RNA–Protein interactions for RNA: snR57

snR57, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR57, Length 88 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR57	snR57	HMS2	P47175	358 aa		4.58	□□□□□ -1.68
snR57	snR57	TAF12	Q03761	539 aa		4.58	□□□□□ -1.68
snR57	snR57	RRP12	Q12754	1228 aa	Known RBP	4.58	□□□□□ -1.68
snR57	snR57	YER078W-A	Q3E7A2	54 aa		4.58	□□□□□ -1.68
snR57	snR57	RAD61	Q99359	647 aa		4.58	□□□□□ -1.68
snR57	snR57	CBS2	P14905	389 aa		4.57	□□□□□ -1.68
snR57	snR57	LSB5	P25369	354 aa		4.57	□□□□□ -1.68
snR57	snR57	SPS22	P25380	463 aa		4.57	□□□□□ -1.68
snR57	snR57	ITR1	P30605	584 aa		4.57	□□□□□ -1.68
snR57	snR57	RGT1	P32862	1170 aa		4.57	□□□□□ -1.68
snR57	snR57	RRN10	P38204	145 aa		4.57	□□□□□ -1.68
snR57	snR57	OST1	P41543	476 aa	Known RBP	4.57	□□□□□ -1.68
snR57	snR57	PHO86	P46956	311 aa		4.57	□□□□□ -1.68
snR57	snR57	SKI7	Q08491	747 aa	Predicted RBP	4.57	□□□□□ -1.68
snR57	snR57	VPS54	Q12071	889 aa		4.57	□□□□□ -1.68
snR57	snR57	TY1B-A	O13527	1196 aa	Known RBP	4.56	□□□□□ -1.68
snR57	snR57	TEF1	P02994	458 aa	Known RBP	4.56	□□□□□ -1.68
snR57	snR57	RIB5	P38145	238 aa		4.56	□□□□□ -1.68
snR57	snR57	YAL037W	P39728	267 aa		4.56	□□□□□ -1.68
snR57	snR57	TOM22	P49334	152 aa		4.56	□□□□□ -1.68
snR57	snR57	GOR1	P53839	350 aa		4.56	□□□□□ -1.68
snR57	snR57	RRN11	Q04712	507 aa		4.56	□□□□□ -1.68
snR57	snR57	TLG2	Q08144	397 aa		4.56	□□□□□ -1.68
snR57	snR57	BUG1	Q12191	341 aa		4.56	□□□□□ -1.68
snR57	snR57	RMD5	Q12508	421 aa		4.56	□□□□□ -1.68
snR57	snR57	ILV5	P06168	395 aa	Known RBP	4.55	□□□□□ -1.68
snR57	snR57	SPO7	P18410	259 aa		4.55	□□□□□ -1.68
snR57	snR57	OCA2	P53949	197 aa		4.55	□□□□□ -1.68
snR57	snR57	GPI15	P53961	229 aa		4.55	□□□□□ -1.68
snR57	snR57	CIK1	Q01649	594 aa		4.55	□□□□□ -1.68
snR57	snR57	GIP3	Q03016	1276 aa		4.55	□□□□□ -1.68
snR57	snR57	YMR181C	Q03231	154 aa		4.55	□□□□□ -1.68
snR57	snR57	RSN1	Q03516	953 aa		4.55	□□□□□ -1.68
snR57	snR57	BET5	Q03630	159 aa		4.55	□□□□□ -1.68
snR57	snR57	SCW10	Q04951	389 aa		4.55	□□□□□ -1.68
snR57	snR57	ESA1	Q08649	445 aa		4.55	□□□□□ -1.68
snR57	snR57	YLR108C	Q12259	485 aa		4.55	□□□□□ -1.68
snR57	snR57	MTR10	Q99189	972 aa		4.55	□□□□□ -1.68
snR57	snR57	NIP1	P32497	812 aa	Known RBP	4.54	□□□□□ -1.68
snR57	snR57	AVT5	P38176	459 aa		4.54	□□□□□ -1.68
snR57	snR57	FAA2	P39518	744 aa		4.54	□□□□□ -1.68
snR57	snR57	SER3	P40054	469 aa		4.54	□□□□□ -1.68
snR57	snR57	YIL067C	P40514	678 aa		4.54	□□□□□ -1.68
snR57	snR57	YGR111W	P53265	400 aa		4.54	□□□□□ -1.68
snR57	snR57	HOM3	P10869	527 aa		4.53	□□□□□ -1.68
snR57	snR57	RRP4	P38792	359 aa	Known RBP	4.53	□□□□□ -1.68
snR57	snR57	VHS2	P40463	436 aa		4.53	□□□□□ -1.68
snR57	snR57	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
snR57	snR57	YPI1	P43587	155 aa		4.53	□□□□□ -1.68
snR57	snR57	RSC1	P53236	928 aa		4.53	□□□□□ -1.68
snR57	snR57	AEP3	Q12089	606 aa		4.53	□□□□□ -1.68
snR57	snR57	ADE4	P04046	510 aa	Known RBP	4.52	□□□□□ -1.69
snR57	snR57	SPT15	P13393	240 aa	Known RBP	4.52	□□□□□ -1.69
snR57	snR57	CPR4	P25334	318 aa		4.52	□□□□□ -1.69
snR57	snR57	KKQ8	P36004	724 aa		4.52	□□□□□ -1.69
snR57	snR57	PCF11	P39081	626 aa	Predicted RBP	4.52	□□□□□ -1.69
snR57	snR57	HXT11	P54862	567 aa		4.52	□□□□□ -1.69
snR57	snR57	HEL2	Q05580	639 aa	Known RBP	4.52	□□□□□ -1.69
snR57	snR57	PBA1	Q05778	276 aa		4.52	□□□□□ -1.69
snR57	snR57	ERV2	Q12284	196 aa		4.52	□□□□□ -1.69
snR57	snR57	COX3	P00420	269 aa		4.51	□□□□□ -1.69
snR57	snR57	HHF1	P02309	103 aa	Known RBP	4.51	□□□□□ -1.69
snR57	snR57	ARO3	P14843	370 aa	Known RBP	4.51	□□□□□ -1.69
snR57	snR57	SLY1	P22213	666 aa		4.51	□□□□□ -1.69
snR57	snR57	SDH3	P33421	198 aa		4.51	□□□□□ -1.69
snR57	snR57	LTV1	P34078	463 aa		4.51	□□□□□ -1.69
snR57	snR57	YBL059W	P34224	193 aa		4.51	□□□□□ -1.69
snR57	snR57	SWH1	P35845	1188 aa		4.51	□□□□□ -1.69
snR57	snR57	YBR139W	P38109	508 aa		4.51	□□□□□ -1.69
snR57	snR57	MTC6	P38849	526 aa		4.51	□□□□□ -1.69
snR57	snR57	WWM1	P43582	211 aa	Known RBP	4.51	□□□□□ -1.69
snR57	snR57	PHB2	P50085	310 aa		4.51	□□□□□ -1.69
snR57	snR57	PPM1	Q04081	328 aa		4.51	□□□□□ -1.69
snR57	snR57	UAF30	Q08747	228 aa		4.51	□□□□□ -1.69
snR57	snR57	ATG34	Q12292	412 aa		4.51	□□□□□ -1.69
snR57	snR57	GPM3	Q12326	303 aa		4.51	□□□□□ -1.69
snR57	snR57	SPO12	P17123	173 aa		4.5	□□□□□ -1.69
snR57	snR57	ASC1	P38011	319 aa	Known RBP	4.5	□□□□□ -1.69
snR57	snR57	ZTA1	P38230	334 aa	Known RBP	4.5	□□□□□ -1.69
snR57	snR57	YBR137W	P38276	179 aa		4.5	□□□□□ -1.69
snR57	snR57	VPS9	P54787	451 aa		4.5	□□□□□ -1.69
snR57	snR57	RPN9	Q04062	393 aa	Known RBP	4.5	□□□□□ -1.69
snR57	snR57	URH1	Q04179	340 aa		4.5	□□□□□ -1.69
snR57	snR57	SNX3	Q08826	162 aa	Known RBP	4.5	□□□□□ -1.69
snR57	snR57	YOR387C	Q08910	206 aa		4.5	□□□□□ -1.69
snR57	snR57	DEG1	P31115	442 aa	Known RBP	4.49	□□□□□ -1.69
snR57	snR57	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.49	□□□□□ -1.69	not detected
snR57	snR57	PEX5	P35056	612 aa		4.49	□□□□□ -1.69
snR57	snR57	RFS1	P38234	210 aa	Known RBP	4.49	□□□□□ -1.69
snR57	snR57	LRP1	P38801	184 aa	Known RBP	4.49	□□□□□ -1.69
snR57	snR57	NDT80	P38830	627 aa		4.49	□□□□□ -1.69
snR57	snR57	YPS6	P40583	537 aa		4.49	□□□□□ -1.69
snR57	snR57	NCA3	P46955	337 aa		4.49	□□□□□ -1.69
snR57	snR57	YGL242C	P53066	181 aa		4.49	□□□□□ -1.69
snR57	snR57	TOF1	P53840	1238 aa		4.49	□□□□□ -1.69
snR57	snR57	ELP3	Q02908	557 aa	Known RBP	4.49	□□□□□ -1.69
snR57	snR57	TSR1	Q07381	788 aa	Known RBP	4.49	□□□□□ -1.69
snR57	snR57	DCI1	Q08558	271 aa		4.49	□□□□□ -1.69
snR57	snR57	SRL2	Q12020	392 aa		4.49	□□□□□ -1.69
snR57	snR57	RAD57	P25301	460 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms