RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeastyeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDE1YPL110C APN2P38207 520 aa4.33□□□□□ -1.72
GDE1YPL110C EGD2P38879 174 aaKnown RBP4.33□□□□□ -1.72
GDE1YPL110C PLB1P39105 664 aa4.33□□□□□ -1.72
GDE1YPL110C FIG4P42837 879 aa4.33□□□□□ -1.72
GDE1YPL110C MRPS18P42847 217 aa4.33□□□□□ -1.72
GDE1YPL110C PRY3P47033 881 aa4.33□□□□□ -1.72
GDE1YPL110C PAC10P48363 199 aa4.33□□□□□ -1.72
GDE1YPL110C MRX6P48564 524 aa4.33□□□□□ -1.72
GDE1YPL110C MPP6P53725 186 aaPredicted RBP4.33□□□□□ -1.72
GDE1YPL110C YPL014WQ02606 381 aa4.33□□□□□ -1.72
GDE1YPL110C SMA2Q04658 369 aa4.33□□□□□ -1.72
GDE1YPL110C LDB18Q07887 179 aa4.33□□□□□ -1.72
GDE1YPL110C CBC2Q08920 208 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
GDE1YPL110C TGS1Q12052 315 aa4.33□□□□□ -1.72
GDE1YPL110C LPX1Q12405 387 aaKnown RBP4.33□□□□□ -1.72
GDE1YPL110C TRM11Q12463 433 aa4.33□□□□□ -1.72
GDE1YPL110C HAP2P06774 265 aa4.33□□□□□ -1.72
GDE1YPL110C IFM1P25038 676 aa4.33□□□□□ -1.72
GDE1YPL110C PRE4P30657 266 aa4.33□□□□□ -1.72
GDE1YPL110C ISC10P32645 267 aa4.33□□□□□ -1.72
GDE1YPL110C MNS1P32906 549 aa4.33□□□□□ -1.72
GDE1YPL110C PGM1P33401 570 aaKnown RBP4.33□□□□□ -1.72
GDE1YPL110C GLY1P37303 387 aaKnown RBP4.33□□□□□ -1.72
GDE1YPL110C RFC3P38629 340 aa4.33□□□□□ -1.72
GDE1YPL110C COS8P38723 381 aa4.33□□□□□ -1.72
GDE1YPL110C SEC72P39742 193 aaKnown RBP4.33□□□□□ -1.72
GDE1YPL110C RMD6P39975 231 aa4.33□□□□□ -1.72
GDE1YPL110C MSS2P40990 351 aa4.33□□□□□ -1.72
GDE1YPL110C GNA1P43577 159 aaPredicted RBP4.33□□□□□ -1.72
GDE1YPL110C PMT4P46971 762 aa4.33□□□□□ -1.72
GDE1YPL110C PYK2P52489 506 aaKnown RBP4.33□□□□□ -1.72
GDE1YPL110C YGL159WP53110 370 aa4.33□□□□□ -1.72
GDE1YPL110C YGR017WP53210 297 aa4.33□□□□□ -1.72
GDE1YPL110C AAT1Q01802 451 aa4.33□□□□□ -1.72
GDE1YPL110C ZRT2Q12436 422 aa4.33□□□□□ -1.72
GDE1YPL110C PSF1Q12488 208 aa4.33□□□□□ -1.72
GDE1YPL110C RPN13O13563 156 aa4.33□□□□□ -1.72
GDE1YPL110C SPS4P09937 338 aa4.33□□□□□ -1.72
GDE1YPL110C IMA3P0CW40 589 aa4.33□□□□□ -1.72
GDE1YPL110C IMA4P0CW41 589 aa4.33□□□□□ -1.72
GDE1YPL110C RPL3P14126 387 aaKnown RBP4.33□□□□□ -1.72
GDE1YPL110C MRPL44P19956 98 aa4.33□□□□□ -1.72
GDE1YPL110C PRE8P23639 250 aa4.33□□□□□ -1.72
GDE1YPL110C HBS1P32769 611 aaKnown RBP4.33□□□□□ -1.72
GDE1YPL110C RRN10P38204 145 aa4.33□□□□□ -1.72
GDE1YPL110C ICS2P38284 255 aa4.33□□□□□ -1.72
GDE1YPL110C ALR2P43553 858 aa4.33□□□□□ -1.72
GDE1YPL110C CAF16P43569 289 aa4.33□□□□□ -1.72
GDE1YPL110C SAD1P43589 448 aa4.33□□□□□ -1.72
GDE1YPL110C YJR030CP47101 745 aa4.33□□□□□ -1.72
GDE1YPL110C ADO1P47143 340 aaKnown RBP4.33□□□□□ -1.72
GDE1YPL110C YGR026WP53217 278 aa4.33□□□□□ -1.72
GDE1YPL110C PFA5Q03289 374 aa4.33□□□□□ -1.72
GDE1YPL110C IMA2Q08295 589 aa4.33□□□□□ -1.72
GDE1YPL110C SYC1Q08553 188 aaPredicted RBP4.33□□□□□ -1.72
GDE1YPL110C OXR1Q08952 273 aa4.33□□□□□ -1.72
GDE1YPL110C ATP1P07251 545 aaKnown RBP4.32□□□□□ -1.72
GDE1YPL110C COS2P0CX12 379 aa4.32□□□□□ -1.72
GDE1YPL110C COS3P0CX13 379 aa4.32□□□□□ -1.72
GDE1YPL110C HEM13P11353 328 aaKnown RBP4.32□□□□□ -1.72
GDE1YPL110C IMG2P25642 146 aaPredicted RBP4.32□□□□□ -1.72
GDE1YPL110C CMK1P27466 446 aaKnown RBP4.32□□□□□ -1.72
GDE1YPL110C URA7P28274 579 aaKnown RBP4.32□□□□□ -1.72
GDE1YPL110C MCM5P29496 775 aaKnown RBP4.32□□□□□ -1.72
GDE1YPL110C IRE1P32361 1115 aa4.32□□□□□ -1.72
GDE1YPL110C HES1P35843 434 aa4.32□□□□□ -1.72
GDE1YPL110C KKQ8P36004 724 aa4.32□□□□□ -1.72
GDE1YPL110C TVP38P36164 337 aa4.32□□□□□ -1.72
GDE1YPL110C MRPL15P36523 253 aa4.32□□□□□ -1.72
GDE1YPL110C SLD3P53135 668 aa4.32□□□□□ -1.72
GDE1YPL110C SNU56Q03782 492 aaKnown RBP4.32□□□□□ -1.72
GDE1YPL110C YDR124WQ04608 324 aa4.32□□□□□ -1.72
GDE1YPL110C YMR253CQ04835 414 aa4.32□□□□□ -1.72
GDE1YPL110C YLR036CQ07986 203 aa4.32□□□□□ -1.72
GDE1YPL110C LEA1Q08963 238 aaPredicted RBP4.32□□□□□ -1.72
GDE1YPL110C GRE2Q12068 342 aaKnown RBP4.32□□□□□ -1.72
GDE1YPL110C SUL2Q12325 893 aa4.32□□□□□ -1.72
GDE1YPL110C ISN1Q99312 450 aa4.32□□□□□ -1.72
GDE1YPL110C RNA14P25298 677 aaKnown RBP4.32□□□□□ -1.72
GDE1YPL110C PTC6P25646 442 aa4.32□□□□□ -1.72
GDE1YPL110C RPC25P35718 212 aa4.32□□□□□ -1.72
GDE1YPL110C CST26P38226 397 aa4.32□□□□□ -1.72
GDE1YPL110C NTC20P38302 140 aaPredicted RBP4.32□□□□□ -1.72
GDE1YPL110C YNG2P38806 282 aaKnown RBP4.32□□□□□ -1.72
GDE1YPL110C ATG7P38862 630 aa4.32□□□□□ -1.72
GDE1YPL110C LSM4P40070 187 aaKnown RBP4.32□□□□□ -1.72
GDE1YPL110C YJR096WP47137 282 aa4.32□□□□□ -1.72
GDE1YPL110C ARH1P48360 493 aa4.32□□□□□ -1.72
GDE1YPL110C BUD17P53727 317 aa4.32□□□□□ -1.72
GDE1YPL110C NUP116Q02630 1113 aa4.32□□□□□ -1.72
GDE1YPL110C MSC2Q03455 724 aa4.32□□□□□ -1.72
GDE1YPL110C DAL4Q04895 635 aa4.32□□□□□ -1.72
GDE1YPL110C ZEO1Q08245 113 aa4.32□□□□□ -1.72
GDE1YPL110C VAM3Q12241 283 aa4.32□□□□□ -1.72
GDE1YPL110C EFG1Q3E705 233 aaKnown RBP4.32□□□□□ -1.72
GDE1YPL110C AI5_BETAQ9ZZX0 354 aa4.32□□□□□ -1.72
GDE1YPL110C STE2D6VTK4 431 aa4.32□□□□□ -1.72
GDE1YPL110C PDX1P16451 410 aa4.32□□□□□ -1.72
GDE1YPL110C SRV2P17555 526 aaKnown RBP4.32□□□□□ -1.72
GDE1YPL110C MET16P18408 261 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms