI3P19957 117 aa8.08□□□□□ -1.12
CLK1-209ENST00000472679 DSG1Q02413 1049 aa8.08□□□□□ -1.12
CLK1-209ENST00000472679 ARHGAP44Q17R89 818 aa8.08□□□□□ -1.12
CLK1-209ENST00000472679 CREB3L3Q68CJ9 461 aa8.08□□□□□ -1.12
CLK1-209ENST00000472679 STRA8Q7Z7C7 330 aa8.08□□□□□ -1.12
CLK1-209ENST00000472679 DLG3Q92796 817 aa8.08□□□□□ -1.12
CLK1-209ENST00000472679 GORASP1Q9BQQ3 440 aa8.08□□□□□ -1.12
CLK1-209ENST00000472679 BOCQ9BWV1 1114 aa8.08□□□□□ -1.12
CLK1-209ENST00000472679 PRKAB1Q9Y478 270 aa8.08□□□□□ -1.12
CLK1-209ENST00000472679 B3GALT1Q9Y5Z6 326 aa8.08□□□□□ -1.12
CLK1-209ENST00000472679 ATP2A2P16615 1042 aaKnown RBP8.07□□□□□ -1.12
CLK1-209ENST00000472679 THBS2P35442 1172 aa8.07□□□□□ -1.12
CLK1-209ENST00000472679 NKX3-2P78367 333 aa8.07□□□□□ -1.12
CLK1-209ENST00000472679 LIPIQ6XZB0 460 aa8.07□□□□□ -1.12
CLK1-209ENST00000472679 FILIP1Q7Z7B0 1213 aa8.07□□□□□ -1.12
CLK1-209ENST00000472679 ZC3H18Q86VM9 953 aaKnown RBP8.07□□□□□ -1.12
CLK1-209ENST00000472679 FAM129CQ86XR2 697 aa8.07□□□□□ -1.12
CLK1-209ENST00000472679 KIF18BQ86Y91 864 aa8.07□□□□□ -1.12
CLK1-209ENST00000472679 CAAP1Q9H8G2 361 aa8.07□□□□□ -1.12
CLK1-209ENST00000472679 IFT57Q9NWB7 429 aa8.07□□□□□ -1.12
CLK1-209ENST00000472679 HSPBP1Q9NZL4 362 aa8.07□□□□□ -1.12
CLK1-209ENST00000472679 H2AFY2Q9P0M6 372 aaPredicted RBP8.07□□□□□ -1.12
CLK1-209ENST00000472679 KCTD3Q9Y597 815 aa8.07□□□□□ -1.12
CLK1-209ENST00000472679 C8AP07357 584 aa8.06□□□□□ -1.12
CLK1-209ENST00000472679 GJA4P35212 333 aa8.06□□□□□ -1.12
CLK1-209ENST00000472679 RAP1GAPP47736 663 aa8.06□□□□□ -1.12
CLK1-209ENST00000472679 TMC5Q6UXY8 1006 aa8.06□□□□□ -1.12
CLK1-209ENST00000472679 BHLHE22Q8NFJ8 381 aaPredicted RBP8.06□□□□□ -1.12
CLK1-209ENST00000472679 CHAC2Q8WUX2 184 aa8.06□□□□□ -1.12
CLK1-209ENST00000472679 FAM126AQ9BYI3 521 aaPredicted RBP8.06□□□□□ -1.12
CLK1-209ENST00000472679 SPC25Q9HBM1 224 aa8.06□□□□□ -1.12
CLK1-209ENST00000472679 KCNH7Q9NS40 1196 aa8.06□□□□□ -1.12
CLK1-209ENST00000472679 CNOT6Q9ULM6 557 aaKnown RBP8.06□□□□□ -1.12
CLK1-209ENST00000472679 PRAMEF25A6NGN4 478 aa8.05□□□□□ -1.12
CLK1-209ENST00000472679 RASSF10A6NK89 507 aa8.05□□□□□ -1.12
CLK1-209ENST00000472679 NPIPB6E9PJ23 425 aa8.05□□□□□ -1.12
CLK1-209ENST00000472679 DNAJC6O75061 913 aa8.05□□□□□ -1.12
CLK1-209ENST00000472679 TXKP42681 527 aa8.05□□□□□ -1.12
CLK1-209ENST00000472679 ITGA1P56199 1179 aa8.05□□□□□ -1.12
CLK1-209ENST00000472679 LINC00310P59036 64 aa8.05□□□□□ -1.12
CLK1-209ENST00000472679 TMEM132BQ14DG7 1078 aa8.05□□□□□ -1.12
CLK1-209ENST00000472679 CD276Q5ZPR3 534 aa8.05□□□□□ -1.12
CLK1-209ENST00000472679 KRT26Q7Z3Y9 468 aa8.05□□□□□ -1.12
CLK1-209ENST00000472679 CHTF18Q8WVB6 975 aa8.05□□□□□ -1.12
CLK1-209ENST00000472679 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.05□□□□□ -1.12
CLK1-209ENST00000472679 NGRNQ9NPE2 291 aaKnown RBP8.05□□□□□ -1.12
CLK1-209ENST00000472679 OXSMQ9NWU1 459 aa8.05□□□□□ -1.12
CLK1-209ENST00000472679 THG1LQ9NWX6 298 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms