RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W MET17P06106 444 aa3.99□□□□□ -1.77
PTM1YKL039W SPB1P25582 841 aaPredicted RBP3.99□□□□□ -1.77
PTM1YKL039W FUN19P28003 413 aaPredicted RBP3.99□□□□□ -1.77
PTM1YKL039W FRE2P36033 711 aa3.99□□□□□ -1.77
PTM1YKL039W RRT5P43607 289 aa3.99□□□□□ -1.77
PTM1YKL039W RSA1Q08932 381 aa3.99□□□□□ -1.77
PTM1YKL039W CKA1P15790 372 aa3.98□□□□□ -1.77
PTM1YKL039W ROX1P25042 368 aa3.98□□□□□ -1.77
PTM1YKL039W SMF1P38925 575 aa3.98□□□□□ -1.77
PTM1YKL039W AVT4P50944 713 aa3.98□□□□□ -1.77
PTM1YKL039W MRPL19P53875 158 aa3.98□□□□□ -1.77
PTM1YKL039W PIR3Q03180 325 aa3.98□□□□□ -1.77
PTM1YKL039W COG4Q06096 861 aa3.98□□□□□ -1.77
PTM1YKL039W LEU4P06208 619 aaKnown RBP3.97□□□□□ -1.77
PTM1YKL039W ATP10P18496 279 aa3.97□□□□□ -1.77
PTM1YKL039W KRE2P27809 442 aa3.97□□□□□ -1.77
PTM1YKL039W YBR139WP38109 508 aa3.97□□□□□ -1.77
PTM1YKL039W YBP1P38315 674 aa3.97□□□□□ -1.77
PTM1YKL039W YPI1P43587 155 aa3.97□□□□□ -1.77
PTM1YKL039W ART5P53244 586 aaKnown RBP3.97□□□□□ -1.77
PTM1YKL039W SOV1Q04748 898 aa3.97□□□□□ -1.77
PTM1YKL039W YER078W-AQ3E7A2 54 aa3.97□□□□□ -1.77
PTM1YKL039W HIP1P06775 603 aa3.97□□□□□ -1.77
PTM1YKL039W RHO2P06781 192 aa3.97□□□□□ -1.77
PTM1YKL039W CPR1P14832 162 aaKnown RBP3.97□□□□□ -1.77
PTM1YKL039W RAD14P28519 371 aa3.97□□□□□ -1.77
PTM1YKL039W NDI1P32340 513 aa3.97□□□□□ -1.77
PTM1YKL039W RPN12P32496 274 aa3.97□□□□□ -1.77
PTM1YKL039W RSM22P36056 628 aa3.97□□□□□ -1.77
PTM1YKL039W THI2P38141 450 aa3.97□□□□□ -1.77
PTM1YKL039W NAB3P38996 802 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
PTM1YKL039W MKT1P40850 830 aaKnown RBP3.97□□□□□ -1.77
PTM1YKL039W TRS85P46944 698 aa3.97□□□□□ -1.77
PTM1YKL039W YGR149WP48236 432 aa3.97□□□□□ -1.77
PTM1YKL039W OGG1P53397 376 aaPredicted RBP3.97□□□□□ -1.77
PTM1YKL039W TSR2Q06672 205 aaKnown RBP3.97□□□□□ -1.77
PTM1YKL039W AFG1P32317 509 aa3.96□□□□□ -1.78
PTM1YKL039W CBP4P37267 147 aa3.96□□□□□ -1.78
PTM1YKL039W ISC1P40015 477 aaKnown RBP3.96□□□□□ -1.78
PTM1YKL039W SPG5P42933 373 aa3.96□□□□□ -1.78
PTM1YKL039W CAF40P53829 373 aa3.96□□□□□ -1.78
PTM1YKL039W TAF11Q04226 346 aa3.96□□□□□ -1.78
PTM1YKL039W FLO11P08640 1367 aa3.96□□□□□ -1.78
PTM1YKL039W CHS1P08004 1131 aa3.95□□□□□ -1.78
PTM1YKL039W GLC7P32598 312 aaKnown RBP3.95□□□□□ -1.78
PTM1YKL039W TFG2P41896 400 aaPredicted RBP3.95□□□□□ -1.78
PTM1YKL039W PRP42Q03776 544 aaKnown RBP3.95□□□□□ -1.78
PTM1YKL039W PGA3Q12746 312 aaKnown RBP3.95□□□□□ -1.78
PTM1YKL039W RTP1Q12751 981 aa3.95□□□□□ -1.78
PTM1YKL039W YPR117WQ06116 2489 aa3.95□□□□□ -1.78
PTM1YKL039W CRM1P30822 1084 aaKnown RBP3.94□□□□□ -1.78
PTM1YKL039W HXT3P32466 567 aaKnown RBP3.94□□□□□ -1.78
PTM1YKL039W MRP4P32902 394 aa3.94□□□□□ -1.78
PTM1YKL039W SDS24P38314 527 aa3.94□□□□□ -1.78
PTM1YKL039W POP6P53218 158 aa3.94□□□□□ -1.78
PTM1YKL039W YNL050CP53952 270 aa3.94□□□□□ -1.78
PTM1YKL039W RTN2Q12443 393 aa3.94□□□□□ -1.78
PTM1YKL039W SAC3P46674 1301 aa3.94□□□□□ -1.78
PTM1YKL039W FLO1P32768 1537 aa3.94□□□□□ -1.78
PTM1YKL039W CDC31P06704 161 aaKnown RBP3.93□□□□□ -1.78
PTM1YKL039W SPS4P09937 338 aa3.93□□□□□ -1.78
PTM1YKL039W YCR100CP25606 316 aa3.93□□□□□ -1.78
PTM1YKL039W IDH2P28241 369 aaKnown RBP3.93□□□□□ -1.78
PTM1YKL039W ERG3P32353 365 aa3.93□□□□□ -1.78
PTM1YKL039W GYP6P32806 458 aa3.93□□□□□ -1.78
PTM1YKL039W RFS1P38234 210 aaKnown RBP3.93□□□□□ -1.78
PTM1YKL039W CCT2P39076 527 aaKnown RBP3.93□□□□□ -1.78
PTM1YKL039W NCS2P53923 493 aaPredicted RBP3.93□□□□□ -1.78
PTM1YKL039W ODC1Q03028 310 aa3.93□□□□□ -1.78
PTM1YKL039W YOL159C-AQ3E769 90 aa3.93□□□□□ -1.78
PTM1YKL039W YAR066WP0CX18 203 aa3.93□□□□□ -1.78
PTM1YKL039W YHR214WP0CX19 203 aa3.93□□□□□ -1.78
PTM1YKL039W RED1P14291 827 aa3.93□□□□□ -1.78
PTM1YKL039W HEM15P16622 393 aa3.93□□□□□ -1.78
PTM1YKL039W PPH22P23595 377 aa3.93□□□□□ -1.78
PTM1YKL039W YIM1P28625 365 aa3.93□□□□□ -1.78
PTM1YKL039W NIP100P33420 868 aa3.93□□□□□ -1.78
PTM1YKL039W YCR041WP37265 110 aa3.93□□□□□ -1.78
PTM1YKL039W YFL040WP43562 540 aa3.93□□□□□ -1.78
PTM1YKL039W RMD9P53140 646 aaKnown RBP3.93□□□□□ -1.78
PTM1YKL039W RPA49Q01080 415 aaPredicted RBP3.93□□□□□ -1.78
PTM1YKL039W MDM1Q01846 1127 aa3.93□□□□□ -1.78
PTM1YKL039W YDL144CQ07589 356 aa3.93□□□□□ -1.78
PTM1YKL039W THP3Q12049 470 aaKnown RBP3.93□□□□□ -1.78
PTM1YKL039W RPL3P14126 387 aaKnown RBP3.92□□□□□ -1.78
PTM1YKL039W OTU2P38747 307 aaKnown RBP3.92□□□□□ -1.78
PTM1YKL039W SPL2P38839 148 aa3.92□□□□□ -1.78
PTM1YKL039W YIL067CP40514 678 aa3.92□□□□□ -1.78
PTM1YKL039W RPT4P53549 437 aaKnown RBP3.92□□□□□ -1.78
PTM1YKL039W PNG1Q02890 363 aa3.92□□□□□ -1.78
PTM1YKL039W PRP21P32524 280 aaPredicted RBP3.91□□□□□ -1.78
PTM1YKL039W REC114P32841 428 aa3.91□□□□□ -1.78
PTM1YKL039W VTC2P43585 828 aa3.91□□□□□ -1.78
PTM1YKL039W GIR2Q03768 265 aaPredicted RBP3.91□□□□□ -1.78
PTM1YKL039W TY3A-GQ12173 290 aa3.91□□□□□ -1.78
PTM1YKL039W ERV2Q12284 196 aa3.91□□□□□ -1.78
PTM1YKL039W TY3A-IQ99219 290 aa3.91□□□□□ -1.78
PTM1YKL039W NAT2P37293 288 aa3.9□□□□□ -1.78
PTM1YKL039W DLD2P46681 530 aaKnown RBP3.9□□□□□ -1.78
PTM1YKL039W YIP1P53039 248 aa3.9□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms