RNA–Protein interactions for RNA: YMR044W

IOC4, Transcript of Member of a complex (Isw1b) with Isw1p and Ioc2p, yeast

Gene IOC4, Length 1,428 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IOC4	YMR044W	SEC62	P21825	274 aa		4.09	□□□□□ -1.75
IOC4	YMR044W	HXT2	P23585	541 aa		4.09	□□□□□ -1.75
IOC4	YMR044W	HMX1	P32339	317 aa		4.09	□□□□□ -1.75
IOC4	YMR044W	ERG7	P38604	731 aa		4.09	□□□□□ -1.75
IOC4	YMR044W	INM1	P38710	295 aa		4.09	□□□□□ -1.75
IOC4	YMR044W	CCT2	P39076	527 aa	Known RBP	4.09	□□□□□ -1.75
IOC4	YMR044W	YER079W	P40052	210 aa	Known RBP	4.09	□□□□□ -1.75
IOC4	YMR044W	YIL060W	P40519	144 aa		4.09	□□□□□ -1.75
IOC4	YMR044W	SNL1	P40548	159 aa		4.09	□□□□□ -1.75
IOC4	YMR044W	BNA3	P47039	444 aa	Known RBP	4.09	□□□□□ -1.75
IOC4	YMR044W	GTO1	P48239	356 aa		4.09	□□□□□ -1.75
IOC4	YMR044W	MND1	P53102	219 aa		4.09	□□□□□ -1.75
IOC4	YMR044W	ASI1	P54074	624 aa		4.09	□□□□□ -1.75
IOC4	YMR044W	STD1	Q02794	444 aa		4.09	□□□□□ -1.75
IOC4	YMR044W	SPO19	Q03029	223 aa		4.09	□□□□□ -1.75
IOC4	YMR044W	RDR1	Q08904	546 aa		4.09	□□□□□ -1.75
IOC4	YMR044W	DCP1	Q12517	231 aa	Predicted RBP	4.09	□□□□□ -1.75
IOC4	YMR044W	SSA3	P09435	649 aa	Known RBP	4.08	□□□□□ -1.76
IOC4	YMR044W	RPI1	P23250	407 aa	Known RBP	4.08	□□□□□ -1.76
IOC4	YMR044W	GSY2	P27472	705 aa		4.08	□□□□□ -1.76
IOC4	YMR044W	ATP11	P32453	318 aa		4.08	□□□□□ -1.76
IOC4	YMR044W	LAG1	P38703	411 aa		4.08	□□□□□ -1.76
IOC4	YMR044W	DRN1	P53255	507 aa	Known RBP	4.08	□□□□□ -1.76
IOC4	YMR044W	RTT102	P53330	157 aa		4.08	□□□□□ -1.76
IOC4	YMR044W	YDR387C	Q04162	555 aa		4.08	□□□□□ -1.76
IOC4	YMR044W	SEG1	Q04279	960 aa		4.08	□□□□□ -1.76
IOC4	YMR044W	ERV41	Q04651	352 aa		4.08	□□□□□ -1.76
IOC4	YMR044W	PIG1	Q06216	648 aa		4.08	□□□□□ -1.76
IOC4	YMR044W	MRPL35	Q06678	367 aa		4.08	□□□□□ -1.76
IOC4	YMR044W	TY3A-G	Q12173	290 aa		4.08	□□□□□ -1.76
IOC4	YMR044W	APC2	Q12440	853 aa		4.08	□□□□□ -1.76
IOC4	YMR044W	RMD5	Q12508	421 aa		4.08	□□□□□ -1.76
IOC4	YMR044W	TY3A-I	Q99219	290 aa		4.08	□□□□□ -1.76
IOC4	YMR044W	CHS1	P08004	1131 aa		4.07	□□□□□ -1.76
IOC4	YMR044W	RAD24	P32641	659 aa		4.07	□□□□□ -1.76
IOC4	YMR044W	RGT1	P32862	1170 aa		4.07	□□□□□ -1.76
IOC4	YMR044W	SPT10	P35208	640 aa		4.07	□□□□□ -1.76
IOC4	YMR044W	TPO5	P36029	618 aa		4.07	□□□□□ -1.76
IOC4	YMR044W	DED81	P38707	554 aa	Known RBP	4.07	□□□□□ -1.76
IOC4	YMR044W	ARN1	P38731	627 aa		4.07	□□□□□ -1.76
IOC4	YMR044W	PRP39	P39682	629 aa	Known RBP	4.07	□□□□□ -1.76
IOC4	YMR044W	ATM1	P40416	690 aa		4.07	□□□□□ -1.76
IOC4	YMR044W	YPS6	P40583	537 aa		4.07	□□□□□ -1.76
IOC4	YMR044W	GCD14	P46959	383 aa	Predicted RBP	4.07	□□□□□ -1.76
IOC4	YMR044W	YJR154W	P47181	346 aa		4.07	□□□□□ -1.76
IOC4	YMR044W	UBP8	P50102	471 aa		4.07	□□□□□ -1.76
IOC4	YMR044W	RIB4	P50861	169 aa	Predicted RBP	4.07	□□□□□ -1.76
IOC4	YMR044W	DBP6	P53734	629 aa	Known RBP	4.07	□□□□□ -1.76
IOC4	YMR044W	APC4	Q04601	652 aa		4.07	□□□□□ -1.76
IOC4	YMR044W	RRG8	Q06109	277 aa		4.07	□□□□□ -1.76
IOC4	YMR044W	VAC14	Q06708	880 aa		4.07	□□□□□ -1.76
IOC4	YMR044W	IRC10	Q08118	586 aa		4.07	□□□□□ -1.76
IOC4	YMR044W	AAD15	Q08361	143 aa		4.07	□□□□□ -1.76
IOC4	YMR044W	FRE7	Q12333	620 aa		4.07	□□□□□ -1.76
IOC4	YMR044W	RPN13	O13563	156 aa		4.06	□□□□□ -1.76
IOC4	YMR044W	YLL053C	P0CD98	152 aa		4.06	□□□□□ -1.76
IOC4	YMR044W	PET123	P17558	318 aa		4.06	□□□□□ -1.76
IOC4	YMR044W	RAD57	P25301	460 aa		4.06	□□□□□ -1.76
IOC4	YMR044W	SMY1	P32364	656 aa	Known RBP	4.06	□□□□□ -1.76
IOC4	YMR044W	APE2	P32454	952 aa	Known RBP	4.06	□□□□□ -1.76
IOC4	YMR044W	RPT5	P33297	434 aa	Known RBP	4.06	□□□□□ -1.76
IOC4	YMR044W	RTT107	P38850	1070 aa		4.06	□□□□□ -1.76
IOC4	YMR044W	YHR177W	P38867	453 aa		4.06	□□□□□ -1.76
IOC4	YMR044W	PAC2	P39937	518 aa		4.06	□□□□□ -1.76
IOC4	YMR044W	SPG5	P42933	373 aa		4.06	□□□□□ -1.76
IOC4	YMR044W	MRK1	P50873	501 aa		4.06	□□□□□ -1.76
IOC4	YMR044W	YGL242C	P53066	181 aa		4.06	□□□□□ -1.76
IOC4	YMR044W	YGL185C	P53100	379 aa		4.06	□□□□□ -1.76
IOC4	YMR044W	FMP30	Q02883	468 aa		4.06	□□□□□ -1.76
IOC4	YMR044W	ARP10	Q04549	284 aa		4.06	□□□□□ -1.76
IOC4	YMR044W	SWF1	Q04629	336 aa		4.06	□□□□□ -1.76
IOC4	YMR044W	ECM7	Q06200	448 aa		4.06	□□□□□ -1.76
IOC4	YMR044W	SSK1	Q07084	712 aa		4.06	□□□□□ -1.76
IOC4	YMR044W	YLL056C	Q12177	298 aa		4.06	□□□□□ -1.76
IOC4	YMR044W	RDL1	Q12305	139 aa	Known RBP	4.06	□□□□□ -1.76
IOC4	YMR044W	LDB17	Q12342	491 aa		4.06	□□□□□ -1.76
IOC4	YMR044W	SUC2	P00724	532 aa		4.05	□□□□□ -1.76
IOC4	YMR044W	DST1	P07273	309 aa		4.05	□□□□□ -1.76
IOC4	YMR044W	BAR1	P12630	587 aa		4.05	□□□□□ -1.76
IOC4	YMR044W	SLM5	P25345	492 aa	Known RBP	4.05	□□□□□ -1.76
IOC4	YMR044W	ICL1	P28240	557 aa	Predicted RBP	4.05	□□□□□ -1.76
IOC4	YMR044W	SNC1	P31109	117 aa		4.05	□□□□□ -1.76
IOC4	YMR044W	YPS1	P32329	569 aa		4.05	□□□□□ -1.76
IOC4	YMR044W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
IOC4	YMR044W	RTC2	P38279	296 aa		4.05	□□□□□ -1.76
IOC4	YMR044W	PET100	P38958	111 aa		4.05	□□□□□ -1.76
IOC4	YMR044W	TRS85	P46944	698 aa		4.05	□□□□□ -1.76
IOC4	YMR044W	KEL2	P50090	882 aa		4.05	□□□□□ -1.76
IOC4	YMR044W	SOL4	P53315	255 aa		4.05	□□□□□ -1.76
IOC4	YMR044W	YPL014W	Q02606	381 aa		4.05	□□□□□ -1.76
IOC4	YMR044W	GIP3	Q03016	1276 aa		4.05	□□□□□ -1.76
IOC4	YMR044W	YPR172W	Q06608	200 aa		4.05	□□□□□ -1.76
IOC4	YMR044W	YDL218W	Q07629	317 aa		4.05	□□□□□ -1.76
IOC4	YMR044W	REX4	Q08237	289 aa		4.05	□□□□□ -1.76
IOC4	YMR044W	YOL107W	Q12239	342 aa		4.05	□□□□□ -1.76
IOC4	YMR044W	RBD2	Q12270	262 aa		4.05	□□□□□ -1.76
IOC4	YMR044W	CHD1	P32657	1468 aa		4.04	□□□□□ -1.76
IOC4	YMR044W	GAL4	P04386	881 aa		4.04	□□□□□ -1.76
IOC4	YMR044W	CDC42	P19073	191 aa		4.04	□□□□□ -1.76
IOC4	YMR044W	SPO11	P23179	398 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 61.3 ms