RNA–Protein interactions for RNA: ENSMUST00000088171.10

Rtn3-204, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 4,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-204ENSMUST00000088171 Pou5f1P20263 352 aaKnown RBP11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Nr2f2P43135 414 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Ect2Q07139 913 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Nom1Q3UFM5 854 aaKnown RBP11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Tigd5Q499M4 642 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Trim52Q8CDV4 233 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 GrapQ9CX99 217 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 4921524L21RikQ9D5T2 438 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Znf654Q9DAU9 571 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Dip2aQ8BWT5 1523 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Lrrc32G3XA59 663 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Pja1O55176 578 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Atf2P16951 487 aaKnown RBP11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Actn4P57780 912 aaKnown RBP11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Agbl1Q09M05 972 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Nhej1Q3KNJ2 295 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Cdc37Q61081 379 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Pde1aQ61481 565 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 PigsQ6PD26 555 aaKnown RBP11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Vps37aQ8CHS8 397 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Armc9Q9D2I5 817 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Spata1Q9D5R4 444 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Map3k20Q9ESL4 802 aaKnown RBP11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Ccdc175E9PVB3 822 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Becn2P0DM65 447 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 InhbaQ04998 424 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Aldh1a2Q62148 518 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Stxbp2Q64324 593 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Ankrd24Q80VM7 985 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Cwf19l2Q8BG79 887 aaKnown RBP11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 MypopQ8R4U1 393 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Snx2Q9CWK8 519 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Akap8Q9DBR0 687 aaKnown RBP11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 PigbQ9JJQ0 542 aa11.34□□□□□ -0.59
Rtn3-204ENSMUST00000088171 Gm20425E9Q035 978 aaKnown RBP11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Gm6583E9Q8Z1 469 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Dsg3O35902 993 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 SrprbP47758 269 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Stmn1P54227 149 aaKnown RBP11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Krt26Q3TRJ4 462 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Znf12Q7TSI0 686 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Ric8bQ80XE1 520 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Kctd2Q8CEZ0 266 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Trim7Q923T7 510 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Ebag9Q9D0V7 213 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Krt34Q9D646 392 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Caln1Q9JJG7 219 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Eif2ak1Q9Z2R9 619 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Carmil3Q3UFQ8 1375 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Pcdhb9E9Q5G2 828 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Cyp2c23E9Q5K4 494 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Atg16l1Q8C0J2 607 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Ifi205aQ8CGE8 404 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Tada2aQ8CHV6 443 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Il31raQ8K5B1 716 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Ubxn11Q9D572 484 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Anapc7Q9WVM3 565 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Gm21083A0A0G2JFD5 256 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Cyp2j7A0A140T8U1 504 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 AdkP55264 361 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Mmp20P57748 482 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Mark2Q05512 776 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Me3Q8BMF3 604 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Slc38a7Q8BWH0 463 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Osbpl6Q8BXR9 959 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Cfap36Q8C6E0 343 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Pcdhb11Q91UZ8 797 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Vwa5aQ99KC8 793 aaKnown RBP11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 CrotQ9DC50 612 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Rps6kb2Q9Z1M4 485 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Lamc1P02468 1607 aaKnown RBP11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Aox2Q5SGK3 1345 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Timm44O35857 452 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Aifm3Q3TY86 605 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Acap3Q6NXL5 833 aa11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Rbm15bQ6PHZ5 887 aaKnown RBP11.33□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Adgrb2Q8CGM1 1561 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Spata31E9QAF0 1014 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Sema6bO54951 886 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Krt10P02535 570 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Gja8P28236 440 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Grin1P35438 938 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 NficP70255 439 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 S100a13P97352 98 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Gzf1Q4VBD9 706 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Acot5Q6Q2Z6 421 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Phf20Q8BLG0 1010 aaKnown RBP11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Cdk8Q8R3L8 464 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Apol7bB1AQP7 369 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Gm14525B1AZA0 212 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Gm2012B1B0R1 212 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 AU022751B1B0V2 589 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Pde6bP23440 856 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Dynll1P63168 89 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Khdrbs1Q60749 443 aaKnown RBP11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Gm14819Q62478 212 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Cand2Q6ZQ73 1235 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Zbtb41Q811F1 908 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Acvr1cQ8K348 493 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Ahi1Q8K3E5 1047 aa11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms