RNA–Protein interactions for RNA: YPR124W

CTR1, Transcript of High-affinity copper transporter of the plasma membrane, yeast

Gene CTR1, Length 1,221 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR1	YPR124W	VTC2	P43585	828 aa		4.82	□□□□□ -1.64
CTR1	YPR124W	SRB7	P47822	140 aa		4.82	□□□□□ -1.64
CTR1	YPR124W	AVT4	P50944	713 aa		4.82	□□□□□ -1.64
CTR1	YPR124W	RMD9	P53140	646 aa	Known RBP	4.82	□□□□□ -1.64
CTR1	YPR124W	ART5	P53244	586 aa	Known RBP	4.82	□□□□□ -1.64
CTR1	YPR124W	NCS2	P53923	493 aa	Predicted RBP	4.82	□□□□□ -1.64
CTR1	YPR124W	RPA49	Q01080	415 aa	Predicted RBP	4.82	□□□□□ -1.64
CTR1	YPR124W	PIR3	Q03180	325 aa		4.82	□□□□□ -1.64
CTR1	YPR124W	GIR2	Q03768	265 aa	Predicted RBP	4.82	□□□□□ -1.64
CTR1	YPR124W	INH1	P01097	85 aa		4.81	□□□□□ -1.64
CTR1	YPR124W	REC114	P32841	428 aa		4.81	□□□□□ -1.64
CTR1	YPR124W	NIP100	P33420	868 aa		4.81	□□□□□ -1.64
CTR1	YPR124W	MKT1	P40850	830 aa	Known RBP	4.81	□□□□□ -1.64
CTR1	YPR124W	YPI1	P43587	155 aa		4.81	□□□□□ -1.64
CTR1	YPR124W	TRS85	P46944	698 aa		4.81	□□□□□ -1.64
CTR1	YPR124W	VTA1	Q06263	330 aa		4.81	□□□□□ -1.64
CTR1	YPR124W	SCM3	Q12334	223 aa		4.81	□□□□□ -1.64
CTR1	YPR124W	PMD1	P32634	1753 aa		4.81	□□□□□ -1.64
CTR1	YPR124W	GPH1	P06738	902 aa	Known RBP	4.8	□□□□□ -1.64
CTR1	YPR124W	CPR1	P14832	162 aa	Known RBP	4.8	□□□□□ -1.64
CTR1	YPR124W	YIM1	P28625	365 aa		4.8	□□□□□ -1.64
CTR1	YPR124W	GLC7	P32598	312 aa	Known RBP	4.8	□□□□□ -1.64
CTR1	YPR124W	CCT2	P39076	527 aa	Known RBP	4.8	□□□□□ -1.64
CTR1	YPR124W	ISC1	P40015	477 aa	Known RBP	4.8	□□□□□ -1.64
CTR1	YPR124W	POP6	P53218	158 aa		4.8	□□□□□ -1.64
CTR1	YPR124W	ODC1	Q03028	310 aa		4.8	□□□□□ -1.64
CTR1	YPR124W	RSA1	Q08932	381 aa		4.8	□□□□□ -1.64
CTR1	YPR124W	YOL159C-A	Q3E769	90 aa		4.8	□□□□□ -1.64
CTR1	YPR124W	YER078W-A	Q3E7A2	54 aa		4.8	□□□□□ -1.64
CTR1	YPR124W	YLR278C	Q05854	1341 aa		4.79	□□□□□ -1.64
CTR1	YPR124W	YCR100C	P25606	316 aa		4.79	□□□□□ -1.64
CTR1	YPR124W	IDH2	P28241	369 aa	Known RBP	4.79	□□□□□ -1.64
CTR1	YPR124W	NFU1	P32860	256 aa		4.79	□□□□□ -1.64
CTR1	YPR124W	DLD2	P46681	530 aa	Known RBP	4.79	□□□□□ -1.64
CTR1	YPR124W	PNG1	Q02890	363 aa		4.79	□□□□□ -1.64
CTR1	YPR124W	YLR287C	Q05881	355 aa		4.79	□□□□□ -1.64
CTR1	YPR124W	UTP10	P42945	1769 aa	Known RBP	4.78	□□□□□ -1.64
CTR1	YPR124W	RIP1	P08067	215 aa		4.78	□□□□□ -1.64
CTR1	YPR124W	YAR066W	P0CX18	203 aa		4.78	□□□□□ -1.64
CTR1	YPR124W	YHR214W	P0CX19	203 aa		4.78	□□□□□ -1.64
CTR1	YPR124W	RPL3	P14126	387 aa	Known RBP	4.78	□□□□□ -1.64
CTR1	YPR124W	PPH22	P23595	377 aa		4.78	□□□□□ -1.64
CTR1	YPR124W	CLB3	P24870	427 aa		4.78	□□□□□ -1.64
CTR1	YPR124W	YOX1	P34161	385 aa		4.78	□□□□□ -1.64
CTR1	YPR124W	MNP1	P53163	194 aa	Predicted RBP	4.78	□□□□□ -1.64
CTR1	YPR124W	MRP51	Q02950	344 aa		4.78	□□□□□ -1.64
CTR1	YPR124W	BUG1	Q12191	341 aa		4.78	□□□□□ -1.64
CTR1	YPR124W	SFI1	Q12369	946 aa		4.78	□□□□□ -1.64
CTR1	YPR124W	CHS1	P08004	1131 aa		4.77	□□□□□ -1.65
CTR1	YPR124W	HEM15	P16622	393 aa		4.77	□□□□□ -1.65
CTR1	YPR124W	CLC1	P17891	233 aa		4.77	□□□□□ -1.65
CTR1	YPR124W	PRP21	P32524	280 aa	Predicted RBP	4.77	□□□□□ -1.65
CTR1	YPR124W	MRP4	P32902	394 aa		4.77	□□□□□ -1.65
CTR1	YPR124W	YCR041W	P37265	110 aa		4.77	□□□□□ -1.65
CTR1	YPR124W	YBR139W	P38109	508 aa		4.77	□□□□□ -1.65
CTR1	YPR124W	SPG5	P42933	373 aa		4.77	□□□□□ -1.65
CTR1	YPR124W	SYF1	Q04048	859 aa	Predicted RBP	4.77	□□□□□ -1.65
CTR1	YPR124W	MHP1	P43638	1398 aa		4.77	□□□□□ -1.65
CTR1	YPR124W	SNT1	P25357	1226 aa		4.76	□□□□□ -1.65
CTR1	YPR124W	ECM25	P32525	599 aa		4.76	□□□□□ -1.65
CTR1	YPR124W	SAS3	P34218	831 aa		4.76	□□□□□ -1.65
CTR1	YPR124W	JNM1	P36224	373 aa		4.76	□□□□□ -1.65
CTR1	YPR124W	IBD2	P53892	351 aa		4.76	□□□□□ -1.65
CTR1	YPR124W	HSP31	Q04432	237 aa		4.76	□□□□□ -1.65
CTR1	YPR124W	THP3	Q12049	470 aa	Known RBP	4.76	□□□□□ -1.65
CTR1	YPR124W	FAS2	P19097	1887 aa	Known RBP	4.75	□□□□□ -1.65
CTR1	YPR124W	SEC63	P14906	663 aa		4.75	□□□□□ -1.65
CTR1	YPR124W	HCS1	P34243	683 aa		4.75	□□□□□ -1.65
CTR1	YPR124W	FMS1	P50264	508 aa		4.75	□□□□□ -1.65
CTR1	YPR124W	YIP1	P53039	248 aa		4.75	□□□□□ -1.65
CTR1	YPR124W	YGL242C	P53066	181 aa		4.75	□□□□□ -1.65
CTR1	YPR124W	PCP1	P53259	346 aa		4.75	□□□□□ -1.65
CTR1	YPR124W	DSL1	P53847	754 aa		4.75	□□□□□ -1.65
CTR1	YPR124W	SIL1	Q08199	421 aa		4.75	□□□□□ -1.65
CTR1	YPR124W	ERV2	Q12284	196 aa		4.75	□□□□□ -1.65
CTR1	YPR124W	RRP12	Q12754	1228 aa	Known RBP	4.75	□□□□□ -1.65
CTR1	YPR124W	SPT7	P35177	1332 aa		4.74	□□□□□ -1.65
CTR1	YPR124W	HSP104	P31539	908 aa	Known RBP	4.74	□□□□□ -1.65
CTR1	YPR124W	RML2	P32611	393 aa		4.74	□□□□□ -1.65
CTR1	YPR124W	RFS1	P38234	210 aa	Known RBP	4.74	□□□□□ -1.65
CTR1	YPR124W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
CTR1	YPR124W	SSN8	P47821	323 aa		4.74	□□□□□ -1.65
CTR1	YPR124W	YPL199C	Q08954	240 aa		4.74	□□□□□ -1.65
CTR1	YPR124W	HIS4	P00815	799 aa	Known RBP	4.73	□□□□□ -1.65
CTR1	YPR124W	SPT15	P13393	240 aa	Known RBP	4.73	□□□□□ -1.65
CTR1	YPR124W	SMY1	P32364	656 aa	Known RBP	4.73	□□□□□ -1.65
CTR1	YPR124W	NAT2	P37293	288 aa		4.73	□□□□□ -1.65
CTR1	YPR124W	MIX23	P38162	196 aa		4.73	□□□□□ -1.65
CTR1	YPR124W	VHC1	P38329	1120 aa		4.73	□□□□□ -1.65
CTR1	YPR124W	LSM5	P40089	93 aa	Known RBP	4.73	□□□□□ -1.65
CTR1	YPR124W	YIL067C	P40514	678 aa		4.73	□□□□□ -1.65
CTR1	YPR124W	GPD2	P41911	440 aa	Known RBP	4.73	□□□□□ -1.65
CTR1	YPR124W	RRN11	Q04712	507 aa		4.73	□□□□□ -1.65
CTR1	YPR124W	ESA1	Q08649	445 aa		4.73	□□□□□ -1.65
CTR1	YPR124W	SIN4	P32259	974 aa		4.72	□□□□□ -1.65
CTR1	YPR124W	APE2	P32454	952 aa	Known RBP	4.72	□□□□□ -1.65
CTR1	YPR124W	ARA1	P38115	344 aa		4.72	□□□□□ -1.65
CTR1	YPR124W	SDS24	P38314	527 aa		4.72	□□□□□ -1.65
CTR1	YPR124W	RFC3	P38629	340 aa		4.72	□□□□□ -1.65
CTR1	YPR124W	YFL067W	P43537	175 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms