Protein–RNA interactions for Protein: Q8C6E0

Cfap36, Cilia- and flagella-associated protein 36, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap36Q8C6E0 Gm25239-201ENSMUST00000174915 86 ntBASIC37.31■■■■□ 3.56
Cfap36Q8C6E0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
Cfap36Q8C6E0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
Cfap36Q8C6E0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.63■■■■□ 3.13
Cfap36Q8C6E0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.17■■■■□ 3.06
Cfap36Q8C6E0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
Cfap36Q8C6E0 Psd-208ENSMUST00000224556 2034 ntBASIC33.44■■■□□ 2.94
Cfap36Q8C6E0 Gm15042-201ENSMUST00000120212 883 ntBASIC33.3■■■□□ 2.92
Cfap36Q8C6E0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Cfap36Q8C6E0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
Cfap36Q8C6E0 Gm15045-201ENSMUST00000117359 883 ntBASIC32.68■■■□□ 2.82
Cfap36Q8C6E0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Cfap36Q8C6E0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Cfap36Q8C6E0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.42■■■□□ 2.78
Cfap36Q8C6E0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Cfap36Q8C6E0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Cfap36Q8C6E0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Cfap36Q8C6E0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Cfap36Q8C6E0 Gm24109-201ENSMUST00000175489 103 ntBASIC32.01■■■□□ 2.71
Cfap36Q8C6E0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Cfap36Q8C6E0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Cfap36Q8C6E0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Cfap36Q8C6E0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Cfap36Q8C6E0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Cfap36Q8C6E0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.65
Cfap36Q8C6E0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Cfap36Q8C6E0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.48■■■□□ 2.63
Cfap36Q8C6E0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Cfap36Q8C6E0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Cfap36Q8C6E0 Gm23366-201ENSMUST00000175022 89 ntBASIC31.24■■■□□ 2.59
Cfap36Q8C6E0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Cfap36Q8C6E0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.21■■■□□ 2.59
Cfap36Q8C6E0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Cfap36Q8C6E0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Cfap36Q8C6E0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Cfap36Q8C6E0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Cfap36Q8C6E0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Cfap36Q8C6E0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Cfap36Q8C6E0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Cfap36Q8C6E0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
Cfap36Q8C6E0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
Cfap36Q8C6E0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.67■■■□□ 2.5
Cfap36Q8C6E0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.64■■■□□ 2.5
Cfap36Q8C6E0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.59■■■□□ 2.49
Cfap36Q8C6E0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
Cfap36Q8C6E0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Cfap36Q8C6E0 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.53■■■□□ 2.48
Cfap36Q8C6E0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Cfap36Q8C6E0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Cfap36Q8C6E0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Cfap36Q8C6E0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Cfap36Q8C6E0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Cfap36Q8C6E0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.98■■■□□ 2.39
Cfap36Q8C6E0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Cfap36Q8C6E0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Cfap36Q8C6E0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.84■■■□□ 2.37
Cfap36Q8C6E0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Cfap36Q8C6E0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Cfap36Q8C6E0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
Cfap36Q8C6E0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Cfap36Q8C6E0 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.68■■■□□ 2.34
Cfap36Q8C6E0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
Cfap36Q8C6E0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Cfap36Q8C6E0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.59■■■□□ 2.33
Cfap36Q8C6E0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
Cfap36Q8C6E0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.55■■■□□ 2.32
Cfap36Q8C6E0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Cfap36Q8C6E0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
Cfap36Q8C6E0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
Cfap36Q8C6E0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Cfap36Q8C6E0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Cfap36Q8C6E0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Cfap36Q8C6E0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Cfap36Q8C6E0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.39■■■□□ 2.3
Cfap36Q8C6E0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
Cfap36Q8C6E0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Cfap36Q8C6E0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Cfap36Q8C6E0 Gm27325-201ENSMUST00000175467 74 ntBASIC29.29■■■□□ 2.28
Cfap36Q8C6E0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Cfap36Q8C6E0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Cfap36Q8C6E0 Gm25238-201ENSMUST00000174914 89 ntBASIC29.22■■■□□ 2.27
Cfap36Q8C6E0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.16■■■□□ 2.26
Cfap36Q8C6E0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Cfap36Q8C6E0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.09■■■□□ 2.25
Cfap36Q8C6E0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Cfap36Q8C6E0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Cfap36Q8C6E0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.98■■■□□ 2.23
Cfap36Q8C6E0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Cfap36Q8C6E0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Cfap36Q8C6E0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
Cfap36Q8C6E0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Cfap36Q8C6E0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Cfap36Q8C6E0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Cfap36Q8C6E0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Cfap36Q8C6E0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.9■■■□□ 2.22
Cfap36Q8C6E0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Cfap36Q8C6E0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Cfap36Q8C6E0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Cfap36Q8C6E0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Cfap36Q8C6E0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 124 ms