RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C LRE1P25579 583 aaKnown RBP2.07□□□□□ -2.08
UFD4YKL010C GEX1P25596 615 aa2.07□□□□□ -2.08
UFD4YKL010C THI4P32318 326 aa2.07□□□□□ -2.08
UFD4YKL010C AAR2P32357 355 aaPredicted RBP2.07□□□□□ -2.08
UFD4YKL010C CSE2P33308 149 aa2.07□□□□□ -2.08
UFD4YKL010C GEX2P36173 615 aa2.07□□□□□ -2.08
UFD4YKL010C FES1P38260 290 aa2.07□□□□□ -2.08
UFD4YKL010C ARP1P38696 384 aa2.07□□□□□ -2.08
UFD4YKL010C ZRG8P40021 1076 aa2.07□□□□□ -2.08
UFD4YKL010C ALG8P40351 577 aa2.07□□□□□ -2.08
UFD4YKL010C COS4P43542 379 aa2.07□□□□□ -2.08
UFD4YKL010C RPS0BP46654 252 aaKnown RBP2.07□□□□□ -2.08
UFD4YKL010C AMA1P50082 593 aa2.07□□□□□ -2.08
UFD4YKL010C BIO5P53744 561 aaKnown RBP2.07□□□□□ -2.08
UFD4YKL010C VAC7P53950 1165 aa2.07□□□□□ -2.08
UFD4YKL010C SPC19Q03954 165 aa2.07□□□□□ -2.08
UFD4YKL010C YMR226CQ05016 267 aaKnown RBP2.07□□□□□ -2.08
UFD4YKL010C REH1Q06709 432 aa2.07□□□□□ -2.08
UFD4YKL010C SAM4Q08985 325 aaKnown RBP2.07□□□□□ -2.08
UFD4YKL010C YPQ1Q12010 308 aa2.07□□□□□ -2.08
UFD4YKL010C YGK3Q12222 375 aaPredicted RBP2.07□□□□□ -2.08
UFD4YKL010C PST1Q12355 444 aa2.07□□□□□ -2.08
UFD4YKL010C MHF1Q3E835 90 aa2.07□□□□□ -2.08
UFD4YKL010C DPM1P14020 267 aaKnown RBP2.07□□□□□ -2.08
UFD4YKL010C MRPL33P20084 86 aa2.07□□□□□ -2.08
UFD4YKL010C SGV1P23293 657 aaKnown RBP2.07□□□□□ -2.08
UFD4YKL010C BRF1P29056 596 aa2.07□□□□□ -2.08
UFD4YKL010C CAT2P32796 670 aaKnown RBP2.07□□□□□ -2.08
UFD4YKL010C ZRT3P34240 503 aa2.07□□□□□ -2.08
UFD4YKL010C YKL151CP36059 337 aa2.07□□□□□ -2.08
UFD4YKL010C SCO2P38072 301 aa2.07□□□□□ -2.08
UFD4YKL010C GCV1P48015 400 aa2.07□□□□□ -2.08
UFD4YKL010C MDM34P53083 459 aa2.07□□□□□ -2.08
UFD4YKL010C AIM14P53109 570 aa2.07□□□□□ -2.08
UFD4YKL010C EFM5P53200 248 aaKnown RBP2.07□□□□□ -2.08
UFD4YKL010C ZRG17P53735 605 aa2.07□□□□□ -2.08
UFD4YKL010C CSN9Q03981 162 aa2.07□□□□□ -2.08
UFD4YKL010C ARP10Q04549 284 aa2.07□□□□□ -2.08
UFD4YKL010C SSL1Q04673 461 aaPredicted RBP2.07□□□□□ -2.08
UFD4YKL010C ESC8Q08119 714 aa2.07□□□□□ -2.08
UFD4YKL010C BUD7Q08754 746 aa2.07□□□□□ -2.08
UFD4YKL010C YOR387CQ08910 206 aa2.07□□□□□ -2.08
UFD4YKL010C NTO1Q12311 748 aa2.07□□□□□ -2.08
UFD4YKL010C YPR1Q12458 312 aa2.07□□□□□ -2.08
UFD4YKL010C SFG1Q12507 346 aa2.07□□□□□ -2.08
UFD4YKL010C MRP10O75012 95 aa2.06□□□□□ -2.08
UFD4YKL010C TRP3P00937 484 aa2.06□□□□□ -2.08
UFD4YKL010C FUM1P08417 488 aaKnown RBP2.06□□□□□ -2.08
UFD4YKL010C ERG20P08524 352 aaKnown RBP2.06□□□□□ -2.08
UFD4YKL010C PRE7P23724 241 aaKnown RBP2.06□□□□□ -2.08
UFD4YKL010C ITR2P30606 609 aa2.06□□□□□ -2.08
UFD4YKL010C KKQ8P36004 724 aa2.06□□□□□ -2.08
UFD4YKL010C YCR087C-AP37263 153 aa2.06□□□□□ -2.08
UFD4YKL010C GPX2P38143 162 aa2.06□□□□□ -2.08
UFD4YKL010C BMT2P38278 337 aa2.06□□□□□ -2.08
UFD4YKL010C DUN1P39009 513 aa2.06□□□□□ -2.08
UFD4YKL010C BUR6P40096 142 aa2.06□□□□□ -2.08
UFD4YKL010C SER33P40510 469 aa2.06□□□□□ -2.08
UFD4YKL010C ELP2P42935 788 aa2.06□□□□□ -2.08
UFD4YKL010C FAR7P43592 221 aa2.06□□□□□ -2.08
UFD4YKL010C PMT4P46971 762 aa2.06□□□□□ -2.08
UFD4YKL010C YAE1P47118 141 aaPredicted RBP2.06□□□□□ -2.08
UFD4YKL010C YJR149WP47177 404 aa2.06□□□□□ -2.08
UFD4YKL010C MRH4P53166 561 aa2.06□□□□□ -2.08
UFD4YKL010C GOR1P53839 350 aa2.06□□□□□ -2.08
UFD4YKL010C TDA7P53882 636 aaPredicted RBP2.06□□□□□ -2.08
UFD4YKL010C YNL034WP53963 612 aa2.06□□□□□ -2.08
UFD4YKL010C CWC21Q03375 135 aaKnown RBP2.06□□□□□ -2.08
UFD4YKL010C ASR1Q06834 288 aa2.06□□□□□ -2.08
UFD4YKL010C SGO1Q08490 590 aa2.06□□□□□ -2.08
UFD4YKL010C MRX4Q12467 430 aa2.06□□□□□ -2.08
UFD4YKL010C RPS17AP02407 136 aaKnown RBP2.06□□□□□ -2.08
UFD4YKL010C RSR1P13856 272 aa2.06□□□□□ -2.08
UFD4YKL010C RPS17BP14127 136 aaKnown RBP2.06□□□□□ -2.08
UFD4YKL010C PRI2P20457 528 aa2.06□□□□□ -2.08
UFD4YKL010C SYP1P25623 870 aaKnown RBP2.06□□□□□ -2.08
UFD4YKL010C ADK2P26364 225 aa2.06□□□□□ -2.08
UFD4YKL010C PPZ1P26570 692 aa2.06□□□□□ -2.08
UFD4YKL010C NAB2P32505 525 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
UFD4YKL010C SGE1P33335 543 aa2.06□□□□□ -2.08
UFD4YKL010C MTC2P34246 357 aa2.06□□□□□ -2.08
UFD4YKL010C ADD66P36040 267 aa2.06□□□□□ -2.08
UFD4YKL010C KTR4P38131 464 aa2.06□□□□□ -2.08
UFD4YKL010C CCZ1P38273 704 aa2.06□□□□□ -2.08
UFD4YKL010C RGI2P40188 164 aa2.06□□□□□ -2.08
UFD4YKL010C JLP2P40206 208 aa2.06□□□□□ -2.08
UFD4YKL010C SSY5P47002 699 aa2.06□□□□□ -2.08
UFD4YKL010C GTO1P48239 356 aa2.06□□□□□ -2.08
UFD4YKL010C YGR250CP53316 781 aaKnown RBP2.06□□□□□ -2.08
UFD4YKL010C NUP116Q02630 1113 aa2.06□□□□□ -2.08
UFD4YKL010C GCN5Q03330 439 aa2.06□□□□□ -2.08
UFD4YKL010C YMR034CQ05131 434 aaPredicted RBP2.06□□□□□ -2.08
UFD4YKL010C SSK1Q07084 712 aa2.06□□□□□ -2.08
UFD4YKL010C HRK1Q08732 759 aaKnown RBP2.06□□□□□ -2.08
UFD4YKL010C TGL5Q12043 749 aa2.06□□□□□ -2.08
UFD4YKL010C YDL199CQ12407 687 aa2.06□□□□□ -2.08
UFD4YKL010C CYC1P00044 109 aaPredicted RBP2.06□□□□□ -2.08
UFD4YKL010C CAN1P04817 590 aa2.06□□□□□ -2.08
UFD4YKL010C GUK1P15454 187 aaKnown RBP2.06□□□□□ -2.08
UFD4YKL010C BEM1P29366 551 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms