RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W FMS1P50264 508 aa3.23□□□□□ -1.89
SMD2YLR275W VPS72Q03388 795 aa3.23□□□□□ -1.89
SMD2YLR275W RSN1Q03516 953 aa3.23□□□□□ -1.89
SMD2YLR275W REX4Q08237 289 aa3.23□□□□□ -1.89
SMD2YLR275W FDH1Q08911 376 aa3.23□□□□□ -1.89
SMD2YLR275W ORT1Q12375 292 aa3.23□□□□□ -1.89
SMD2YLR275W NFT1P0CE68 1218 aa3.22□□□□□ -1.89
SMD2YLR275W SIN4P32259 974 aa3.22□□□□□ -1.89
SMD2YLR275W HCS1P34243 683 aa3.22□□□□□ -1.89
SMD2YLR275W RFC3P38629 340 aa3.22□□□□□ -1.89
SMD2YLR275W TSR2Q06672 205 aaKnown RBP3.22□□□□□ -1.89
SMD2YLR275W RTN2Q12443 393 aa3.22□□□□□ -1.89
SMD2YLR275W RTP1Q12751 981 aa3.22□□□□□ -1.89
SMD2YLR275W NAT1P12945 854 aaKnown RBP3.21□□□□□ -1.9
SMD2YLR275W BET5Q03630 159 aa3.21□□□□□ -1.9
SMD2YLR275W RMD5Q12508 421 aa3.21□□□□□ -1.9
SMD2YLR275W YOL159C-AQ3E769 90 aa3.21□□□□□ -1.9
SMD2YLR275W CYC3P06182 269 aa3.2□□□□□ -1.9
SMD2YLR275W RED1P14291 827 aa3.2□□□□□ -1.9
SMD2YLR275W CLC1P17891 233 aa3.2□□□□□ -1.9
SMD2YLR275W CLB3P24870 427 aa3.2□□□□□ -1.9
SMD2YLR275W POP5P28005 173 aa3.2□□□□□ -1.9
SMD2YLR275W RML2P32611 393 aa3.2□□□□□ -1.9
SMD2YLR275W SAS3P34218 831 aa3.2□□□□□ -1.9
SMD2YLR275W RPS0BP46654 252 aaKnown RBP3.2□□□□□ -1.9
SMD2YLR275W TAF11Q04226 346 aa3.2□□□□□ -1.9
SMD2YLR275W RRP45Q05636 305 aaKnown RBP3.2□□□□□ -1.9
SMD2YLR275W MDM30Q05930 598 aa3.2□□□□□ -1.9
SMD2YLR275W SKI7Q08491 747 aaPredicted RBP3.2□□□□□ -1.9
SMD2YLR275W HSP42Q12329 375 aa3.2□□□□□ -1.9
SMD2YLR275W ILV5P06168 395 aaKnown RBP3.19□□□□□ -1.9
SMD2YLR275W CTR86P25355 563 aa3.19□□□□□ -1.9
SMD2YLR275W SNT1P25357 1226 aa3.19□□□□□ -1.9
SMD2YLR275W RHB1P25378 209 aa3.19□□□□□ -1.9
SMD2YLR275W KRE2P27809 442 aa3.19□□□□□ -1.9
SMD2YLR275W KAR9P32526 644 aa3.19□□□□□ -1.9
SMD2YLR275W IRC25Q07951 179 aa3.19□□□□□ -1.9
SMD2YLR275W VAM3Q12241 283 aa3.19□□□□□ -1.9
SMD2YLR275W BEM1P29366 551 aa3.18□□□□□ -1.9
SMD2YLR275W ERG3P32353 365 aa3.18□□□□□ -1.9
SMD2YLR275W MRPL10P36520 322 aa3.18□□□□□ -1.9
SMD2YLR275W AZR1P50080 613 aa3.18□□□□□ -1.9
SMD2YLR275W SPO7P18410 259 aa3.17□□□□□ -1.9
SMD2YLR275W PCL1P24867 279 aa3.17□□□□□ -1.9
SMD2YLR275W NTC20P38302 140 aaPredicted RBP3.17□□□□□ -1.9
SMD2YLR275W PCF11P39081 626 aaPredicted RBP3.17□□□□□ -1.9
SMD2YLR275W SSU1P41930 458 aa3.17□□□□□ -1.9
SMD2YLR275W COS5P47187 383 aa3.17□□□□□ -1.9
SMD2YLR275W BRO1P48582 844 aa3.17□□□□□ -1.9
SMD2YLR275W HAL1Q01766 294 aa3.17□□□□□ -1.9
SMD2YLR275W COS7Q07788 383 aa3.17□□□□□ -1.9
SMD2YLR275W RKM1Q08961 583 aaPredicted RBP3.17□□□□□ -1.9
SMD2YLR275W PGA3Q12746 312 aaKnown RBP3.17□□□□□ -1.9
SMD2YLR275W SMY1P32364 656 aaKnown RBP3.16□□□□□ -1.9
SMD2YLR275W HIR2P32480 875 aa3.16□□□□□ -1.9
SMD2YLR275W RPN12P32496 274 aa3.16□□□□□ -1.9
SMD2YLR275W SOR1P35497 357 aaKnown RBP3.16□□□□□ -1.9
SMD2YLR275W UTH1P36135 365 aa3.16□□□□□ -1.9
SMD2YLR275W APE3P37302 537 aaKnown RBP3.16□□□□□ -1.9
SMD2YLR275W PHB2P50085 310 aa3.16□□□□□ -1.9
SMD2YLR275W YGL138CP53122 345 aa3.16□□□□□ -1.9
SMD2YLR275W RHO5P53879 331 aaKnown RBP3.16□□□□□ -1.9
SMD2YLR275W GPI15P53961 229 aa3.16□□□□□ -1.9
SMD2YLR275W TAF12Q03761 539 aa3.16□□□□□ -1.9
SMD2YLR275W TSA2Q04120 196 aa3.16□□□□□ -1.9
SMD2YLR275W COG4Q06096 861 aa3.16□□□□□ -1.9
SMD2YLR275W SOR2Q07786 357 aa3.16□□□□□ -1.9
SMD2YLR275W YRM1Q12340 786 aa3.16□□□□□ -1.9
SMD2YLR275W SCEIP03882 235 aa3.15□□□□□ -1.91
SMD2YLR275W SPO12P17123 173 aa3.15□□□□□ -1.91
SMD2YLR275W SRV2P17555 526 aaKnown RBP3.15□□□□□ -1.91
SMD2YLR275W CLN1P20437 546 aa3.15□□□□□ -1.91
SMD2YLR275W RAD57P25301 460 aa3.15□□□□□ -1.91
SMD2YLR275W GEX1P25596 615 aa3.15□□□□□ -1.91
SMD2YLR275W YME2P32843 850 aa3.15□□□□□ -1.91
SMD2YLR275W YAL037WP39728 267 aa3.15□□□□□ -1.91
SMD2YLR275W JLP2P40206 208 aa3.15□□□□□ -1.91
SMD2YLR275W GIP3Q03016 1276 aa3.15□□□□□ -1.91
SMD2YLR275W BCH1Q05029 724 aa3.15□□□□□ -1.91
SMD2YLR275W CSE2P33308 149 aa3.14□□□□□ -1.91
SMD2YLR275W YHR131CP38835 850 aa3.14□□□□□ -1.91
SMD2YLR275W OAZ1Q02803 292 aa3.14□□□□□ -1.91
SMD2YLR275W ARX1Q03862 593 aaKnown RBP3.14□□□□□ -1.91
SMD2YLR275W YLR287CQ05881 355 aa3.14□□□□□ -1.91
SMD2YLR275W SFI1Q12369 946 aa3.14□□□□□ -1.91
SMD2YLR275W CDC31P06704 161 aaKnown RBP3.13□□□□□ -1.91
SMD2YLR275W NUP2P32499 720 aa3.13□□□□□ -1.91
SMD2YLR275W NPL6P32832 435 aa3.13□□□□□ -1.91
SMD2YLR275W UTP18P40362 594 aaPredicted RBP3.13□□□□□ -1.91
SMD2YLR275W GAB1P41733 394 aa3.13□□□□□ -1.91
SMD2YLR275W PHO86P46956 311 aa3.13□□□□□ -1.91
SMD2YLR275W SFH5P47008 294 aa3.13□□□□□ -1.91
SMD2YLR275W MDE1P47095 244 aa3.13□□□□□ -1.91
SMD2YLR275W SKO1Q02100 647 aa3.13□□□□□ -1.91
SMD2YLR275W CUE5Q08412 411 aaKnown RBP3.13□□□□□ -1.91
SMD2YLR275W SRL2Q12020 392 aa3.13□□□□□ -1.91
SMD2YLR275W YRF1-4O13559 1382 aa3.12□□□□□ -1.91
SMD2YLR275W INH1P01097 85 aa3.12□□□□□ -1.91
SMD2YLR275W NAM2P11325 894 aa3.12□□□□□ -1.91
SMD2YLR275W AIM10P39965 576 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms