RNA–Protein interactions for RNA: YLR066W

SPC3, Transcript of Subunit of signal peptidase complex, yeast

Gene SPC3, Length 555 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC3	YLR066W	LYS1	P38998	373 aa	RIP-Chip data	4.24	□□□□□ -1.73	not detected
SPC3	YLR066W	GAT2	P40209	560 aa		4.24	□□□□□ -1.73
SPC3	YLR066W	GCD10	P41814	478 aa		4.24	□□□□□ -1.73
SPC3	YLR066W	HMS2	P47175	358 aa		4.24	□□□□□ -1.73
SPC3	YLR066W	RHO5	P53879	331 aa	Known RBP	4.24	□□□□□ -1.73
SPC3	YLR066W	GPI15	P53961	229 aa		4.24	□□□□□ -1.73
SPC3	YLR066W	ARK1	P53974	638 aa		4.24	□□□□□ -1.73
SPC3	YLR066W	YPL107W	Q02873	248 aa		4.24	□□□□□ -1.73
SPC3	YLR066W	PPM1	Q04081	328 aa		4.24	□□□□□ -1.73
SPC3	YLR066W	SKI7	Q08491	747 aa	Predicted RBP	4.24	□□□□□ -1.73
SPC3	YLR066W	MUM3	Q08750	479 aa		4.24	□□□□□ -1.73
SPC3	YLR066W	SMF3	Q12078	473 aa	Predicted RBP	4.24	□□□□□ -1.73
SPC3	YLR066W	ARG4	P04076	463 aa	Predicted RBP	4.23	□□□□□ -1.73
SPC3	YLR066W	RPL6B	P05739	176 aa	Known RBP	4.23	□□□□□ -1.73
SPC3	YLR066W	RPL20A	P0CX23	172 aa	Known RBP	4.23	□□□□□ -1.73
SPC3	YLR066W	RPL20B	P0CX24	172 aa	Predicted RBP	4.23	□□□□□ -1.73
SPC3	YLR066W	TPM1	P17536	199 aa	Known RBP	4.23	□□□□□ -1.73
SPC3	YLR066W	RAD57	P25301	460 aa		4.23	□□□□□ -1.73
SPC3	YLR066W	YCR022C	P25620	114 aa		4.23	□□□□□ -1.73
SPC3	YLR066W	GLC7	P32598	312 aa	Known RBP	4.23	□□□□□ -1.73
SPC3	YLR066W	RRP1	P35178	278 aa	Predicted RBP	4.23	□□□□□ -1.73
SPC3	YLR066W	RTT107	P38850	1070 aa		4.23	□□□□□ -1.73
SPC3	YLR066W	STN1	P38960	494 aa		4.23	□□□□□ -1.73
SPC3	YLR066W	PCF11	P39081	626 aa	Predicted RBP	4.23	□□□□□ -1.73
SPC3	YLR066W	YPS6	P40583	537 aa		4.23	□□□□□ -1.73
SPC3	YLR066W	POP6	P53218	158 aa		4.23	□□□□□ -1.73
SPC3	YLR066W	YNR048W	P53740	393 aa		4.23	□□□□□ -1.73
SPC3	YLR066W	RPL6A	Q02326	176 aa	Known RBP	4.23	□□□□□ -1.73
SPC3	YLR066W	YDR541C	Q03049	344 aa		4.23	□□□□□ -1.73
SPC3	YLR066W	URH1	Q04179	340 aa		4.23	□□□□□ -1.73
SPC3	YLR066W	ATG34	Q12292	412 aa		4.23	□□□□□ -1.73
SPC3	YLR066W	FRE6	Q12473	712 aa		4.23	□□□□□ -1.73
SPC3	YLR066W	RPL15A	P05748	204 aa	Known RBP	4.22	□□□□□ -1.73
SPC3	YLR066W	LSB5	P25369	354 aa		4.22	□□□□□ -1.73
SPC3	YLR066W	TIP1	P27654	210 aa	Predicted RBP	4.22	□□□□□ -1.73
SPC3	YLR066W	ANP1	P32629	500 aa		4.22	□□□□□ -1.73
SPC3	YLR066W	MTC4	P38335	694 aa	Known RBP	4.22	□□□□□ -1.73
SPC3	YLR066W	RRP4	P38792	359 aa	Known RBP	4.22	□□□□□ -1.73
SPC3	YLR066W	WSS1	P38838	269 aa		4.22	□□□□□ -1.73
SPC3	YLR066W	MLH1	P38920	769 aa		4.22	□□□□□ -1.73
SPC3	YLR066W	BRO1	P48582	844 aa		4.22	□□□□□ -1.73
SPC3	YLR066W	AVT4	P50944	713 aa		4.22	□□□□□ -1.73
SPC3	YLR066W	CAF40	P53829	373 aa		4.22	□□□□□ -1.73
SPC3	YLR066W	RSN1	Q03516	953 aa		4.22	□□□□□ -1.73
SPC3	YLR066W	NSE1	Q07913	336 aa		4.22	□□□□□ -1.73
SPC3	YLR066W	TIM18	Q08749	192 aa		4.22	□□□□□ -1.73
SPC3	YLR066W	PKH2	Q12236	1081 aa	Known RBP	4.22	□□□□□ -1.73
SPC3	YLR066W	ALG1	P16661	449 aa		4.21	□□□□□ -1.74
SPC3	YLR066W	MDM31	P38880	579 aa		4.21	□□□□□ -1.74
SPC3	YLR066W	RRT5	P43607	289 aa		4.21	□□□□□ -1.74
SPC3	YLR066W	YFH1	Q07540	174 aa		4.21	□□□□□ -1.74
SPC3	YLR066W	ORT1	Q12375	292 aa		4.21	□□□□□ -1.74
SPC3	YLR066W	RMD5	Q12508	421 aa		4.21	□□□□□ -1.74
SPC3	YLR066W	SET6	Q12529	373 aa		4.21	□□□□□ -1.74
SPC3	YLR066W	ILV5	P06168	395 aa	Known RBP	4.2	□□□□□ -1.74
SPC3	YLR066W	PRP16	P15938	1071 aa	Predicted RBP	4.2	□□□□□ -1.74
SPC3	YLR066W	PHO84	P25297	587 aa	Known RBP	4.2	□□□□□ -1.74
SPC3	YLR066W	CYS4	P32582	507 aa	Known RBP	4.2	□□□□□ -1.74
SPC3	YLR066W	MRPL4	P36517	319 aa		4.2	□□□□□ -1.74
SPC3	YLR066W	PFF1	P38244	976 aa		4.2	□□□□□ -1.74
SPC3	YLR066W	RPH1	P39956	796 aa		4.2	□□□□□ -1.74
SPC3	YLR066W	RPR2	P40571	144 aa		4.2	□□□□□ -1.74
SPC3	YLR066W	LAM5	P43560	674 aa		4.2	□□□□□ -1.74
SPC3	YLR066W	EPL1	P43572	832 aa		4.2	□□□□□ -1.74
SPC3	YLR066W	ATP22	P50273	684 aa	Predicted RBP	4.2	□□□□□ -1.74
SPC3	YLR066W	PIB2	P53191	635 aa		4.2	□□□□□ -1.74
SPC3	YLR066W	FRE4	P53746	719 aa		4.2	□□□□□ -1.74
SPC3	YLR066W	CRZ1	P53968	678 aa		4.2	□□□□□ -1.74
SPC3	YLR066W	PIR3	Q03180	325 aa		4.2	□□□□□ -1.74
SPC3	YLR066W	BET5	Q03630	159 aa		4.2	□□□□□ -1.74
SPC3	YLR066W	CUE5	Q08412	411 aa	Known RBP	4.2	□□□□□ -1.74
SPC3	YLR066W	YPL199C	Q08954	240 aa		4.2	□□□□□ -1.74
SPC3	YLR066W	PGC1	Q08959	321 aa		4.2	□□□□□ -1.74
SPC3	YLR066W	YPR022C	Q12139	1133 aa		4.2	□□□□□ -1.74
SPC3	YLR066W	NFI1	Q12216	726 aa		4.2	□□□□□ -1.74
SPC3	YLR066W	AYT1	Q12226	474 aa		4.2	□□□□□ -1.74
SPC3	YLR066W	YDR061W	Q12298	539 aa		4.2	□□□□□ -1.74
SPC3	YLR066W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.2	□□□□□ -1.74
SPC3	YLR066W	SRN2	Q99176	213 aa		4.2	□□□□□ -1.74
SPC3	YLR066W	KRR1	P25586	316 aa	Predicted RBP	4.19	□□□□□ -1.74
SPC3	YLR066W	PHO91	P27514	894 aa		4.19	□□□□□ -1.74
SPC3	YLR066W	LAS1	P36146	502 aa	Predicted RBP	4.19	□□□□□ -1.74
SPC3	YLR066W	YSW1	P38280	609 aa		4.19	□□□□□ -1.74
SPC3	YLR066W	INM1	P38710	295 aa		4.19	□□□□□ -1.74
SPC3	YLR066W	DHH1	P39517	506 aa	Known RBP	4.19	□□□□□ -1.74
SPC3	YLR066W	MST28	P39552	234 aa		4.19	□□□□□ -1.74
SPC3	YLR066W	PAC11	P40960	533 aa		4.19	□□□□□ -1.74
SPC3	YLR066W	ASN2	P49090	572 aa	Known RBP	4.19	□□□□□ -1.74
SPC3	YLR066W	BTN2	P53286	410 aa		4.19	□□□□□ -1.74
SPC3	YLR066W	MMT1	Q03218	510 aa		4.19	□□□□□ -1.74
SPC3	YLR066W	SRL2	Q12020	392 aa		4.19	□□□□□ -1.74
SPC3	YLR066W	TEF1	P02994	458 aa	Known RBP	4.18	□□□□□ -1.74
SPC3	YLR066W	CDC21	P06785	304 aa		4.18	□□□□□ -1.74
SPC3	YLR066W	IMA3	P0CW40	589 aa		4.18	□□□□□ -1.74
SPC3	YLR066W	IMA4	P0CW41	589 aa		4.18	□□□□□ -1.74
SPC3	YLR066W	RNA14	P25298	677 aa	Known RBP	4.18	□□□□□ -1.74
SPC3	YLR066W	LOS1	P33418	1100 aa	Predicted RBP	4.18	□□□□□ -1.74
SPC3	YLR066W	UIP5	P36137	443 aa		4.18	□□□□□ -1.74
SPC3	YLR066W	GPI16	P38875	610 aa		4.18	□□□□□ -1.74
SPC3	YLR066W	YJL213W	P40896	331 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 288.2 ms