RNA–Protein interactions for RNA: YGR194C

XKS1, Transcript of Xylulokinase, yeast

Gene XKS1, Length 1,803 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XKS1	YGR194C	SUN4	P53616	420 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	YNR068C	P53754	272 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	ALG11	P53954	548 aa	Known RBP	4.23	□□□□□ -1.73
XKS1	YGR194C	TOF2	Q02208	771 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	TAF12	Q03761	539 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	DLT1	Q04216	342 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	DCS1	Q06151	350 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	YPS7	Q06325	596 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	VPS36	Q06696	566 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	YLR031W	Q07978	186 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	PEX27	Q08580	376 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	ENV7	Q12003	364 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	YPR027C	Q12079	277 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	YGK3	Q12222	375 aa	Predicted RBP	4.23	□□□□□ -1.73
XKS1	YGR194C	YDR061W	Q12298	539 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	ZPS1	Q12512	249 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	YPL247C	Q12523	523 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	LAG2	Q92325	660 aa		4.23	□□□□□ -1.73
XKS1	YGR194C	RIF1	P29539	1916 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	URA3	P03962	267 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	RAD7	P06779	565 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	WHI2	P12611	486 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	RPB4	P20433	221 aa	Predicted RBP	4.22	□□□□□ -1.73
XKS1	YGR194C	RFA1	P22336	621 aa	Known RBP	4.22	□□□□□ -1.73
XKS1	YGR194C	SED4	P25365	1065 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	SGF29	P25554	259 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	LRE1	P25579	583 aa	Known RBP	4.22	□□□□□ -1.73
XKS1	YGR194C	BEM1	P29366	551 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	SPT14	P32363	452 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	COX13	P32799	129 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	TAF14	P35189	244 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	MCR1	P36060	302 aa	Known RBP	4.22	□□□□□ -1.73
XKS1	YGR194C	TVP38	P36164	337 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	FMP23	P38231	175 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	FSH1	P38777	243 aa	Known RBP	4.22	□□□□□ -1.73
XKS1	YGR194C	PPE1	P38796	400 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	MSS4	P38994	779 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	HMF1	P40037	129 aa	Known RBP	4.22	□□□□□ -1.73
XKS1	YGR194C	DDI1	P40087	428 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	SOK1	P40317	901 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	ARF3	P40994	183 aa	RIP-Chip data	4.22	□□□□□ -1.73	not detected
XKS1	YGR194C	BST1	P43571	1029 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	BUD13	P46947	266 aa	Predicted RBP	4.22	□□□□□ -1.73
XKS1	YGR194C	COG1	P53079	417 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	YKR011C	Q02209	353 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	NGL2	Q03264	515 aa	Known RBP	4.22	□□□□□ -1.73
XKS1	YGR194C	CWC21	Q03375	135 aa	Known RBP	4.22	□□□□□ -1.73
XKS1	YGR194C	MZM1	Q03429	123 aa	Predicted RBP	4.22	□□□□□ -1.73
XKS1	YGR194C	VTA1	Q06263	330 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	MLC2	Q06580	163 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	RSC3	Q06639	885 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	GRS2	Q06817	618 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	DIS3	Q08162	1001 aa	Known RBP	4.22	□□□□□ -1.73
XKS1	YGR194C	GSH2	Q08220	491 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	YNG1	Q08465	219 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	ACF2	Q12168	779 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	MDM32	Q12171	622 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	PST2	Q12335	198 aa	Known RBP	4.22	□□□□□ -1.73
XKS1	YGR194C	RPN6	Q12377	434 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	LSO2	Q3E772	92 aa	Known RBP	4.22	□□□□□ -1.73
XKS1	YGR194C	MHF2	Q3E829	80 aa		4.22	□□□□□ -1.73
XKS1	YGR194C	PRC1	P00729	532 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	HEM2	P05373	342 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	APE1	P14904	514 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	GRR1	P24814	1151 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	BET3	P36149	193 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	RSP5	P39940	809 aa	Known RBP	4.21	□□□□□ -1.74
XKS1	YGR194C	ATM1	P40416	690 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	YKE4	P40544	346 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	GYP8	P43570	497 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	NNF1	P47149	201 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	MTR3	P48240	250 aa	Predicted RBP	4.21	□□□□□ -1.74
XKS1	YGR194C	BPL1	P48445	690 aa	Predicted RBP	4.21	□□□□□ -1.74
XKS1	YGR194C	EFM5	P53200	248 aa	Known RBP	4.21	□□□□□ -1.74
XKS1	YGR194C	SLI1	P53304	468 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	YAT1	P80235	687 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	REG1	Q00816	1014 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	KIN4	Q01919	800 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	RLI1	Q03195	608 aa	Known RBP	4.21	□□□□□ -1.74
XKS1	YGR194C	PFA5	Q03289	374 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	SKY1	Q03656	742 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	ENT5	Q03769	411 aa	Known RBP	4.21	□□□□□ -1.74
XKS1	YGR194C	RPN9	Q04062	393 aa	Known RBP	4.21	□□□□□ -1.74
XKS1	YGR194C	SEG1	Q04279	960 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	RCO1	Q04779	684 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	PDR8	Q06149	701 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	UAF30	Q08747	228 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	FEX1	Q08913	375 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	YLR049C	Q12110	428 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	RIB3	Q99258	208 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	CAN1	P04817	590 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	STE3	P06783	470 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	GLN4	P13188	809 aa	Known RBP	4.21	□□□□□ -1.74
XKS1	YGR194C	KIN3	P22209	435 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	TRX2	P22803	104 aa	Known RBP	4.21	□□□□□ -1.74
XKS1	YGR194C	SAT4	P25333	603 aa	Known RBP	4.21	□□□□□ -1.74
XKS1	YGR194C	YCL049C	P25577	312 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	RNP1	P32385	249 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	DPH2	P32461	534 aa		4.21	□□□□□ -1.74
XKS1	YGR194C	PTM1	P32857	523 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms