RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C REC102Q02721 264 aa7.55□□□□□ -1.2
LSP1YPL004C PEX25Q02969 394 aa7.55□□□□□ -1.2
LSP1YPL004C RQC1Q05468 723 aaKnown RBP7.55□□□□□ -1.2
LSP1YPL004C YOL131WQ08270 108 aa7.55□□□□□ -1.2
LSP1YPL004C DIA2Q08496 732 aaPredicted RBP7.55□□□□□ -1.2
LSP1YPL004C GLT1Q12680 2145 aaKnown RBP7.54□□□□□ -1.2
LSP1YPL004C ATP4P05626 244 aa7.54□□□□□ -1.2
LSP1YPL004C PRP4P20053 465 aaKnown RBP7.54□□□□□ -1.2
LSP1YPL004C MXR2P25566 168 aa7.54□□□□□ -1.2
LSP1YPL004C FAA1P30624 700 aaKnown RBP7.54□□□□□ -1.2
LSP1YPL004C LST4P34239 828 aa7.54□□□□□ -1.2
LSP1YPL004C GLG1P36143 616 aa7.54□□□□□ -1.2
LSP1YPL004C MRPL17P36528 281 aa7.54□□□□□ -1.2
LSP1YPL004C RLP7P40693 322 aaKnown RBP7.54□□□□□ -1.2
LSP1YPL004C IMA5P40884 581 aa7.54□□□□□ -1.2
LSP1YPL004C JHD2P47156 728 aaPredicted RBP7.54□□□□□ -1.2
LSP1YPL004C ATF2P53296 535 aa7.54□□□□□ -1.2
LSP1YPL004C SNP1Q00916 300 aaPredicted RBP7.54□□□□□ -1.2
LSP1YPL004C MSC1Q03104 513 aa7.54□□□□□ -1.2
LSP1YPL004C MMT1Q03218 510 aa7.54□□□□□ -1.2
LSP1YPL004C YIG1Q08956 461 aa7.54□□□□□ -1.2
LSP1YPL004C YPR202WQ08993 238 aa7.54□□□□□ -1.2
LSP1YPL004C NSL1Q12143 216 aa7.54□□□□□ -1.2
LSP1YPL004C TOP3P13099 656 aa7.53□□□□□ -1.2
LSP1YPL004C CDC26P14724 124 aa7.53□□□□□ -1.2
LSP1YPL004C DAP2P18962 818 aa7.53□□□□□ -1.2
LSP1YPL004C CCA1P21269 546 aa7.53□□□□□ -1.2
LSP1YPL004C ARE1P25628 610 aa7.53□□□□□ -1.2
LSP1YPL004C CSM1P25651 190 aa7.53□□□□□ -1.2
LSP1YPL004C YJU2P28320 278 aaPredicted RBP7.53□□□□□ -1.2
LSP1YPL004C SEC17P32602 292 aa7.53□□□□□ -1.2
LSP1YPL004C SCO2P38072 301 aa7.53□□□□□ -1.2
LSP1YPL004C ROT2P38138 954 aa7.53□□□□□ -1.2
LSP1YPL004C VNX1P42839 908 aa7.53□□□□□ -1.2
LSP1YPL004C MIG2P53035 382 aa7.53□□□□□ -1.2
LSP1YPL004C GAD1Q04792 585 aa7.53□□□□□ -1.2
LSP1YPL004C SSQ1Q05931 657 aaPredicted RBP7.53□□□□□ -1.2
LSP1YPL004C YEH1Q07804 573 aa7.53□□□□□ -1.2
LSP1YPL004C NBA1Q08229 501 aaKnown RBP7.53□□□□□ -1.2
LSP1YPL004C MCA1Q08601 432 aa7.53□□□□□ -1.2
LSP1YPL004C YVC1Q12324 675 aa7.53□□□□□ -1.2
LSP1YPL004C COX1P00401 534 aa7.52□□□□□ -1.21
LSP1YPL004C MSS116P15424 664 aaKnown RBP7.52□□□□□ -1.21
LSP1YPL004C RVS161P25343 265 aaKnown RBP7.52□□□□□ -1.21
LSP1YPL004C LDB16P25587 256 aa7.52□□□□□ -1.21
LSP1YPL004C ZIP1P31111 875 aa7.52□□□□□ -1.21
LSP1YPL004C DGR2P32330 852 aa7.52□□□□□ -1.21
LSP1YPL004C SSO1P32867 290 aa7.52□□□□□ -1.21
LSP1YPL004C RPT5P33297 434 aaKnown RBP7.52□□□□□ -1.21
LSP1YPL004C IST2P38250 946 aa7.52□□□□□ -1.21
LSP1YPL004C GDT1P38301 280 aaPredicted RBP7.52□□□□□ -1.21
LSP1YPL004C ICE2P40499 491 aa7.52□□□□□ -1.21
LSP1YPL004C STE24P47154 453 aa7.52□□□□□ -1.21
LSP1YPL004C LCL3P53153 274 aa7.52□□□□□ -1.21
LSP1YPL004C COG2P53271 262 aa7.52□□□□□ -1.21
LSP1YPL004C SPC24Q04477 213 aa7.52□□□□□ -1.21
LSP1YPL004C NSI1Q12457 570 aa7.52□□□□□ -1.21
LSP1YPL004C SNF8Q12483 233 aa7.52□□□□□ -1.21
LSP1YPL004C CBP2P03874 630 aaPredicted RBP7.51□□□□□ -1.21
LSP1YPL004C ARG81P05085 880 aa7.51□□□□□ -1.21
LSP1YPL004C TPK2P06245 380 aa7.51□□□□□ -1.21
LSP1YPL004C UNG1P12887 359 aa7.51□□□□□ -1.21
LSP1YPL004C APN1P22936 367 aa7.51□□□□□ -1.21
LSP1YPL004C YCL049CP25577 312 aa7.51□□□□□ -1.21
LSP1YPL004C PMT2P31382 759 aa7.51□□□□□ -1.21
LSP1YPL004C STP2P38704 541 aa7.51□□□□□ -1.21
LSP1YPL004C MBP1P39678 833 aa7.51□□□□□ -1.21
LSP1YPL004C RGI1P40043 161 aaPredicted RBP7.51□□□□□ -1.21
LSP1YPL004C PMT4P46971 762 aa7.51□□□□□ -1.21
LSP1YPL004C YJL043WP47053 257 aa7.51□□□□□ -1.21
LSP1YPL004C CSL4P53859 292 aaPredicted RBP7.51□□□□□ -1.21
LSP1YPL004C HSP31Q04432 237 aa7.51□□□□□ -1.21
LSP1YPL004C DYN3Q04949 312 aa7.51□□□□□ -1.21
LSP1YPL004C GGA1Q06336 557 aa7.51□□□□□ -1.21
LSP1YPL004C YLL007CQ07799 665 aa7.51□□□□□ -1.21
LSP1YPL004C PSR1Q07800 427 aa7.51□□□□□ -1.21
LSP1YPL004C SNX3Q08826 162 aaKnown RBP7.51□□□□□ -1.21
LSP1YPL004C YTM1Q12024 460 aaPredicted RBP7.51□□□□□ -1.21
LSP1YPL004C MLH3Q12083 715 aa7.51□□□□□ -1.21
LSP1YPL004C RPN6Q12377 434 aa7.51□□□□□ -1.21
LSP1YPL004C TY4B-PA0A0B7P3V8 1104 aa7.5□□□□□ -1.21
LSP1YPL004C RNA1P11745 407 aaKnown RBP7.5□□□□□ -1.21
LSP1YPL004C ORC2P32833 620 aa7.5□□□□□ -1.21
LSP1YPL004C AIM2P39721 246 aa7.5□□□□□ -1.21
LSP1YPL004C FMP52P40008 231 aa7.5□□□□□ -1.21
LSP1YPL004C TED1P40533 473 aa7.5□□□□□ -1.21
LSP1YPL004C TMA22P47089 198 aaPredicted RBP7.5□□□□□ -1.21
LSP1YPL004C RHO4Q00246 291 aa7.5□□□□□ -1.21
LSP1YPL004C OAZ1Q02803 292 aa7.5□□□□□ -1.21
LSP1YPL004C ELP4Q02884 456 aaKnown RBP7.5□□□□□ -1.21
LSP1YPL004C YMR010WQ03687 405 aa7.5□□□□□ -1.21
LSP1YPL004C YMR310CQ04867 317 aaPredicted RBP7.5□□□□□ -1.21
LSP1YPL004C GTB1Q04924 702 aa7.5□□□□□ -1.21
LSP1YPL004C GMC2Q06201 188 aa7.5□□□□□ -1.21
LSP1YPL004C YPL066WQ12194 479 aa7.5□□□□□ -1.21
LSP1YPL004C YPT1P01123 206 aaKnown RBP7.49□□□□□ -1.21
LSP1YPL004C ARG3P05150 338 aa7.49□□□□□ -1.21
LSP1YPL004C DCG1P32460 244 aa7.49□□□□□ -1.21
LSP1YPL004C NUP2P32499 720 aa7.49□□□□□ -1.21
LSP1YPL004C TRM5P38793 499 aa7.49□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms