RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C FAA1P30624 700 aaKnown RBP3.25□□□□□ -1.89
WHI3YNL197C YCR041WP37265 110 aa3.25□□□□□ -1.89
WHI3YNL197C MET30P39014 640 aa3.25□□□□□ -1.89
WHI3YNL197C DHH1P39517 506 aaKnown RBP3.25□□□□□ -1.89
WHI3YNL197C PNG1Q02890 363 aa3.25□□□□□ -1.89
WHI3YNL197C VPS74Q06385 345 aa3.25□□□□□ -1.89
WHI3YNL197C SRL1Q08673 210 aa3.25□□□□□ -1.89
WHI3YNL197C RPL6BP05739 176 aaKnown RBP3.24□□□□□ -1.89
WHI3YNL197C NFT1P0CE68 1218 aa3.24□□□□□ -1.89
WHI3YNL197C YEL043WP32618 956 aa3.24□□□□□ -1.89
WHI3YNL197C LOS1P33418 1100 aaPredicted RBP3.24□□□□□ -1.89
WHI3YNL197C RTT107P38850 1070 aa3.24□□□□□ -1.89
WHI3YNL197C YIL169CP40442 995 aa3.24□□□□□ -1.89
WHI3YNL197C DIM1P41819 318 aaKnown RBP3.24□□□□□ -1.89
WHI3YNL197C RPL6AQ02326 176 aaKnown RBP3.24□□□□□ -1.89
WHI3YNL197C ODC1Q03028 310 aa3.24□□□□□ -1.89
WHI3YNL197C SNA4Q07549 140 aa3.24□□□□□ -1.89
WHI3YNL197C NOP6Q07623 225 aaKnown RBP3.24□□□□□ -1.89
WHI3YNL197C CHS1P08004 1131 aa3.23□□□□□ -1.89
WHI3YNL197C RNA14P25298 677 aaKnown RBP3.23□□□□□ -1.89
WHI3YNL197C YCR100CP25606 316 aa3.23□□□□□ -1.89
WHI3YNL197C YSC83P32792 385 aa3.23□□□□□ -1.89
WHI3YNL197C RIM2P38127 377 aa3.23□□□□□ -1.89
WHI3YNL197C OLA1P38219 394 aaKnown RBP3.23□□□□□ -1.89
WHI3YNL197C QDR3P38227 689 aa3.23□□□□□ -1.89
WHI3YNL197C WSS1P38838 269 aa3.23□□□□□ -1.89
WHI3YNL197C PES4P39684 611 aa3.23□□□□□ -1.89
WHI3YNL197C IKS1P47042 667 aa3.23□□□□□ -1.89
WHI3YNL197C EFM3P47163 339 aa3.23□□□□□ -1.89
WHI3YNL197C YGL082WP53155 381 aa3.23□□□□□ -1.89
WHI3YNL197C PDR16P53860 351 aaKnown RBP3.23□□□□□ -1.89
WHI3YNL197C YPL068CQ02749 293 aa3.23□□□□□ -1.89
WHI3YNL197C YDR541CQ03049 344 aa3.23□□□□□ -1.89
WHI3YNL197C FMP42Q04991 504 aa3.23□□□□□ -1.89
WHI3YNL197C YFH1Q07540 174 aa3.23□□□□□ -1.89
WHI3YNL197C SKI7Q08491 747 aaPredicted RBP3.23□□□□□ -1.89
WHI3YNL197C YPR022CQ12139 1133 aa3.23□□□□□ -1.89
WHI3YNL197C BUG1Q12191 341 aa3.23□□□□□ -1.89
WHI3YNL197C TFB5Q3E7C1 72 aaPredicted RBP3.23□□□□□ -1.89
WHI3YNL197C SPO12P17123 173 aa3.23□□□□□ -1.89
WHI3YNL197C UBA1P22515 1024 aaKnown RBP3.23□□□□□ -1.89
WHI3YNL197C RAD57P25301 460 aa3.23□□□□□ -1.89
WHI3YNL197C PHO91P27514 894 aa3.23□□□□□ -1.89
WHI3YNL197C HSP104P31539 908 aaKnown RBP3.23□□□□□ -1.89
WHI3YNL197C SMI1P32566 505 aa3.23□□□□□ -1.89
WHI3YNL197C YNK1P36010 153 aaKnown RBP3.23□□□□□ -1.89
WHI3YNL197C POP2P39008 433 aa3.23□□□□□ -1.89
WHI3YNL197C HMS2P47175 358 aa3.23□□□□□ -1.89
WHI3YNL197C YIP5P53108 310 aa3.23□□□□□ -1.89
WHI3YNL197C FRE4P53746 719 aa3.23□□□□□ -1.89
WHI3YNL197C UTP6Q02354 440 aaKnown RBP3.23□□□□□ -1.89
WHI3YNL197C YLR281CQ05863 155 aa3.23□□□□□ -1.89
WHI3YNL197C NSE1Q07913 336 aa3.23□□□□□ -1.89
WHI3YNL197C REX3Q12090 404 aa3.23□□□□□ -1.89
WHI3YNL197C RUP1Q12242 671 aa3.23□□□□□ -1.89
WHI3YNL197C ATG34Q12292 412 aa3.23□□□□□ -1.89
WHI3YNL197C RNH203Q12338 110 aa3.23□□□□□ -1.89
WHI3YNL197C SCH9P11792 824 aaKnown RBP3.22□□□□□ -1.89
WHI3YNL197C TRX1P22217 103 aaKnown RBP3.22□□□□□ -1.89
WHI3YNL197C CRM1P30822 1084 aaKnown RBP3.22□□□□□ -1.89
WHI3YNL197C NDC1P32500 655 aa3.22□□□□□ -1.89
WHI3YNL197C GLC7P32598 312 aaKnown RBP3.22□□□□□ -1.89
WHI3YNL197C YKL097CP34245 136 aa3.22□□□□□ -1.89
WHI3YNL197C INM1P38710 295 aa3.22□□□□□ -1.89
WHI3YNL197C RRP3P38712 501 aaKnown RBP3.22□□□□□ -1.89
WHI3YNL197C RPR2P40571 144 aa3.22□□□□□ -1.89
WHI3YNL197C EPL1P43572 832 aa3.22□□□□□ -1.89
WHI3YNL197C RTT101P47050 842 aa3.22□□□□□ -1.89
WHI3YNL197C AVT4P50944 713 aa3.22□□□□□ -1.89
WHI3YNL197C SHE4P51534 789 aa3.22□□□□□ -1.89
WHI3YNL197C YNR048WP53740 393 aa3.22□□□□□ -1.89
WHI3YNL197C PRO2P54885 456 aaKnown RBP3.22□□□□□ -1.89
WHI3YNL197C YLL056CQ12177 298 aa3.22□□□□□ -1.89
WHI3YNL197C PDE2P06776 526 aa3.21□□□□□ -1.89
WHI3YNL197C LSB5P25369 354 aa3.21□□□□□ -1.89
WHI3YNL197C NDI1P32340 513 aa3.21□□□□□ -1.89
WHI3YNL197C CYS4P32582 507 aaKnown RBP3.21□□□□□ -1.89
WHI3YNL197C NRP1P32770 719 aaKnown RBP RIP-Chip data3.21□□□□□ -1.89not detected
WHI3YNL197C RPS0AP32905 252 aaKnown RBP3.21□□□□□ -1.89
WHI3YNL197C MTC4P38335 694 aaKnown RBP3.21□□□□□ -1.89
WHI3YNL197C YHR177WP38867 453 aa3.21□□□□□ -1.89
WHI3YNL197C LYS1P38998 373 aaRIP-Chip data3.21□□□□□ -1.89not detected
WHI3YNL197C PCF11P39081 626 aaPredicted RBP3.21□□□□□ -1.89
WHI3YNL197C SHO1P40073 367 aa3.21□□□□□ -1.89
WHI3YNL197C ELP2P42935 788 aa3.21□□□□□ -1.89
WHI3YNL197C PMT5P52867 743 aa3.21□□□□□ -1.89
WHI3YNL197C YNR068CP53754 272 aa3.21□□□□□ -1.89
WHI3YNL197C YNL143CP53908 130 aa3.21□□□□□ -1.89
WHI3YNL197C YML122CQ03207 126 aa3.21□□□□□ -1.89
WHI3YNL197C IPK1Q06667 281 aa3.21□□□□□ -1.89
WHI3YNL197C SRL2Q12020 392 aa3.21□□□□□ -1.89
WHI3YNL197C YDR061WQ12298 539 aa3.21□□□□□ -1.89
WHI3YNL197C RGT2Q12300 763 aa3.21□□□□□ -1.89
WHI3YNL197C RPL15AP05748 204 aaKnown RBP3.21□□□□□ -1.9
WHI3YNL197C TIP1P27654 210 aaPredicted RBP3.21□□□□□ -1.9
WHI3YNL197C TRS65P32893 560 aa3.21□□□□□ -1.9
WHI3YNL197C PTR2P32901 601 aa3.21□□□□□ -1.9
WHI3YNL197C GDT1P38301 280 aaPredicted RBP3.21□□□□□ -1.9
WHI3YNL197C MNL1P38888 796 aa3.21□□□□□ -1.9
WHI3YNL197C TOS2P50078 622 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms