RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C ARG4P04076 463 aaPredicted RBP3.83□□□□□ -1.8
RPN8YOR261C ILV5P06168 395 aaKnown RBP3.83□□□□□ -1.8
RPN8YOR261C FUR1P18562 216 aaKnown RBP3.83□□□□□ -1.8
RPN8YOR261C SLY1P22213 666 aa3.83□□□□□ -1.8
RPN8YOR261C LSB5P25369 354 aa3.83□□□□□ -1.8
RPN8YOR261C YCR051WP25631 222 aa3.83□□□□□ -1.8
RPN8YOR261C BEM1P29366 551 aa3.83□□□□□ -1.8
RPN8YOR261C BYE1P36106 594 aa3.83□□□□□ -1.8
RPN8YOR261C SWD3P38123 315 aa3.83□□□□□ -1.8
RPN8YOR261C PTH1P38876 190 aaKnown RBP3.83□□□□□ -1.8
RPN8YOR261C PRE5P40302 234 aaKnown RBP3.83□□□□□ -1.8
RPN8YOR261C MTM1P53320 366 aa3.83□□□□□ -1.8
RPN8YOR261C PPM1Q04081 328 aa3.83□□□□□ -1.8
RPN8YOR261C SGT1Q08446 395 aa3.83□□□□□ -1.8
RPN8YOR261C CLN3P13365 580 aa3.82□□□□□ -1.8
RPN8YOR261C ISY1P21374 235 aaPredicted RBP3.82□□□□□ -1.8
RPN8YOR261C NCA3P46955 337 aa3.82□□□□□ -1.8
RPN8YOR261C HMS2P47175 358 aa3.82□□□□□ -1.8
RPN8YOR261C SKO1Q02100 647 aa3.82□□□□□ -1.8
RPN8YOR261C ROY1Q04847 553 aa3.82□□□□□ -1.8
RPN8YOR261C SKI7Q08491 747 aaPredicted RBP3.82□□□□□ -1.8
RPN8YOR261C RRG7Q08774 242 aaPredicted RBP3.82□□□□□ -1.8
RPN8YOR261C YRF1-4O13559 1382 aa3.81□□□□□ -1.8
RPN8YOR261C ADH2P00331 348 aaKnown RBP3.81□□□□□ -1.8
RPN8YOR261C CDC60P26637 1090 aaKnown RBP3.81□□□□□ -1.8
RPN8YOR261C SOR1P35497 357 aaKnown RBP3.81□□□□□ -1.8
RPN8YOR261C MRPL4P36517 319 aa3.81□□□□□ -1.8
RPN8YOR261C MTC6P38849 526 aa3.81□□□□□ -1.8
RPN8YOR261C BNI5P53890 448 aaKnown RBP3.81□□□□□ -1.8
RPN8YOR261C KAP120Q02932 1032 aa3.81□□□□□ -1.8
RPN8YOR261C HER2Q03557 464 aa3.81□□□□□ -1.8
RPN8YOR261C YDR131CQ03899 556 aa3.81□□□□□ -1.8
RPN8YOR261C DON1Q05610 365 aa3.81□□□□□ -1.8
RPN8YOR261C SOR2Q07786 357 aa3.81□□□□□ -1.8
RPN8YOR261C HRT3Q12347 344 aa3.81□□□□□ -1.8
RPN8YOR261C RPS8AP0CX39 200 aaKnown RBP3.8□□□□□ -1.8
RPN8YOR261C RPS8BP0CX40 200 aaKnown RBP3.8□□□□□ -1.8
RPN8YOR261C REC107P21651 314 aa3.8□□□□□ -1.8
RPN8YOR261C ADK2P26364 225 aa3.8□□□□□ -1.8
RPN8YOR261C SMY1P32364 656 aaKnown RBP3.8□□□□□ -1.8
RPN8YOR261C NOC2P39744 710 aaKnown RBP3.8□□□□□ -1.8
RPN8YOR261C ADD37Q03233 198 aa3.8□□□□□ -1.8
RPN8YOR261C RSN1Q03516 953 aa3.8□□□□□ -1.8
RPN8YOR261C BET5Q03630 159 aa3.8□□□□□ -1.8
RPN8YOR261C PAL1Q05518 499 aaKnown RBP3.8□□□□□ -1.8
RPN8YOR261C HRI1Q05905 244 aaKnown RBP3.8□□□□□ -1.8
RPN8YOR261C REX4Q08237 289 aa3.8□□□□□ -1.8
RPN8YOR261C SNX3Q08826 162 aaKnown RBP3.8□□□□□ -1.8
RPN8YOR261C SCEIP03882 235 aa3.79□□□□□ -1.8
RPN8YOR261C KKQ8P36004 724 aa3.79□□□□□ -1.8
RPN8YOR261C APE3P37302 537 aaKnown RBP3.79□□□□□ -1.8
RPN8YOR261C YAL037WP39728 267 aa3.79□□□□□ -1.8
RPN8YOR261C PAN6P40459 309 aa3.79□□□□□ -1.8
RPN8YOR261C SSU1P41930 458 aa3.79□□□□□ -1.8
RPN8YOR261C TAF12Q03761 539 aa3.79□□□□□ -1.8
RPN8YOR261C NFT1P0CE68 1218 aa3.78□□□□□ -1.8
RPN8YOR261C SPO12P17123 173 aa3.78□□□□□ -1.8
RPN8YOR261C PET123P17558 318 aa3.78□□□□□ -1.8
RPN8YOR261C URA7P28274 579 aaKnown RBP3.78□□□□□ -1.8
RPN8YOR261C MNS1P32906 549 aa3.78□□□□□ -1.8
RPN8YOR261C MSG5P38590 489 aa3.78□□□□□ -1.8
RPN8YOR261C PHO86P46956 311 aa3.78□□□□□ -1.8
RPN8YOR261C SDT1P53078 280 aa3.78□□□□□ -1.8
RPN8YOR261C MDG1P53885 366 aa3.78□□□□□ -1.8
RPN8YOR261C GPI15P53961 229 aa3.78□□□□□ -1.8
RPN8YOR261C AFI1Q99222 893 aa3.78□□□□□ -1.8
RPN8YOR261C TRP1P00912 224 aa3.77□□□□□ -1.81
RPN8YOR261C CYC3P06182 269 aa3.77□□□□□ -1.81
RPN8YOR261C PDX1P16451 410 aa3.77□□□□□ -1.81
RPN8YOR261C SRV2P17555 526 aaKnown RBP3.77□□□□□ -1.81
RPN8YOR261C DAL2P25335 343 aa3.77□□□□□ -1.81
RPN8YOR261C MUD1P32605 298 aaKnown RBP3.77□□□□□ -1.81
RPN8YOR261C CWC25P53854 179 aaKnown RBP3.77□□□□□ -1.81
RPN8YOR261C SPC19Q03954 165 aa3.77□□□□□ -1.81
RPN8YOR261C MHR1Q06630 226 aa3.77□□□□□ -1.81
RPN8YOR261C TMC1Q08422 150 aaPredicted RBP3.77□□□□□ -1.81
RPN8YOR261C RAD57P25301 460 aa3.76□□□□□ -1.81
RPN8YOR261C RPC53P25441 422 aa3.76□□□□□ -1.81
RPN8YOR261C ERV1P27882 189 aa3.76□□□□□ -1.81
RPN8YOR261C NIP1P32497 812 aaKnown RBP3.76□□□□□ -1.81
RPN8YOR261C KAR9P32526 644 aa3.76□□□□□ -1.81
RPN8YOR261C PCF11P39081 626 aaPredicted RBP3.76□□□□□ -1.81
RPN8YOR261C AZR1P50080 613 aa3.76□□□□□ -1.81
RPN8YOR261C PHB2P50085 310 aa3.76□□□□□ -1.81
RPN8YOR261C RPT4P53549 437 aaKnown RBP3.76□□□□□ -1.81
RPN8YOR261C GIP3Q03016 1276 aa3.76□□□□□ -1.81
RPN8YOR261C ACL4Q03771 387 aa3.76□□□□□ -1.81
RPN8YOR261C DIS3Q08162 1001 aaKnown RBP3.76□□□□□ -1.81
RPN8YOR261C FDH1Q08911 376 aa3.76□□□□□ -1.81
RPN8YOR261C BUG1Q12191 341 aa3.76□□□□□ -1.81
RPN8YOR261C URA4P20051 364 aa3.75□□□□□ -1.81
RPN8YOR261C SPR1P32603 445 aa3.75□□□□□ -1.81
RPN8YOR261C RRN10P38204 145 aa3.75□□□□□ -1.81
RPN8YOR261C YLR152CP54072 576 aa3.75□□□□□ -1.81
RPN8YOR261C YMR130WQ04223 302 aa3.75□□□□□ -1.81
RPN8YOR261C RBD2Q12270 262 aa3.75□□□□□ -1.81
RPN8YOR261C SPO7P18410 259 aa3.74□□□□□ -1.81
RPN8YOR261C BRF1P29056 596 aa3.74□□□□□ -1.81
RPN8YOR261C HXT1P32465 570 aa3.74□□□□□ -1.81
RPN8YOR261C MMS4P38257 691 aa3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms