RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C HEL1P36113 551 aa1.95□□□□□ -2.1
SGD1YLR336C RRN10P38204 145 aa1.95□□□□□ -2.1
SGD1YLR336C LYS1P38998 373 aaRIP-Chip data1.95□□□□□ -2.1not detected
SGD1YLR336C MST28P39552 234 aa1.95□□□□□ -2.1
SGD1YLR336C LCB2P40970 561 aa1.95□□□□□ -2.1
SGD1YLR336C OST1P41543 476 aaKnown RBP1.95□□□□□ -2.1
SGD1YLR336C YJL132WP47014 750 aa1.95□□□□□ -2.1
SGD1YLR336C GIP3Q03016 1276 aa1.95□□□□□ -2.1
SGD1YLR336C HNT3Q08702 217 aa1.95□□□□□ -2.1
SGD1YLR336C YER078W-AQ3E7A2 54 aa1.95□□□□□ -2.1
SGD1YLR336C ADE4P04046 510 aaKnown RBP1.94□□□□□ -2.1
SGD1YLR336C MNE1P24720 663 aa1.94□□□□□ -2.1
SGD1YLR336C NAT2P37293 288 aa1.94□□□□□ -2.1
SGD1YLR336C VHS2P40463 436 aa1.94□□□□□ -2.1
SGD1YLR336C EFM4P40516 257 aa1.94□□□□□ -2.1
SGD1YLR336C MKT1P40850 830 aaKnown RBP1.94□□□□□ -2.1
SGD1YLR336C YNR048WP53740 393 aa1.94□□□□□ -2.1
SGD1YLR336C GPI15P53961 229 aa1.94□□□□□ -2.1
SGD1YLR336C CIK1Q01649 594 aa1.94□□□□□ -2.1
SGD1YLR336C MRP51Q02950 344 aa1.94□□□□□ -2.1
SGD1YLR336C TIM18Q08749 192 aa1.94□□□□□ -2.1
SGD1YLR336C YPL199CQ08954 240 aa1.94□□□□□ -2.1
SGD1YLR336C SPE3Q12074 293 aaKnown RBP1.94□□□□□ -2.1
SGD1YLR336C MTR10Q99189 972 aa1.94□□□□□ -2.1
SGD1YLR336C PMR1P13586 950 aa1.94□□□□□ -2.1
SGD1YLR336C CRM1P30822 1084 aaKnown RBP1.94□□□□□ -2.1
SGD1YLR336C NIP1P32497 812 aaKnown RBP1.94□□□□□ -2.1
SGD1YLR336C MIX23P38162 196 aa1.94□□□□□ -2.1
SGD1YLR336C ZTA1P38230 334 aaKnown RBP1.94□□□□□ -2.1
SGD1YLR336C YBR137WP38276 179 aa1.94□□□□□ -2.1
SGD1YLR336C YAL037WP39728 267 aa1.94□□□□□ -2.1
SGD1YLR336C BUD27P43573 796 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
SGD1YLR336C HXT11P54862 567 aa1.94□□□□□ -2.1
SGD1YLR336C DCI1Q08558 271 aa1.94□□□□□ -2.1
SGD1YLR336C TEF1P02994 458 aaKnown RBP1.93□□□□□ -2.1
SGD1YLR336C HEM15P16622 393 aa1.93□□□□□ -2.1
SGD1YLR336C SPO12P17123 173 aa1.93□□□□□ -2.1
SGD1YLR336C LSB5P25369 354 aa1.93□□□□□ -2.1
SGD1YLR336C FAD1P38913 306 aa1.93□□□□□ -2.1
SGD1YLR336C FAA2P39518 744 aa1.93□□□□□ -2.1
SGD1YLR336C YIL067CP40514 678 aa1.93□□□□□ -2.1
SGD1YLR336C LAM5P43560 674 aa1.93□□□□□ -2.1
SGD1YLR336C BOR1P53838 576 aa1.93□□□□□ -2.1
SGD1YLR336C YLR456WQ06199 204 aa1.93□□□□□ -2.1
SGD1YLR336C SKI7Q08491 747 aaPredicted RBP1.93□□□□□ -2.1
SGD1YLR336C AEP3Q12089 606 aa1.93□□□□□ -2.1
SGD1YLR336C PKH2Q12236 1081 aaKnown RBP1.93□□□□□ -2.1
SGD1YLR336C RPN5Q12250 445 aaKnown RBP1.93□□□□□ -2.1
SGD1YLR336C PAR32Q12515 295 aaKnown RBP1.93□□□□□ -2.1
SGD1YLR336C RAD61Q99359 647 aa1.93□□□□□ -2.1
SGD1YLR336C IMA3P0CW40 589 aa1.93□□□□□ -2.1
SGD1YLR336C IMA4P0CW41 589 aa1.93□□□□□ -2.1
SGD1YLR336C SLY1P22213 666 aa1.93□□□□□ -2.1
SGD1YLR336C TAF12Q03761 539 aa1.93□□□□□ -2.1
SGD1YLR336C IMA2Q08295 589 aa1.93□□□□□ -2.1
SGD1YLR336C YLL056CQ12177 298 aa1.93□□□□□ -2.1
SGD1YLR336C RAD57P25301 460 aa1.92□□□□□ -2.1
SGD1YLR336C RRP7P25368 297 aaPredicted RBP1.92□□□□□ -2.1
SGD1YLR336C LTV1P34078 463 aa1.92□□□□□ -2.1
SGD1YLR336C PEX5P35056 612 aa1.92□□□□□ -2.1
SGD1YLR336C YBR139WP38109 508 aa1.92□□□□□ -2.1
SGD1YLR336C RIB5P38145 238 aa1.92□□□□□ -2.1
SGD1YLR336C IMP4P53941 290 aaKnown RBP1.92□□□□□ -2.1
SGD1YLR336C RSN1Q03516 953 aa1.92□□□□□ -2.1
SGD1YLR336C REX4Q08237 289 aa1.92□□□□□ -2.1
SGD1YLR336C MUM3Q08750 479 aa1.92□□□□□ -2.1
SGD1YLR336C MED2Q12124 431 aa1.92□□□□□ -2.1
SGD1YLR336C RRP12Q12754 1228 aaKnown RBP1.92□□□□□ -2.1
SGD1YLR336C ARG4P04076 463 aaPredicted RBP1.92□□□□□ -2.1
SGD1YLR336C RPL1AP0CX43 217 aaKnown RBP1.92□□□□□ -2.1
SGD1YLR336C RPL1BP0CX44 217 aaKnown RBP1.92□□□□□ -2.1
SGD1YLR336C YKL097CP34245 136 aa1.92□□□□□ -2.1
SGD1YLR336C SWH1P35845 1188 aa1.92□□□□□ -2.1
SGD1YLR336C YBP1P38315 674 aa1.92□□□□□ -2.1
SGD1YLR336C STP2P38704 541 aa1.92□□□□□ -2.1
SGD1YLR336C CCT4P39078 528 aaKnown RBP1.92□□□□□ -2.1
SGD1YLR336C YPS6P40583 537 aa1.92□□□□□ -2.1
SGD1YLR336C CHS6P40955 746 aa1.92□□□□□ -2.1
SGD1YLR336C RPN9Q04062 393 aaKnown RBP1.92□□□□□ -2.1
SGD1YLR336C SGT1Q08446 395 aa1.92□□□□□ -2.1
SGD1YLR336C CPR3P25719 182 aa1.91□□□□□ -2.1
SGD1YLR336C RIM1P32445 135 aaKnown RBP1.91□□□□□ -2.1
SGD1YLR336C RFS1P38234 210 aaKnown RBP1.91□□□□□ -2.1
SGD1YLR336C STN1P38960 494 aa1.91□□□□□ -2.1
SGD1YLR336C GAT2P40209 560 aa1.91□□□□□ -2.1
SGD1YLR336C BET5Q03630 159 aa1.91□□□□□ -2.1
SGD1YLR336C PRP42Q03776 544 aaKnown RBP1.91□□□□□ -2.1
SGD1YLR336C URH1Q04179 340 aa1.91□□□□□ -2.1
SGD1YLR336C TLG2Q08144 397 aa1.91□□□□□ -2.1
SGD1YLR336C SRL2Q12020 392 aa1.91□□□□□ -2.1
SGD1YLR336C CPR4P25334 318 aa1.91□□□□□ -2.1
SGD1YLR336C MDL1P33310 695 aa1.91□□□□□ -2.1
SGD1YLR336C GPI16P38875 610 aa1.91□□□□□ -2.1
SGD1YLR336C YFL067WP43537 175 aa1.91□□□□□ -2.1
SGD1YLR336C SSN8P47821 323 aa1.91□□□□□ -2.1
SGD1YLR336C IBD2P53892 351 aa1.91□□□□□ -2.1
SGD1YLR336C VPS9P54787 451 aa1.91□□□□□ -2.1
SGD1YLR336C YMR181CQ03231 154 aa1.91□□□□□ -2.1
SGD1YLR336C PPM1Q04081 328 aa1.91□□□□□ -2.1
SGD1YLR336C YDR341CQ05506 607 aaKnown RBP1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms