RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	RTT102	P53330	157 aa		4.18	□□□□□ -1.74
CMR3	YPR013C	REX4	Q08237	289 aa		4.18	□□□□□ -1.74
CMR3	YPR013C	RKM5	Q12367	367 aa		4.18	□□□□□ -1.74
CMR3	YPR013C	RNR2	P09938	399 aa	Known RBP	4.17	□□□□□ -1.74
CMR3	YPR013C	EXO70	P19658	623 aa		4.17	□□□□□ -1.74
CMR3	YPR013C	ILV6	P25605	309 aa	Known RBP	4.17	□□□□□ -1.74
CMR3	YPR013C	YPK3	P38070	525 aa		4.17	□□□□□ -1.74
CMR3	YPR013C	ATP3	P38077	311 aa	Known RBP	4.17	□□□□□ -1.74
CMR3	YPR013C	RTT107	P38850	1070 aa		4.17	□□□□□ -1.74
CMR3	YPR013C	YAL037W	P39728	267 aa		4.17	□□□□□ -1.74
CMR3	YPR013C	CSM2	P40465	213 aa		4.17	□□□□□ -1.74
CMR3	YPR013C	QRI1	P43123	477 aa	Known RBP	4.17	□□□□□ -1.74
CMR3	YPR013C	SNO3	P43544	222 aa		4.17	□□□□□ -1.74
CMR3	YPR013C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
CMR3	YPR013C	AIP1	P46680	615 aa	Known RBP	4.17	□□□□□ -1.74
CMR3	YPR013C	YPT11	P48559	417 aa		4.17	□□□□□ -1.74
CMR3	YPR013C	PCP1	P53259	346 aa		4.17	□□□□□ -1.74
CMR3	YPR013C	URH1	Q04179	340 aa		4.17	□□□□□ -1.74
CMR3	YPR013C	ECI1	Q05871	280 aa		4.17	□□□□□ -1.74
CMR3	YPR013C	YLH47	Q06493	454 aa		4.17	□□□□□ -1.74
CMR3	YPR013C	YLR413W	Q06689	675 aa		4.17	□□□□□ -1.74
CMR3	YPR013C	AAD15	Q08361	143 aa		4.17	□□□□□ -1.74
CMR3	YPR013C	NRT1	Q08485	598 aa		4.17	□□□□□ -1.74
CMR3	YPR013C	PEX27	Q08580	376 aa		4.17	□□□□□ -1.74
CMR3	YPR013C	LSP1	Q12230	341 aa	Known RBP	4.17	□□□□□ -1.74
CMR3	YPR013C	FRE7	Q12333	620 aa		4.17	□□□□□ -1.74
CMR3	YPR013C	DST1	P07273	309 aa		4.16	□□□□□ -1.74
CMR3	YPR013C	RGT1	P32862	1170 aa		4.16	□□□□□ -1.74
CMR3	YPR013C	PDR3	P33200	976 aa		4.16	□□□□□ -1.74
CMR3	YPR013C	SPT10	P35208	640 aa		4.16	□□□□□ -1.74
CMR3	YPR013C	TIF5	P38431	405 aa	Known RBP	4.16	□□□□□ -1.74
CMR3	YPR013C	ERG7	P38604	731 aa		4.16	□□□□□ -1.74
CMR3	YPR013C	OSH3	P38713	996 aa	Known RBP	4.16	□□□□□ -1.74
CMR3	YPR013C	RTS2	P40962	232 aa		4.16	□□□□□ -1.74
CMR3	YPR013C	IAH1	P41734	238 aa		4.16	□□□□□ -1.74
CMR3	YPR013C	YNL181W	P53878	407 aa		4.16	□□□□□ -1.74
CMR3	YPR013C	SAM50	P53969	484 aa		4.16	□□□□□ -1.74
CMR3	YPR013C	RSC9	Q03124	581 aa		4.16	□□□□□ -1.74
CMR3	YPR013C	YMR310C	Q04867	317 aa	Predicted RBP	4.16	□□□□□ -1.74
CMR3	YPR013C	YLR297W	Q05899	129 aa		4.16	□□□□□ -1.74
CMR3	YPR013C	CUR1	Q06469	252 aa		4.16	□□□□□ -1.74
CMR3	YPR013C	ATG34	Q12292	412 aa		4.16	□□□□□ -1.74
CMR3	YPR013C	YOR012W	Q12351	137 aa		4.16	□□□□□ -1.74
CMR3	YPR013C	MAS1	P10507	462 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	GAL3	P13045	520 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	CTR86	P25355	563 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	HMX1	P32339	317 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	PPZ2	P33329	710 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	SPC34	P36131	295 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	YBR139W	P38109	508 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	STP2	P38704	541 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	YHR177W	P38867	453 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	ISC1	P40015	477 aa	Known RBP	4.15	□□□□□ -1.75
CMR3	YPR013C	CFD1	P40558	293 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	BNA3	P47039	444 aa	Known RBP	4.15	□□□□□ -1.75
CMR3	YPR013C	YHC3	P47040	408 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	HMS2	P47175	358 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	YGL114W	P53134	725 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	YGL082W	P53155	381 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	ALF1	P53904	254 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	GPI15	P53961	229 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	MMT1	Q03218	510 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	NUP53	Q03790	475 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	MSS11	Q03825	758 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	URC2	Q04411	772 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	SNT309	Q06091	175 aa	Predicted RBP	4.15	□□□□□ -1.75
CMR3	YPR013C	THI20	Q08224	551 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	OSW1	Q08692	278 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	RNH203	Q12338	110 aa		4.15	□□□□□ -1.75
CMR3	YPR013C	IMA3	P0CW40	589 aa		4.14	□□□□□ -1.75
CMR3	YPR013C	IMA4	P0CW41	589 aa		4.14	□□□□□ -1.75
CMR3	YPR013C	HNM1	P19807	563 aa		4.14	□□□□□ -1.75
CMR3	YPR013C	SLM5	P25345	492 aa	Known RBP	4.14	□□□□□ -1.75
CMR3	YPR013C	MGR1	P25573	417 aa		4.14	□□□□□ -1.75
CMR3	YPR013C	FRE1	P32791	686 aa		4.14	□□□□□ -1.75
CMR3	YPR013C	SCO2	P38072	301 aa		4.14	□□□□□ -1.75
CMR3	YPR013C	RIM2	P38127	377 aa		4.14	□□□□□ -1.75
CMR3	YPR013C	LYS1	P38998	373 aa	RIP-Chip data	4.14	□□□□□ -1.75	RIP-Chip
CMR3	YPR013C	END3	P39013	349 aa		4.14	□□□□□ -1.75
CMR3	YPR013C	AIM20	P40451	204 aa		4.14	□□□□□ -1.75
CMR3	YPR013C	SNL1	P40548	159 aa		4.14	□□□□□ -1.75
CMR3	YPR013C	SPG5	P42933	373 aa		4.14	□□□□□ -1.75
CMR3	YPR013C	YIP1	P53039	248 aa		4.14	□□□□□ -1.75
CMR3	YPR013C	CWC22	P53333	577 aa	Known RBP	4.14	□□□□□ -1.75
CMR3	YPR013C	YNL146W	P53906	100 aa		4.14	□□□□□ -1.75
CMR3	YPR013C	STD1	Q02794	444 aa		4.14	□□□□□ -1.75
CMR3	YPR013C	PNG1	Q02890	363 aa		4.14	□□□□□ -1.75
CMR3	YPR013C	RRN5	Q02983	363 aa		4.14	□□□□□ -1.75
CMR3	YPR013C	BNA5	Q05979	453 aa		4.14	□□□□□ -1.75
CMR3	YPR013C	STE23	Q06010	1027 aa		4.14	□□□□□ -1.75
CMR3	YPR013C	ECM7	Q06200	448 aa		4.14	□□□□□ -1.75
CMR3	YPR013C	YPR078C	Q06813	372 aa		4.14	□□□□□ -1.75
CMR3	YPR013C	IMA2	Q08295	589 aa		4.14	□□□□□ -1.75
CMR3	YPR013C	MRPL23	Q12487	163 aa	Predicted RBP	4.14	□□□□□ -1.75
CMR3	YPR013C	RMD5	Q12508	421 aa		4.14	□□□□□ -1.75
CMR3	YPR013C	SUP35	P05453	685 aa	Known RBP	4.13	□□□□□ -1.75
CMR3	YPR013C	TUB1	P09733	447 aa	Known RBP	4.13	□□□□□ -1.75
CMR3	YPR013C	RPL12A	P0CX53	165 aa	Known RBP	4.13	□□□□□ -1.75
CMR3	YPR013C	RPL12B	P0CX54	165 aa		4.13	□□□□□ -1.75
CMR3	YPR013C	MBR1	P23493	339 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms