RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C PRP2P20095 876 aaPredicted RBP3.93□□□□□ -1.78
SDS3YIL084C RPS2P25443 254 aaKnown RBP3.93□□□□□ -1.78
SDS3YIL084C ECM15P35195 104 aa3.93□□□□□ -1.78
SDS3YIL084C CMC1P36064 111 aa3.93□□□□□ -1.78
SDS3YIL084C RIM2P38127 377 aa3.93□□□□□ -1.78
SDS3YIL084C DUG2P38149 878 aa3.93□□□□□ -1.78
SDS3YIL084C BNA4P38169 460 aa3.93□□□□□ -1.78
SDS3YIL084C MUM2P38236 366 aa3.93□□□□□ -1.78
SDS3YIL084C OTU2P38747 307 aaKnown RBP3.93□□□□□ -1.78
SDS3YIL084C MET18P40469 1032 aa3.93□□□□□ -1.78
SDS3YIL084C FIS1P40515 155 aa3.93□□□□□ -1.78
SDS3YIL084C DIM1P41819 318 aaKnown RBP3.93□□□□□ -1.78
SDS3YIL084C EPL1P43572 832 aa3.93□□□□□ -1.78
SDS3YIL084C CWC21Q03375 135 aaKnown RBP3.93□□□□□ -1.78
SDS3YIL084C TAF11Q04226 346 aa3.93□□□□□ -1.78
SDS3YIL084C RPC11Q04307 110 aaPredicted RBP3.93□□□□□ -1.78
SDS3YIL084C YLR287CQ05881 355 aa3.93□□□□□ -1.78
SDS3YIL084C YDL007C-AQ2V2Q0 85 aa3.93□□□□□ -1.78
SDS3YIL084C HAP2P06774 265 aa3.92□□□□□ -1.78
SDS3YIL084C RAD52P06778 471 aaKnown RBP3.92□□□□□ -1.78
SDS3YIL084C RPL4AP10664 362 aaKnown RBP3.92□□□□□ -1.78
SDS3YIL084C CDC23P16522 626 aa3.92□□□□□ -1.78
SDS3YIL084C ROX1P25042 368 aa3.92□□□□□ -1.78
SDS3YIL084C SAS3P34218 831 aa3.92□□□□□ -1.78
SDS3YIL084C YPT35P38815 214 aaKnown RBP3.92□□□□□ -1.78
SDS3YIL084C RTT107P38850 1070 aa3.92□□□□□ -1.78
SDS3YIL084C YER130CP39959 443 aa3.92□□□□□ -1.78
SDS3YIL084C AIM22P47051 409 aa3.92□□□□□ -1.78
SDS3YIL084C RPL4BP49626 362 aaKnown RBP3.92□□□□□ -1.78
SDS3YIL084C MNP1P53163 194 aaPredicted RBP3.92□□□□□ -1.78
SDS3YIL084C CAF130P53280 1122 aaPredicted RBP3.92□□□□□ -1.78
SDS3YIL084C JJJ1P53863 590 aa3.92□□□□□ -1.78
SDS3YIL084C ALG11P53954 548 aaKnown RBP3.92□□□□□ -1.78
SDS3YIL084C SLG1P54867 378 aa3.92□□□□□ -1.78
SDS3YIL084C PRP8P33334 2413 aaKnown RBP3.92□□□□□ -1.78
SDS3YIL084C ATP1P07251 545 aaKnown RBP3.91□□□□□ -1.78
SDS3YIL084C COR1P07256 457 aa3.91□□□□□ -1.78
SDS3YIL084C GPI10P30777 616 aa3.91□□□□□ -1.78
SDS3YIL084C SEC66P33754 206 aa3.91□□□□□ -1.78
SDS3YIL084C YBR056WP38081 501 aa3.91□□□□□ -1.78
SDS3YIL084C TCM62P38228 572 aaKnown RBP3.91□□□□□ -1.78
SDS3YIL084C YAT2P40017 923 aa3.91□□□□□ -1.78
SDS3YIL084C YER186CP40101 306 aa3.91□□□□□ -1.78
SDS3YIL084C CHS6P40955 746 aa3.91□□□□□ -1.78
SDS3YIL084C HXT14P42833 540 aa3.91□□□□□ -1.78
SDS3YIL084C VTC2P43585 828 aa3.91□□□□□ -1.78
SDS3YIL084C RTT102P53330 157 aa3.91□□□□□ -1.78
SDS3YIL084C PGA2P53903 129 aa3.91□□□□□ -1.78
SDS3YIL084C YNL146WP53906 100 aa3.91□□□□□ -1.78
SDS3YIL084C SPC19Q03954 165 aa3.91□□□□□ -1.78
SDS3YIL084C CSM3Q04659 317 aa3.91□□□□□ -1.78
SDS3YIL084C IVY1Q04934 453 aa3.91□□□□□ -1.78
SDS3YIL084C SHS1Q07657 551 aa3.91□□□□□ -1.78
SDS3YIL084C DNL4Q08387 944 aaPredicted RBP3.91□□□□□ -1.78
SDS3YIL084C SCM3Q12334 223 aa3.91□□□□□ -1.78
SDS3YIL084C SFI1Q12369 946 aa3.91□□□□□ -1.78
SDS3YIL084C GCN1P33892 2672 aaKnown RBP3.91□□□□□ -1.78
SDS3YIL084C CAR1P00812 333 aaKnown RBP3.9□□□□□ -1.79
SDS3YIL084C RPL31BP0C2H9 113 aaKnown RBP3.9□□□□□ -1.79
SDS3YIL084C YCR007CP25354 239 aa3.9□□□□□ -1.79
SDS3YIL084C ELO2P25358 347 aa3.9□□□□□ -1.79
SDS3YIL084C PRR1P28708 518 aa3.9□□□□□ -1.79
SDS3YIL084C PMT1P33775 817 aa3.9□□□□□ -1.79
SDS3YIL084C HMT1P38074 348 aa3.9□□□□□ -1.79
SDS3YIL084C SIF2P38262 535 aa3.9□□□□□ -1.79
SDS3YIL084C SMF1P38925 575 aa3.9□□□□□ -1.79
SDS3YIL084C MBB1P39534 108 aa3.9□□□□□ -1.79
SDS3YIL084C YJL070CP40361 888 aa3.9□□□□□ -1.79
SDS3YIL084C MEP2P41948 499 aa3.9□□□□□ -1.79
SDS3YIL084C RQC1Q05468 723 aaKnown RBP3.9□□□□□ -1.79
SDS3YIL084C YLH47Q06493 454 aa3.9□□□□□ -1.79
SDS3YIL084C NRT1Q08485 598 aa3.9□□□□□ -1.79
SDS3YIL084C IES4Q08561 116 aa3.9□□□□□ -1.79
SDS3YIL084C RTN2Q12443 393 aa3.9□□□□□ -1.79
SDS3YIL084C POL2P21951 2222 aaKnown RBP3.9□□□□□ -1.79
SDS3YIL084C FUR1P18562 216 aaKnown RBP3.89□□□□□ -1.79
SDS3YIL084C EXO70P19658 623 aa3.89□□□□□ -1.79
SDS3YIL084C SGV1P23293 657 aaKnown RBP3.89□□□□□ -1.79
SDS3YIL084C SCD6P45978 349 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
SDS3YIL084C IKS1P47042 667 aa3.89□□□□□ -1.79
SDS3YIL084C DRN1P53255 507 aaKnown RBP3.89□□□□□ -1.79
SDS3YIL084C HRT3Q12347 344 aa3.89□□□□□ -1.79
SDS3YIL084C RAD50P12753 1312 aa3.89□□□□□ -1.79
SDS3YIL084C SUC2P00724 532 aa3.88□□□□□ -1.79
SDS3YIL084C VPS1P21576 704 aaKnown RBP3.88□□□□□ -1.79
SDS3YIL084C SEC1P30619 724 aaKnown RBP3.88□□□□□ -1.79
SDS3YIL084C VPH1P32563 840 aaKnown RBP3.88□□□□□ -1.79
SDS3YIL084C NPL6P32832 435 aa3.88□□□□□ -1.79
SDS3YIL084C MSN2P33748 704 aa3.88□□□□□ -1.79
SDS3YIL084C CBP4P37267 147 aa3.88□□□□□ -1.79
SDS3YIL084C YGL138CP53122 345 aa3.88□□□□□ -1.79
SDS3YIL084C GPI1P53306 609 aa3.88□□□□□ -1.79
SDS3YIL084C NCS2P53923 493 aaPredicted RBP3.88□□□□□ -1.79
SDS3YIL084C IMP4P53941 290 aaKnown RBP3.88□□□□□ -1.79
SDS3YIL084C CRZ1P53968 678 aa3.88□□□□□ -1.79
SDS3YIL084C ADA2Q02336 434 aa3.88□□□□□ -1.79
SDS3YIL084C HER2Q03557 464 aa3.88□□□□□ -1.79
SDS3YIL084C GYL1Q04322 720 aa3.88□□□□□ -1.79
SDS3YIL084C LSP1Q12230 341 aaKnown RBP3.88□□□□□ -1.79
SDS3YIL084C PMS1P14242 873 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms