RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C SSN8P47821 323 aa4.3□□□□□ -1.72
CUS1YMR240C AVT4P50944 713 aa4.3□□□□□ -1.72
CUS1YMR240C GIP3Q03016 1276 aa4.3□□□□□ -1.72
CUS1YMR240C NDL1Q06568 189 aa4.3□□□□□ -1.72
CUS1YMR240C SKI7Q08491 747 aaPredicted RBP4.3□□□□□ -1.72
CUS1YMR240C YLL056CQ12177 298 aa4.3□□□□□ -1.72
CUS1YMR240C ORT1Q12375 292 aa4.3□□□□□ -1.72
CUS1YMR240C SPT7P35177 1332 aa4.3□□□□□ -1.72
CUS1YMR240C ARG4P04076 463 aaPredicted RBP4.29□□□□□ -1.72
CUS1YMR240C YML002WP0CF17 737 aa4.29□□□□□ -1.72
CUS1YMR240C TIP1P27654 210 aaPredicted RBP4.29□□□□□ -1.72
CUS1YMR240C HSP104P31539 908 aaKnown RBP4.29□□□□□ -1.72
CUS1YMR240C LOS1P33418 1100 aaPredicted RBP4.29□□□□□ -1.72
CUS1YMR240C RTT107P38850 1070 aa4.29□□□□□ -1.72
CUS1YMR240C RPH1P39956 796 aa4.29□□□□□ -1.72
CUS1YMR240C GAT2P40209 560 aa4.29□□□□□ -1.72
CUS1YMR240C MLC1P53141 149 aa4.29□□□□□ -1.72
CUS1YMR240C YGR016WP53209 190 aa4.29□□□□□ -1.72
CUS1YMR240C POP6P53218 158 aa4.29□□□□□ -1.72
CUS1YMR240C RHO5P53879 331 aaKnown RBP4.29□□□□□ -1.72
CUS1YMR240C GPI15P53961 229 aa4.29□□□□□ -1.72
CUS1YMR240C MRP51Q02950 344 aa4.29□□□□□ -1.72
CUS1YMR240C YAP7Q08182 245 aa4.29□□□□□ -1.72
CUS1YMR240C MUM3Q08750 479 aa4.29□□□□□ -1.72
CUS1YMR240C ATG34Q12292 412 aa4.29□□□□□ -1.72
CUS1YMR240C RMD5Q12508 421 aa4.29□□□□□ -1.72
CUS1YMR240C SET6Q12529 373 aa4.29□□□□□ -1.72
CUS1YMR240C ILV5P06168 395 aaKnown RBP4.28□□□□□ -1.72
CUS1YMR240C PDE2P06776 526 aa4.28□□□□□ -1.72
CUS1YMR240C LSB5P25369 354 aa4.28□□□□□ -1.72
CUS1YMR240C PUT3P25502 979 aaPredicted RBP4.28□□□□□ -1.72
CUS1YMR240C ATS1P31386 333 aa4.28□□□□□ -1.72
CUS1YMR240C GDT1P38301 280 aaPredicted RBP4.28□□□□□ -1.72
CUS1YMR240C MLH1P38920 769 aa4.28□□□□□ -1.72
CUS1YMR240C STN1P38960 494 aa4.28□□□□□ -1.72
CUS1YMR240C DHH1P39517 506 aaKnown RBP4.28□□□□□ -1.72
CUS1YMR240C YFR016CP43597 1233 aaKnown RBP4.28□□□□□ -1.72
CUS1YMR240C COS10P52924 374 aa4.28□□□□□ -1.72
CUS1YMR240C YNR048WP53740 393 aa4.28□□□□□ -1.72
CUS1YMR240C FRE4P53746 719 aa4.28□□□□□ -1.72
CUS1YMR240C CAF40P53829 373 aa4.28□□□□□ -1.72
CUS1YMR240C RSN1Q03516 953 aa4.28□□□□□ -1.72
CUS1YMR240C PPM1Q04081 328 aa4.28□□□□□ -1.72
CUS1YMR240C URH1Q04179 340 aa4.28□□□□□ -1.72
CUS1YMR240C YPR022CQ12139 1133 aa4.28□□□□□ -1.72
CUS1YMR240C FRE6Q12473 712 aa4.28□□□□□ -1.72
CUS1YMR240C ALG1P16661 449 aa4.27□□□□□ -1.73
CUS1YMR240C MDM31P38880 579 aa4.27□□□□□ -1.73
CUS1YMR240C YPL107WQ02873 248 aa4.27□□□□□ -1.73
CUS1YMR240C PIR3Q03180 325 aa4.27□□□□□ -1.73
CUS1YMR240C TIM18Q08749 192 aa4.27□□□□□ -1.73
CUS1YMR240C SMF3Q12078 473 aaPredicted RBP4.27□□□□□ -1.73
CUS1YMR240C PKH2Q12236 1081 aaKnown RBP4.27□□□□□ -1.73
CUS1YMR240C HEM2P05373 342 aa4.26□□□□□ -1.73
CUS1YMR240C RPL6BP05739 176 aaKnown RBP4.26□□□□□ -1.73
CUS1YMR240C RNA14P25298 677 aaKnown RBP4.26□□□□□ -1.73
CUS1YMR240C RAD57P25301 460 aa4.26□□□□□ -1.73
CUS1YMR240C DAD2P36162 133 aa4.26□□□□□ -1.73
CUS1YMR240C PCF11P39081 626 aaPredicted RBP4.26□□□□□ -1.73
CUS1YMR240C MST28P39552 234 aa4.26□□□□□ -1.73
CUS1YMR240C PIB2P53191 635 aa4.26□□□□□ -1.73
CUS1YMR240C CRZ1P53968 678 aa4.26□□□□□ -1.73
CUS1YMR240C RPL6AQ02326 176 aaKnown RBP4.26□□□□□ -1.73
CUS1YMR240C BET5Q03630 159 aa4.26□□□□□ -1.73
CUS1YMR240C SNT309Q06091 175 aaPredicted RBP4.26□□□□□ -1.73
CUS1YMR240C NSE1Q07913 336 aa4.26□□□□□ -1.73
CUS1YMR240C TPM1P17536 199 aaKnown RBP4.25□□□□□ -1.73
CUS1YMR240C MSP1P28737 362 aa4.25□□□□□ -1.73
CUS1YMR240C CYS4P32582 507 aaKnown RBP4.25□□□□□ -1.73
CUS1YMR240C MRPL4P36517 319 aa4.25□□□□□ -1.73
CUS1YMR240C PFF1P38244 976 aa4.25□□□□□ -1.73
CUS1YMR240C WSS1P38838 269 aa4.25□□□□□ -1.73
CUS1YMR240C YDL186WP48568 277 aa4.25□□□□□ -1.73
CUS1YMR240C BRO1P48582 844 aa4.25□□□□□ -1.73
CUS1YMR240C YDR541CQ03049 344 aa4.25□□□□□ -1.73
CUS1YMR240C YMR317WQ04893 1140 aa4.25□□□□□ -1.73
CUS1YMR240C YPL199CQ08954 240 aa4.25□□□□□ -1.73
CUS1YMR240C NFI1Q12216 726 aa4.25□□□□□ -1.73
CUS1YMR240C TEF1P02994 458 aaKnown RBP4.24□□□□□ -1.73
CUS1YMR240C IMA3P0CW40 589 aa4.24□□□□□ -1.73
CUS1YMR240C IMA4P0CW41 589 aa4.24□□□□□ -1.73
CUS1YMR240C SAM1P10659 382 aaKnown RBP4.24□□□□□ -1.73
CUS1YMR240C PRP16P15938 1071 aaPredicted RBP4.24□□□□□ -1.73
CUS1YMR240C SAM2P19358 384 aaKnown RBP4.24□□□□□ -1.73
CUS1YMR240C MCK1P21965 375 aaKnown RBP4.24□□□□□ -1.73
CUS1YMR240C ITR1P30605 584 aa4.24□□□□□ -1.73
CUS1YMR240C GPI16P38875 610 aa4.24□□□□□ -1.73
CUS1YMR240C YJL213WP40896 331 aa4.24□□□□□ -1.73
CUS1YMR240C LAM5P43560 674 aa4.24□□□□□ -1.73
CUS1YMR240C MEH1Q02205 184 aa4.24□□□□□ -1.73
CUS1YMR240C IMA2Q08295 589 aa4.24□□□□□ -1.73
CUS1YMR240C NDD1Q08887 554 aa4.24□□□□□ -1.73
CUS1YMR240C RAD61Q99359 647 aa4.24□□□□□ -1.73
CUS1YMR240C SPO12P17123 173 aa4.23□□□□□ -1.73
CUS1YMR240C PHO91P27514 894 aa4.23□□□□□ -1.73
CUS1YMR240C PRO3P32263 286 aaKnown RBP4.23□□□□□ -1.73
CUS1YMR240C ANP1P32629 500 aa4.23□□□□□ -1.73
CUS1YMR240C LAS1P36146 502 aaPredicted RBP4.23□□□□□ -1.73
CUS1YMR240C YSW1P38280 609 aa4.23□□□□□ -1.73
CUS1YMR240C INM1P38710 295 aa4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 50.1 ms