RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C GPD2P41911 440 aaKnown RBP1.56□□□□□ -2.16
RPL40BYKR094C YIP1P53039 248 aa1.56□□□□□ -2.16
RPL40BYKR094C FLC3P53121 802 aa1.56□□□□□ -2.16
RPL40BYKR094C YMR181CQ03231 154 aa1.56□□□□□ -2.16
RPL40BYKR094C YMR155WQ03795 547 aa1.56□□□□□ -2.16
RPL40BYKR094C MRD1Q06106 887 aaKnown RBP1.56□□□□□ -2.16
RPL40BYKR094C YPR022CQ12139 1133 aa1.56□□□□□ -2.16
RPL40BYKR094C PKH2Q12236 1081 aaKnown RBP1.56□□□□□ -2.16
RPL40BYKR094C IZH2Q12442 317 aa1.56□□□□□ -2.16
RPL40BYKR094C RTN2Q12443 393 aa1.56□□□□□ -2.16
RPL40BYKR094C AVL9Q12500 764 aa1.56□□□□□ -2.16
RPL40BYKR094C SMC6Q12749 1114 aa1.56□□□□□ -2.16
RPL40BYKR094C YPT6Q99260 215 aa1.56□□□□□ -2.16
RPL40BYKR094C SRV2P17555 526 aaKnown RBP1.55□□□□□ -2.16
RPL40BYKR094C ROX1P25042 368 aa1.55□□□□□ -2.16
RPL40BYKR094C GPI10P30777 616 aa1.55□□□□□ -2.16
RPL40BYKR094C SMY1P32364 656 aaKnown RBP1.55□□□□□ -2.16
RPL40BYKR094C VMA8P32610 256 aaKnown RBP1.55□□□□□ -2.16
RPL40BYKR094C NFU1P32860 256 aa1.55□□□□□ -2.16
RPL40BYKR094C SPT10P35208 640 aa1.55□□□□□ -2.16
RPL40BYKR094C APE3P37302 537 aaKnown RBP1.55□□□□□ -2.16
RPL40BYKR094C RCK2P38623 610 aa1.55□□□□□ -2.16
RPL40BYKR094C MNP1P53163 194 aaPredicted RBP1.55□□□□□ -2.16
RPL40BYKR094C SLG1P54867 378 aa1.55□□□□□ -2.16
RPL40BYKR094C MRPS16Q02608 121 aa1.55□□□□□ -2.16
RPL40BYKR094C ERO1Q03103 563 aa1.55□□□□□ -2.16
RPL40BYKR094C PDS5Q04264 1277 aa1.55□□□□□ -2.16
RPL40BYKR094C TIM18Q08749 192 aa1.55□□□□□ -2.16
RPL40BYKR094C ATG29Q12092 213 aa1.55□□□□□ -2.16
RPL40BYKR094C RLM1Q12224 676 aa1.55□□□□□ -2.16
RPL40BYKR094C YRF1-4O13559 1382 aa1.55□□□□□ -2.16
RPL40BYKR094C PDX1P16451 410 aa1.54□□□□□ -2.16
RPL40BYKR094C CLC1P17891 233 aa1.54□□□□□ -2.16
RPL40BYKR094C ERG3P32353 365 aa1.54□□□□□ -2.16
RPL40BYKR094C MUD1P32605 298 aaKnown RBP1.54□□□□□ -2.16
RPL40BYKR094C RML2P32611 393 aa1.54□□□□□ -2.16
RPL40BYKR094C IES6P32617 166 aa1.54□□□□□ -2.16
RPL40BYKR094C TFB1P32776 642 aa1.54□□□□□ -2.16
RPL40BYKR094C CMC1P36064 111 aa1.54□□□□□ -2.16
RPL40BYKR094C TCD2P36101 447 aaKnown RBP1.54□□□□□ -2.16
RPL40BYKR094C SMF1P38925 575 aa1.54□□□□□ -2.16
RPL40BYKR094C PET130P47065 347 aa1.54□□□□□ -2.16
RPL40BYKR094C YGR018CP53211 109 aa1.54□□□□□ -2.16
RPL40BYKR094C RSC1P53236 928 aa1.54□□□□□ -2.16
RPL40BYKR094C TWF1P53250 332 aa1.54□□□□□ -2.16
RPL40BYKR094C CRH1P53301 507 aa1.54□□□□□ -2.16
RPL40BYKR094C MKC7P53379 596 aa1.54□□□□□ -2.16
RPL40BYKR094C RMT2Q03305 412 aa1.54□□□□□ -2.16
RPL40BYKR094C RCF1Q03713 159 aa1.54□□□□□ -2.16
RPL40BYKR094C FIN1Q03898 291 aa1.54□□□□□ -2.16
RPL40BYKR094C SOV1Q04748 898 aa1.54□□□□□ -2.16
RPL40BYKR094C RPL3P14126 387 aaKnown RBP1.53□□□□□ -2.16
RPL40BYKR094C SNT1P25357 1226 aa1.53□□□□□ -2.16
RPL40BYKR094C RPC53P25441 422 aa1.53□□□□□ -2.16
RPL40BYKR094C FMT1P32785 401 aa1.53□□□□□ -2.16
RPL40BYKR094C SAS3P34218 831 aa1.53□□□□□ -2.16
RPL40BYKR094C CBP4P37267 147 aa1.53□□□□□ -2.16
RPL40BYKR094C YEL057CP39983 233 aa1.53□□□□□ -2.16
RPL40BYKR094C MET18P40469 1032 aa1.53□□□□□ -2.16
RPL40BYKR094C MET28P40573 187 aa1.53□□□□□ -2.16
RPL40BYKR094C HXT14P42833 540 aa1.53□□□□□ -2.16
RPL40BYKR094C OCA1P50946 238 aaPredicted RBP1.53□□□□□ -2.16
RPL40BYKR094C CAF130P53280 1122 aaPredicted RBP1.53□□□□□ -2.16
RPL40BYKR094C CIK1Q01649 594 aa1.53□□□□□ -2.16
RPL40BYKR094C RQC1Q05468 723 aaKnown RBP1.53□□□□□ -2.16
RPL40BYKR094C VTA1Q06263 330 aa1.53□□□□□ -2.16
RPL40BYKR094C DNL4Q08387 944 aaPredicted RBP1.53□□□□□ -2.16
RPL40BYKR094C ADH1P00330 348 aaKnown RBP1.52□□□□□ -2.17
RPL40BYKR094C HOM3P10869 527 aa1.52□□□□□ -2.17
RPL40BYKR094C SWI3P32591 825 aa1.52□□□□□ -2.17
RPL40BYKR094C MRE11P32829 692 aa1.52□□□□□ -2.17
RPL40BYKR094C WBP1P33767 430 aaKnown RBP1.52□□□□□ -2.17
RPL40BYKR094C PMT1P33775 817 aa1.52□□□□□ -2.17
RPL40BYKR094C NTC20P38302 140 aaPredicted RBP1.52□□□□□ -2.17
RPL40BYKR094C SGN1P40561 250 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
RPL40BYKR094C DLD2P46681 530 aaKnown RBP1.52□□□□□ -2.17
RPL40BYKR094C YJL055WP47044 245 aa1.52□□□□□ -2.17
RPL40BYKR094C ATP22P50273 684 aaPredicted RBP1.52□□□□□ -2.17
RPL40BYKR094C YML6P51998 286 aa1.52□□□□□ -2.17
RPL40BYKR094C JJJ1P53863 590 aa1.52□□□□□ -2.17
RPL40BYKR094C DIA1P54005 336 aa1.52□□□□□ -2.17
RPL40BYKR094C VPS9P54787 451 aa1.52□□□□□ -2.17
RPL40BYKR094C LIP2Q06005 328 aa1.52□□□□□ -2.17
RPL40BYKR094C YRM1Q12340 786 aa1.52□□□□□ -2.17
RPL40BYKR094C GRX6Q12438 231 aa1.52□□□□□ -2.17
RPL40BYKR094C SEC39Q12745 709 aa1.52□□□□□ -2.17
RPL40BYKR094C AFI1Q99222 893 aa1.52□□□□□ -2.17
RPL40BYKR094C SPT7P35177 1332 aa1.51□□□□□ -2.17
RPL40BYKR094C COX4P04037 155 aa1.51□□□□□ -2.17
RPL40BYKR094C SPS4P09937 338 aa1.51□□□□□ -2.17
RPL40BYKR094C MNE1P24720 663 aa1.51□□□□□ -2.17
RPL40BYKR094C CLB1P24868 471 aa1.51□□□□□ -2.17
RPL40BYKR094C YCR051WP25631 222 aa1.51□□□□□ -2.17
RPL40BYKR094C HIR2P32480 875 aa1.51□□□□□ -2.17
RPL40BYKR094C REC114P32841 428 aa1.51□□□□□ -2.17
RPL40BYKR094C RTC2P38279 296 aa1.51□□□□□ -2.17
RPL40BYKR094C GDI1P39958 451 aaKnown RBP1.51□□□□□ -2.17
RPL40BYKR094C LSM5P40089 93 aaKnown RBP1.51□□□□□ -2.17
RPL40BYKR094C JEM1P40358 645 aa1.51□□□□□ -2.17
RPL40BYKR094C ZIM17P42844 174 aa1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms