RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	MNP1	P53163	194 aa	Predicted RBP	3.53	□□□□□ -1.84
TPM1	YNL079C	RPL22B	P56628	122 aa	Known RBP	3.53	□□□□□ -1.84
TPM1	YNL079C	UTP6	Q02354	440 aa	Known RBP	3.53	□□□□□ -1.84
TPM1	YNL079C	SMA1	Q02651	245 aa		3.53	□□□□□ -1.84
TPM1	YNL079C	ERV41	Q04651	352 aa		3.53	□□□□□ -1.84
TPM1	YNL079C	RSF1	Q05043	376 aa		3.53	□□□□□ -1.84
TPM1	YNL079C	YDR278C	Q05612	105 aa		3.53	□□□□□ -1.84
TPM1	YNL079C	ABP140	Q08641	628 aa	Known RBP	3.53	□□□□□ -1.84
TPM1	YNL079C	BUD7	Q08754	746 aa		3.53	□□□□□ -1.84
TPM1	YNL079C	RDR1	Q08904	546 aa		3.53	□□□□□ -1.84
TPM1	YNL079C	YJR112W-A	Q3E743	109 aa		3.53	□□□□□ -1.84
TPM1	YNL079C	ASP3-2	P0CX77	362 aa		3.52	□□□□□ -1.85
TPM1	YNL079C	ASP3-3	P0CX78	362 aa		3.52	□□□□□ -1.85
TPM1	YNL079C	ASP3-4	P0CX79	362 aa		3.52	□□□□□ -1.85
TPM1	YNL079C	ASP3-1	P0CZ17	362 aa		3.52	□□□□□ -1.85
TPM1	YNL079C	MAS2	P11914	482 aa		3.52	□□□□□ -1.85
TPM1	YNL079C	MRP13	P12686	339 aa		3.52	□□□□□ -1.85
TPM1	YNL079C	POX1	P13711	748 aa		3.52	□□□□□ -1.85
TPM1	YNL079C	EST1	P17214	699 aa	Predicted RBP	3.52	□□□□□ -1.85
TPM1	YNL079C	RRT12	P25381	491 aa		3.52	□□□□□ -1.85
TPM1	YNL079C	DEP1	P31385	405 aa		3.52	□□□□□ -1.85
TPM1	YNL079C	SKG6	P32900	734 aa	Predicted RBP	3.52	□□□□□ -1.85
TPM1	YNL079C	RPL32	P38061	130 aa	Known RBP	3.52	□□□□□ -1.85
TPM1	YNL079C	TIF5	P38431	405 aa	Known RBP	3.52	□□□□□ -1.85
TPM1	YNL079C	MSG5	P38590	489 aa		3.52	□□□□□ -1.85
TPM1	YNL079C	MET30	P39014	640 aa		3.52	□□□□□ -1.85
TPM1	YNL079C	YIL169C	P40442	995 aa		3.52	□□□□□ -1.85
TPM1	YNL079C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.52	□□□□□ -1.85	not detected
TPM1	YNL079C	FET5	P43561	622 aa		3.52	□□□□□ -1.85
TPM1	YNL079C	LSC1	P53598	329 aa	Known RBP	3.52	□□□□□ -1.85
TPM1	YNL079C	RPC11	Q04307	110 aa	Predicted RBP	3.52	□□□□□ -1.85
TPM1	YNL079C	MFB1	Q04922	465 aa		3.52	□□□□□ -1.85
TPM1	YNL079C	SHS1	Q07657	551 aa		3.52	□□□□□ -1.85
TPM1	YNL079C	SGT2	Q12118	346 aa	Known RBP	3.52	□□□□□ -1.85
TPM1	YNL079C	BI3	Q9ZZW7	517 aa		3.52	□□□□□ -1.85
TPM1	YNL079C	ARG4	P04076	463 aa	Predicted RBP	3.51	□□□□□ -1.85
TPM1	YNL079C	YML002W	P0CF17	737 aa		3.51	□□□□□ -1.85
TPM1	YNL079C	RPL4A	P10664	362 aa	Known RBP	3.51	□□□□□ -1.85
TPM1	YNL079C	PEP5	P12868	1029 aa		3.51	□□□□□ -1.85
TPM1	YNL079C	PMS1	P14242	873 aa		3.51	□□□□□ -1.85
TPM1	YNL079C	ART10	P18634	518 aa	Known RBP	3.51	□□□□□ -1.85
TPM1	YNL079C	PRR1	P28708	518 aa		3.51	□□□□□ -1.85
TPM1	YNL079C	SNC1	P31109	117 aa		3.51	□□□□□ -1.85
TPM1	YNL079C	YME1	P32795	747 aa		3.51	□□□□□ -1.85
TPM1	YNL079C	GYP6	P32806	458 aa		3.51	□□□□□ -1.85
TPM1	YNL079C	GDT1	P38301	280 aa	Predicted RBP	3.51	□□□□□ -1.85
TPM1	YNL079C	VHC1	P38329	1120 aa		3.51	□□□□□ -1.85
TPM1	YNL079C	LAG1	P38703	411 aa		3.51	□□□□□ -1.85
TPM1	YNL079C	CCT2	P39076	527 aa	Known RBP	3.51	□□□□□ -1.85
TPM1	YNL079C	ERP2	P39704	215 aa		3.51	□□□□□ -1.85
TPM1	YNL079C	NDE1	P40215	560 aa		3.51	□□□□□ -1.85
TPM1	YNL079C	ESL1	P40456	1118 aa		3.51	□□□□□ -1.85
TPM1	YNL079C	MAF1	P41910	395 aa		3.51	□□□□□ -1.85
TPM1	YNL079C	RPL4B	P49626	362 aa	Known RBP	3.51	□□□□□ -1.85
TPM1	YNL079C	YGR066C	P53242	292 aa		3.51	□□□□□ -1.85
TPM1	YNL079C	RBG2	P53295	368 aa	Known RBP	3.51	□□□□□ -1.85
TPM1	YNL079C	IPI3	P53877	555 aa		3.51	□□□□□ -1.85
TPM1	YNL079C	TIM10	P87108	93 aa		3.51	□□□□□ -1.85
TPM1	YNL079C	NUP53	Q03790	475 aa		3.51	□□□□□ -1.85
TPM1	YNL079C	IVY1	Q04934	453 aa		3.51	□□□□□ -1.85
TPM1	YNL079C	YLR281C	Q05863	155 aa		3.51	□□□□□ -1.85
TPM1	YNL079C	BSC1	Q12140	328 aa		3.51	□□□□□ -1.85
TPM1	YNL079C	RTP1	Q12751	981 aa		3.51	□□□□□ -1.85
TPM1	YNL079C	SEY1	Q99287	776 aa		3.51	□□□□□ -1.85
TPM1	YNL079C	COX4	P04037	155 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	SNA3	P14359	133 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	HNM1	P19807	563 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	CLB1	P24868	471 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	GPI10	P30777	616 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	SEF1	P34228	1148 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	PHD1	P36093	366 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	TCD2	P36101	447 aa	Known RBP	3.5	□□□□□ -1.85
TPM1	YNL079C	RPC37	P36121	282 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	SRO77	P38163	1010 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	YHR054C	P38780	354 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	YEL057C	P39983	233 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	SMX2	P40204	77 aa	Known RBP	3.5	□□□□□ -1.85
TPM1	YNL079C	YMR134W	P40207	237 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	ALG5	P40350	334 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	INA22	P40576	216 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	SNZ3	P43545	298 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	SAD1	P43589	448 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	TRS85	P46944	698 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	URB2	P47108	1174 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	IMD4	P50094	524 aa	Known RBP	3.5	□□□□□ -1.85
TPM1	YNL079C	YML6	P51998	286 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	HOP2	P53187	214 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	SMM1	P53720	384 aa	Known RBP	3.5	□□□□□ -1.85
TPM1	YNL079C	SNZ2	P53824	298 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	YMR160W	Q03823	816 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	SXM1	Q04175	944 aa	Known RBP	3.5	□□□□□ -1.85
TPM1	YNL079C	YLR352W	Q06479	807 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	SSK1	Q07084	712 aa		3.5	□□□□□ -1.85
TPM1	YNL079C	NCE102	Q12207	173 aa	RIP-Chip data	3.5	□□□□□ -1.85	not detected
TPM1	YNL079C	RAD10	P06838	210 aa		3.49	□□□□□ -1.85
TPM1	YNL079C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.49	□□□□□ -1.85	not detected
TPM1	YNL079C	PUT4	P15380	627 aa		3.49	□□□□□ -1.85
TPM1	YNL079C	PDA1	P16387	420 aa	Known RBP	3.49	□□□□□ -1.85
TPM1	YNL079C	CBF1	P17106	351 aa		3.49	□□□□□ -1.85
TPM1	YNL079C	GLN3	P18494	730 aa		3.49	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms