RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C SAM35P14693 329 aa9.15□□□□□ -0.95
SPT20YOL148C RSM22P36056 628 aa9.15□□□□□ -0.95
SPT20YOL148C REG2P38232 338 aa9.15□□□□□ -0.95
SPT20YOL148C RRF1P38771 230 aa9.15□□□□□ -0.95
SPT20YOL148C VAB2P40003 282 aa9.15□□□□□ -0.95
SPT20YOL148C QDR1P40475 563 aa9.15□□□□□ -0.95
SPT20YOL148C TIM54P47045 478 aa9.15□□□□□ -0.95
SPT20YOL148C JHD2P47156 728 aaPredicted RBP9.15□□□□□ -0.95
SPT20YOL148C MPC1P53157 130 aaKnown RBP9.15□□□□□ -0.95
SPT20YOL148C SLG1P54867 378 aa9.15□□□□□ -0.95
SPT20YOL148C MTD1Q02046 320 aaKnown RBP9.15□□□□□ -0.95
SPT20YOL148C CWC21Q03375 135 aaKnown RBP9.15□□□□□ -0.95
SPT20YOL148C GOT1Q03554 138 aa9.15□□□□□ -0.95
SPT20YOL148C EMI1Q04406 187 aa9.15□□□□□ -0.95
SPT20YOL148C SIR1P21691 654 aa9.14□□□□□ -0.95
SPT20YOL148C AGP2P38090 596 aa9.14□□□□□ -0.95
SPT20YOL148C YHR033WP38690 423 aa9.14□□□□□ -0.95
SPT20YOL148C ACO2P39533 789 aa9.14□□□□□ -0.95
SPT20YOL148C EMP65P40085 556 aa9.14□□□□□ -0.95
SPT20YOL148C SKP2P42843 763 aa9.14□□□□□ -0.95
SPT20YOL148C CAF16P43569 289 aa9.14□□□□□ -0.95
SPT20YOL148C SPT20P50875 604 aa9.14□□□□□ -0.95
SPT20YOL148C GND2P53319 492 aa9.14□□□□□ -0.95
SPT20YOL148C SPP2Q02521 185 aa9.14□□□□□ -0.95
SPT20YOL148C RPP1BP10622 106 aaKnown RBP9.13□□□□□ -0.95
SPT20YOL148C TKL1P23254 680 aaKnown RBP9.13□□□□□ -0.95
SPT20YOL148C PGS1P25578 521 aa9.13□□□□□ -0.95
SPT20YOL148C SNC1P31109 117 aa9.13□□□□□ -0.95
SPT20YOL148C TSL1P38427 1098 aaKnown RBP9.13□□□□□ -0.95
SPT20YOL148C OSH7P38755 437 aa9.13□□□□□ -0.95
SPT20YOL148C NVJ1P38881 321 aa9.13□□□□□ -0.95
SPT20YOL148C PRE6P40303 254 aaKnown RBP9.13□□□□□ -0.95
SPT20YOL148C MPM1P40364 252 aa9.13□□□□□ -0.95
SPT20YOL148C ATG18P43601 500 aa9.13□□□□□ -0.95
SPT20YOL148C YAE1P47118 141 aaPredicted RBP9.13□□□□□ -0.95
SPT20YOL148C RRN9P53437 365 aa9.13□□□□□ -0.95
SPT20YOL148C BRE5P53741 515 aaKnown RBP9.13□□□□□ -0.95
SPT20YOL148C MPS1P54199 764 aa9.13□□□□□ -0.95
SPT20YOL148C TIM44Q01852 431 aa9.13□□□□□ -0.95
SPT20YOL148C CDD1Q06549 142 aa9.13□□□□□ -0.95
SPT20YOL148C SIA1Q12212 622 aa9.13□□□□□ -0.95
SPT20YOL148C YOR012WQ12351 137 aa9.13□□□□□ -0.95
SPT20YOL148C REP2P03872 296 aa9.12□□□□□ -0.95
SPT20YOL148C AAR2P32357 355 aaPredicted RBP9.12□□□□□ -0.95
SPT20YOL148C YBL010CP32788 280 aa9.12□□□□□ -0.95
SPT20YOL148C MRT4P33201 236 aaKnown RBP9.12□□□□□ -0.95
SPT20YOL148C TAT1P38085 619 aa9.12□□□□□ -0.95
SPT20YOL148C ARP1P38696 384 aa9.12□□□□□ -0.95
SPT20YOL148C MDM31P38880 579 aa9.12□□□□□ -0.95
SPT20YOL148C GDI1P39958 451 aaKnown RBP9.12□□□□□ -0.95
SPT20YOL148C DOT6P40059 670 aaKnown RBP9.12□□□□□ -0.95
SPT20YOL148C CAK1P43568 368 aaPredicted RBP9.12□□□□□ -0.95
SPT20YOL148C JJJ3P47138 172 aa9.12□□□□□ -0.95
SPT20YOL148C YGR067CP53243 804 aa9.12□□□□□ -0.95
SPT20YOL148C CDC14Q00684 551 aa9.12□□□□□ -0.95
SPT20YOL148C PEX29Q03370 554 aa9.12□□□□□ -0.95
SPT20YOL148C AEP3Q12089 606 aa9.12□□□□□ -0.95
SPT20YOL148C MRH1Q12117 320 aaPredicted RBP9.12□□□□□ -0.95
SPT20YOL148C SNF8Q12483 233 aa9.12□□□□□ -0.95
SPT20YOL148C YOR131CQ12486 218 aa9.12□□□□□ -0.95
SPT20YOL148C YGL194C-AQ2V2P6 80 aa9.12□□□□□ -0.95
SPT20YOL148C RCY1P39531 840 aa9.12□□□□□ -0.95
SPT20YOL148C HPA3P39979 161 aa9.12□□□□□ -0.95
SPT20YOL148C ERG10P41338 398 aaKnown RBP9.12□□□□□ -0.95
SPT20YOL148C GDS1P41913 522 aa9.12□□□□□ -0.95
SPT20YOL148C BIT61P47041 543 aa9.12□□□□□ -0.95
SPT20YOL148C FDC1Q03034 503 aa9.12□□□□□ -0.95
SPT20YOL148C APC5Q08683 685 aa9.12□□□□□ -0.95
SPT20YOL148C COX5AP00424 153 aa9.11□□□□□ -0.95
SPT20YOL148C PHO80P20052 293 aa9.11□□□□□ -0.95
SPT20YOL148C STB5P38699 743 aa9.11□□□□□ -0.95
SPT20YOL148C EFM1P38732 585 aa9.11□□□□□ -0.95
SPT20YOL148C BFR1P38934 470 aaKnown RBP RIP-Chip data9.11□□□□□ -0.95not detected
SPT20YOL148C FMP52P40008 231 aa9.11□□□□□ -0.95
SPT20YOL148C RRG9P40156 214 aa9.11□□□□□ -0.95
SPT20YOL148C YMR144WP40214 342 aaKnown RBP9.11□□□□□ -0.95
SPT20YOL148C LSB6P42951 607 aa9.11□□□□□ -0.95
SPT20YOL148C CHA4P43634 648 aa9.11□□□□□ -0.95
SPT20YOL148C PMT4P46971 762 aa9.11□□□□□ -0.95
SPT20YOL148C PPT1P53043 513 aa9.11□□□□□ -0.95
SPT20YOL148C IDP3P53982 420 aaKnown RBP9.11□□□□□ -0.95
SPT20YOL148C YDR541CQ03049 344 aa9.11□□□□□ -0.95
SPT20YOL148C GRX8Q05926 109 aa9.11□□□□□ -0.95
SPT20YOL148C YLR352WQ06479 807 aa9.11□□□□□ -0.95
SPT20YOL148C RAD34Q06665 692 aa9.11□□□□□ -0.95
SPT20YOL148C SWC7Q06707 132 aa9.11□□□□□ -0.95
SPT20YOL148C LCB4Q12246 624 aa9.11□□□□□ -0.95
SPT20YOL148C YRM1Q12340 786 aa9.11□□□□□ -0.95
SPT20YOL148C TIF6Q12522 245 aaKnown RBP9.11□□□□□ -0.95
SPT20YOL148C FUM1P08417 488 aaKnown RBP9.1□□□□□ -0.95
SPT20YOL148C FUS3P16892 353 aaKnown RBP9.1□□□□□ -0.95
SPT20YOL148C SDH2P21801 266 aa9.1□□□□□ -0.95
SPT20YOL148C MNE1P24720 663 aa9.1□□□□□ -0.95
SPT20YOL148C HCM1P25364 564 aa9.1□□□□□ -0.95
SPT20YOL148C YCR099CP25657 155 aa9.1□□□□□ -0.95
SPT20YOL148C RAD27P26793 382 aa9.1□□□□□ -0.95
SPT20YOL148C GEP4P38812 185 aa9.1□□□□□ -0.95
SPT20YOL148C DHH1P39517 506 aaKnown RBP9.1□□□□□ -0.95
SPT20YOL148C SLX8P40072 274 aa9.1□□□□□ -0.95
SPT20YOL148C ELO3P40319 345 aa9.1□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms