RNA–Protein interactions for RNA: YLR247C

IRC20, Transcript of E3 ubiquitin ligase and putative helicase, yeastyeast

Gene IRC20, Length 4,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC20YLR247C PXA1P41909 870 aa1.76□□□□□ -2.13
IRC20YLR247C SNX4P47057 423 aa1.76□□□□□ -2.13
IRC20YLR247C IMD4P50094 524 aaKnown RBP1.76□□□□□ -2.13
IRC20YLR247C MRM2P53123 320 aa1.76□□□□□ -2.13
IRC20YLR247C INN1P53901 409 aa1.76□□□□□ -2.13
IRC20YLR247C UME1Q03010 460 aa1.76□□□□□ -2.13
IRC20YLR247C ECI1Q05871 280 aa1.76□□□□□ -2.13
IRC20YLR247C YLR297WQ05899 129 aa1.76□□□□□ -2.13
IRC20YLR247C RRS1Q08746 203 aaKnown RBP1.76□□□□□ -2.13
IRC20YLR247C BUD7Q08754 746 aa1.76□□□□□ -2.13
IRC20YLR247C VTS1Q08831 523 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
IRC20YLR247C BAG7Q12128 409 aa1.76□□□□□ -2.13
IRC20YLR247C COX3P00420 269 aa1.76□□□□□ -2.13
IRC20YLR247C ARG81P05085 880 aa1.76□□□□□ -2.13
IRC20YLR247C PDE2P06776 526 aa1.76□□□□□ -2.13
IRC20YLR247C CYT1P07143 309 aa1.76□□□□□ -2.13
IRC20YLR247C ILV2P07342 687 aaKnown RBP1.76□□□□□ -2.13
IRC20YLR247C MATALPHA2P0CY08 210 aa1.76□□□□□ -2.13
IRC20YLR247C HMLALPHA2P0CY09 210 aa1.76□□□□□ -2.13
IRC20YLR247C ADH4P10127 382 aa1.76□□□□□ -2.13
IRC20YLR247C NOP1P15646 327 aaKnown RBP1.76□□□□□ -2.13
IRC20YLR247C PMA2P19657 947 aa1.76□□□□□ -2.13
IRC20YLR247C KGD1P20967 1014 aaKnown RBP1.76□□□□□ -2.13
IRC20YLR247C BAS1P22035 811 aa1.76□□□□□ -2.13
IRC20YLR247C RRP7P25368 297 aaPredicted RBP1.76□□□□□ -2.13
IRC20YLR247C DMC1P25453 334 aa1.76□□□□□ -2.13
IRC20YLR247C DCC1P25559 380 aa1.76□□□□□ -2.13
IRC20YLR247C NAM9P27929 486 aa1.76□□□□□ -2.13
IRC20YLR247C POP5P28005 173 aa1.76□□□□□ -2.13
IRC20YLR247C RPN12P32496 274 aa1.76□□□□□ -2.13
IRC20YLR247C YME2P32843 850 aa1.76□□□□□ -2.13
IRC20YLR247C HIS7P33734 552 aaKnown RBP1.76□□□□□ -2.13
IRC20YLR247C PHD1P36093 366 aa1.76□□□□□ -2.13
IRC20YLR247C YMC2P38087 329 aa1.76□□□□□ -2.13
IRC20YLR247C POP7P38291 140 aa1.76□□□□□ -2.13
IRC20YLR247C QNS1P38795 714 aaKnown RBP1.76□□□□□ -2.13
IRC20YLR247C LSM12P38828 187 aaKnown RBP1.76□□□□□ -2.13
IRC20YLR247C PDS1P40316 373 aaPredicted RBP1.76□□□□□ -2.13
IRC20YLR247C QDR2P40474 542 aa1.76□□□□□ -2.13
IRC20YLR247C GAB1P41733 394 aa1.76□□□□□ -2.13
IRC20YLR247C YJL107CP42947 387 aa1.76□□□□□ -2.13
IRC20YLR247C JSN1P47135 1091 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13 RIP-Chip
IRC20YLR247C YGR042WP53227 271 aa1.76□□□□□ -2.13
IRC20YLR247C SYF2P53277 215 aaPredicted RBP1.76□□□□□ -2.13
IRC20YLR247C MPA43P53583 542 aaPredicted RBP1.76□□□□□ -2.13
IRC20YLR247C RHO5P53879 331 aaKnown RBP1.76□□□□□ -2.13
IRC20YLR247C MTD1Q02046 320 aaKnown RBP1.76□□□□□ -2.13
IRC20YLR247C LGE1Q02796 332 aaKnown RBP1.76□□□□□ -2.13
IRC20YLR247C NHX1Q04121 633 aa1.76□□□□□ -2.13
IRC20YLR247C ARA2Q04212 335 aa1.76□□□□□ -2.13
IRC20YLR247C GIS4Q04233 774 aa1.76□□□□□ -2.13
IRC20YLR247C CIA1Q05583 330 aa1.76□□□□□ -2.13
IRC20YLR247C PRP11Q07350 266 aaPredicted RBP1.76□□□□□ -2.13
IRC20YLR247C YDR056CQ12025 205 aa1.76□□□□□ -2.13
IRC20YLR247C HAL9Q12180 1030 aa1.76□□□□□ -2.13
IRC20YLR247C RAS2P01120 322 aaKnown RBP1.76□□□□□ -2.13
IRC20YLR247C REP1P03871 373 aa1.76□□□□□ -2.13
IRC20YLR247C RPL24AP04449 155 aaKnown RBP1.76□□□□□ -2.13
IRC20YLR247C CDC9P04819 755 aa1.76□□□□□ -2.13
IRC20YLR247C RPL1AP0CX43 217 aaKnown RBP1.76□□□□□ -2.13
IRC20YLR247C RPL1BP0CX44 217 aaKnown RBP1.76□□□□□ -2.13
IRC20YLR247C ASP3-2P0CX77 362 aa1.76□□□□□ -2.13
IRC20YLR247C ASP3-3P0CX78 362 aa1.76□□□□□ -2.13
IRC20YLR247C ASP3-4P0CX79 362 aa1.76□□□□□ -2.13
IRC20YLR247C ASP3-1P0CZ17 362 aa1.76□□□□□ -2.13
IRC20YLR247C SFL1P20134 766 aa1.76□□□□□ -2.13
IRC20YLR247C SEC62P21825 274 aa1.76□□□□□ -2.13
IRC20YLR247C ISC10P32645 267 aa1.76□□□□□ -2.13
IRC20YLR247C TIF3P34167 436 aaKnown RBP1.76□□□□□ -2.13
IRC20YLR247C KAE1P36132 386 aa1.76□□□□□ -2.13
IRC20YLR247C MRPL10P36520 322 aa1.76□□□□□ -2.13
IRC20YLR247C ALG3P38179 458 aa1.76□□□□□ -2.13
IRC20YLR247C SHG1P38337 142 aa1.76□□□□□ -2.13
IRC20YLR247C TSL1P38427 1098 aaKnown RBP1.76□□□□□ -2.13
IRC20YLR247C PPX1P38698 397 aa1.76□□□□□ -2.13
IRC20YLR247C STT3P39007 718 aaKnown RBP1.76□□□□□ -2.13
IRC20YLR247C RBG1P39729 369 aa1.76□□□□□ -2.13
IRC20YLR247C YEN1P40028 759 aa1.76□□□□□ -2.13
IRC20YLR247C STB1P42845 420 aa1.76□□□□□ -2.13
IRC20YLR247C NSE4P43124 402 aa1.76□□□□□ -2.13
IRC20YLR247C YFL054CP43549 646 aa1.76□□□□□ -2.13
IRC20YLR247C AVT1P47082 602 aa1.76□□□□□ -2.13
IRC20YLR247C YJR039WP47107 1121 aa1.76□□□□□ -2.13
IRC20YLR247C BUL1P48524 976 aa1.76□□□□□ -2.13
IRC20YLR247C VEL1P53058 206 aa1.76□□□□□ -2.13
IRC20YLR247C YGL159WP53110 370 aa1.76□□□□□ -2.13
IRC20YLR247C PKP2P53170 491 aa1.76□□□□□ -2.13
IRC20YLR247C NGL2Q03264 515 aaKnown RBP1.76□□□□□ -2.13
IRC20YLR247C UGO1Q03327 502 aa1.76□□□□□ -2.13
IRC20YLR247C DLT1Q04216 342 aa1.76□□□□□ -2.13
IRC20YLR247C FMP45Q07651 309 aa1.76□□□□□ -2.13
IRC20YLR247C RSB1Q08417 382 aa1.76□□□□□ -2.13
IRC20YLR247C YOR365CQ08844 703 aa1.76□□□□□ -2.13
IRC20YLR247C RTK1Q12100 620 aaPredicted RBP1.76□□□□□ -2.13
IRC20YLR247C POL2P21951 2222 aaKnown RBP1.76□□□□□ -2.13
IRC20YLR247C COR1P07256 457 aa1.75□□□□□ -2.13
IRC20YLR247C FUM1P08417 488 aaKnown RBP1.75□□□□□ -2.13
IRC20YLR247C SPS1P08458 490 aa1.75□□□□□ -2.13
IRC20YLR247C NAT1P12945 854 aaKnown RBP1.75□□□□□ -2.13
IRC20YLR247C ISY1P21374 235 aaPredicted RBP1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms