RNA–Protein interactions for RNA: YPR189W

SKI3, Transcript of Ski complex component and TPR protein, yeast

Gene SKI3, Length 4,299 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI3	YPR189W	LEA1	Q08963	238 aa	Predicted RBP	1.57	□□□□□ -2.16
SKI3	YPR189W	ULA1	Q12059	462 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	Q0010	Q9ZZX9	128 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	PET111	P08468	800 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	GCD2	P12754	651 aa	Predicted RBP	1.57	□□□□□ -2.16
SKI3	YPR189W	UNG1	P12887	359 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	SPS22	P25380	463 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	ICL1	P28240	557 aa	Predicted RBP	1.57	□□□□□ -2.16
SKI3	YPR189W	HMX1	P32339	317 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	NDI1	P32340	513 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	MRP4	P32902	394 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	NUP133	P36161	1157 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	RFS1	P38234	210 aa	Known RBP	1.57	□□□□□ -2.16
SKI3	YPR189W	RIX1	P38883	763 aa	Predicted RBP	1.57	□□□□□ -2.16
SKI3	YPR189W	YER130C	P39959	443 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	EMC2	P47133	292 aa	Known RBP	1.57	□□□□□ -2.16
SKI3	YPR189W	ROG1	P53118	685 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	YGL114W	P53134	725 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	LSC1	P53598	329 aa	Known RBP	1.57	□□□□□ -2.16
SKI3	YPR189W	CPR8	P53728	308 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	COQ9	Q05779	260 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	STE23	Q06010	1027 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	APC2	Q12440	853 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	ADE6	P38972	1358 aa	Known RBP	1.57	□□□□□ -2.16
SKI3	YPR189W	TDH1	P00360	332 aa	Known RBP	1.57	□□□□□ -2.16
SKI3	YPR189W	CDC21	P06785	304 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	PUT2	P07275	575 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	SAG1	P20840	650 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	HIR2	P32480	875 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	YKT6	P36015	200 aa	Known RBP	1.57	□□□□□ -2.16
SKI3	YPR189W	TPO5	P36029	618 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	ASC1	P38011	319 aa	Known RBP	1.57	□□□□□ -2.16
SKI3	YPR189W	YMR124W	P39523	943 aa	Known RBP	1.57	□□□□□ -2.16
SKI3	YPR189W	VHS2	P40463	436 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	IAH1	P41734	238 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	YGL242C	P53066	181 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	PNC1	P53184	216 aa	Known RBP	1.57	□□□□□ -2.16
SKI3	YPR189W	COP1	P53622	1201 aa	Known RBP	1.57	□□□□□ -2.16
SKI3	YPR189W	MSC1	Q03104	513 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	YMR310C	Q04867	317 aa	Predicted RBP	1.57	□□□□□ -2.16
SKI3	YPR189W	ATG38	Q05789	226 aa	Known RBP	1.57	□□□□□ -2.16
SKI3	YPR189W	PCL8	Q08966	492 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	LAS17	Q12446	633 aa		1.57	□□□□□ -2.16
SKI3	YPR189W	CAR1	P00812	333 aa	Known RBP	1.56	□□□□□ -2.16
SKI3	YPR189W	PPR1	P07272	904 aa	Predicted RBP	1.56	□□□□□ -2.16
SKI3	YPR189W	CAR2	P07991	424 aa	Known RBP	1.56	□□□□□ -2.16
SKI3	YPR189W	POL30	P15873	258 aa	Known RBP	1.56	□□□□□ -2.16
SKI3	YPR189W	MER1	P16523	270 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	CDC43	P18898	376 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	RPB8	P20436	146 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	STE11	P23561	717 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	PTC6	P25646	442 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	EMP70	P32802	667 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	SNU114	P36048	1008 aa	Known RBP	1.56	□□□□□ -2.16
SKI3	YPR189W	OLA1	P38219	394 aa	Known RBP	1.56	□□□□□ -2.16
SKI3	YPR189W	SNL1	P40548	159 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	CIN1	P40987	1014 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	GCD14	P46959	383 aa	Predicted RBP	1.56	□□□□□ -2.16
SKI3	YPR189W	ASN2	P49090	572 aa	Known RBP	1.56	□□□□□ -2.16
SKI3	YPR189W	MPS2	P53159	387 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	SMM1	P53720	384 aa	Known RBP	1.56	□□□□□ -2.16
SKI3	YPR189W	KTR5	P53966	522 aa	Predicted RBP	1.56	□□□□□ -2.16
SKI3	YPR189W	NDL1	Q06568	189 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	PEX27	Q08580	376 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	ADF1	Q2V2Q1	113 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	KIN3	P22209	435 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	DOA4	P32571	926 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	YKL070W	P36087	169 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	ATP3	P38077	311 aa	Known RBP	1.56	□□□□□ -2.16
SKI3	YPR189W	TSC10	P38342	320 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	SEC9	P40357	651 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	AIM20	P40451	204 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	NMD5	P46970	1048 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	YGL108C	P53139	140 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	YNL050C	P53952	270 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	GIP3	Q03016	1276 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	YDR541C	Q03049	344 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	INP2	Q03824	705 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	YLR297W	Q05899	129 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	ADE13	Q05911	482 aa	Known RBP	1.56	□□□□□ -2.16
SKI3	YPR189W	CLP1	Q08685	445 aa	Predicted RBP	1.56	□□□□□ -2.16
SKI3	YPR189W	YOR012W	Q12351	137 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	MLP1	Q02455	1875 aa	Known RBP	1.56	□□□□□ -2.16
SKI3	YPR189W	COX3	P00420	269 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	CDC37	P06101	506 aa	Known RBP	1.56	□□□□□ -2.16
SKI3	YPR189W	LEU4	P06208	619 aa	Known RBP	1.56	□□□□□ -2.16
SKI3	YPR189W	SGV1	P23293	657 aa	Known RBP	1.56	□□□□□ -2.16
SKI3	YPR189W	PMI40	P29952	429 aa	Known RBP	1.56	□□□□□ -2.16
SKI3	YPR189W	DPH5	P32469	300 aa	Predicted RBP	1.56	□□□□□ -2.16
SKI3	YPR189W	PTK1	P36002	662 aa	Predicted RBP	1.56	□□□□□ -2.16
SKI3	YPR189W	MRPL37	P36532	105 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	YMR262W	P38430	313 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	ERG7	P38604	731 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	TOM71	P38825	639 aa	Known RBP	1.56	□□□□□ -2.16
SKI3	YPR189W	YER034W	P40022	185 aa	Known RBP	1.56	□□□□□ -2.16
SKI3	YPR189W	YFL015C	P43578	164 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	ATG27	P46989	271 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	YGL185C	P53100	379 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	SHR3	Q02774	210 aa		1.56	□□□□□ -2.16
SKI3	YPR189W	YMR178W	Q03219	274 aa	Known RBP	1.56	□□□□□ -2.16

Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms