RNA–Protein interactions for RNA: YGR081C

SLX9, Transcript of Protein required for pre-rRNA processing, yeastyeast

Gene SLX9, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX9YGR081C CKA1P15790 372 aa2.66□□□□□ -1.98
SLX9YGR081C RVS161P25343 265 aaKnown RBP2.66□□□□□ -1.98
SLX9YGR081C OTU2P38747 307 aaKnown RBP2.66□□□□□ -1.98
SLX9YGR081C ESL1P40456 1118 aa2.66□□□□□ -1.98
SLX9YGR081C SAS2P40963 338 aa2.66□□□□□ -1.98
SLX9YGR081C YMR181CQ03231 154 aa2.66□□□□□ -1.98
SLX9YGR081C PPM1Q04081 328 aa2.66□□□□□ -1.98
SLX9YGR081C SGT1Q08446 395 aa2.66□□□□□ -1.98
SLX9YGR081C BUD21Q08492 214 aaPredicted RBP2.66□□□□□ -1.98
SLX9YGR081C RTP1Q12751 981 aa2.66□□□□□ -1.98
SLX9YGR081C VPS15P22219 1454 aa2.65□□□□□ -1.98
SLX9YGR081C CHD1P32657 1468 aa2.65□□□□□ -1.98
SLX9YGR081C RFC3P38629 340 aa2.65□□□□□ -1.99
SLX9YGR081C YHR054CP38780 354 aa2.65□□□□□ -1.99
SLX9YGR081C MTM1P53320 366 aa2.65□□□□□ -1.99
SLX9YGR081C FRE4P53746 719 aa2.65□□□□□ -1.99
SLX9YGR081C SIL1Q08199 421 aa2.65□□□□□ -1.99
SLX9YGR081C YPR117WQ06116 2489 aa2.64□□□□□ -1.99
SLX9YGR081C ILV5P06168 395 aaKnown RBP2.64□□□□□ -1.99
SLX9YGR081C NFT1P0CE68 1218 aa2.64□□□□□ -1.99
SLX9YGR081C SLY1P22213 666 aa2.64□□□□□ -1.99
SLX9YGR081C SIN4P32259 974 aa2.64□□□□□ -1.99
SLX9YGR081C PRS1P32895 427 aaKnown RBP2.64□□□□□ -1.99
SLX9YGR081C KKQ8P36004 724 aa2.64□□□□□ -1.99
SLX9YGR081C VHC1P38329 1120 aa2.64□□□□□ -1.99
SLX9YGR081C LYS1P38998 373 aaRIP-Chip data2.64□□□□□ -1.99not detected
SLX9YGR081C DLD2P46681 530 aaKnown RBP2.64□□□□□ -1.99
SLX9YGR081C YIF1P53845 314 aaKnown RBP2.64□□□□□ -1.99
SLX9YGR081C MDM30Q05930 598 aa2.64□□□□□ -1.99
SLX9YGR081C VTA1Q06263 330 aa2.64□□□□□ -1.99
SLX9YGR081C SNX3Q08826 162 aaKnown RBP2.64□□□□□ -1.99
SLX9YGR081C ORT1Q12375 292 aa2.64□□□□□ -1.99
SLX9YGR081C RTN2Q12443 393 aa2.64□□□□□ -1.99
SLX9YGR081C RMD5Q12508 421 aa2.64□□□□□ -1.99
SLX9YGR081C PGA3Q12746 312 aaKnown RBP2.64□□□□□ -1.99
SLX9YGR081C YOL159C-AQ3E769 90 aa2.64□□□□□ -1.99
SLX9YGR081C TEF1P02994 458 aaKnown RBP2.63□□□□□ -1.99
SLX9YGR081C ARG4P04076 463 aaPredicted RBP2.63□□□□□ -1.99
SLX9YGR081C CYC3P06182 269 aa2.63□□□□□ -1.99
SLX9YGR081C SNT1P25357 1226 aa2.63□□□□□ -1.99
SLX9YGR081C LSB5P25369 354 aa2.63□□□□□ -1.99
SLX9YGR081C ERG3P32353 365 aa2.63□□□□□ -1.99
SLX9YGR081C KAR9P32526 644 aa2.63□□□□□ -1.99
SLX9YGR081C MNS1P32906 549 aa2.63□□□□□ -1.99
SLX9YGR081C NDE1P40215 560 aa2.63□□□□□ -1.99
SLX9YGR081C SSU1P41930 458 aa2.63□□□□□ -1.99
SLX9YGR081C MNP1P53163 194 aaPredicted RBP2.63□□□□□ -1.99
SLX9YGR081C SHY1P53266 389 aa2.63□□□□□ -1.99
SLX9YGR081C CWC25P53854 179 aaKnown RBP2.63□□□□□ -1.99
SLX9YGR081C MRPL19P53875 158 aa2.63□□□□□ -1.99
SLX9YGR081C RSN1Q03516 953 aa2.63□□□□□ -1.99
SLX9YGR081C TSA2Q04120 196 aa2.63□□□□□ -1.99
SLX9YGR081C TAF11Q04226 346 aa2.63□□□□□ -1.99
SLX9YGR081C YMR027WQ04371 470 aa2.63□□□□□ -1.99
SLX9YGR081C ATG2P53855 1592 aa2.62□□□□□ -1.99
SLX9YGR081C TRM732Q03496 1420 aa2.62□□□□□ -1.99
SLX9YGR081C NAT1P12945 854 aaKnown RBP2.62□□□□□ -1.99
SLX9YGR081C CTR86P25355 563 aa2.62□□□□□ -1.99
SLX9YGR081C GEX1P25596 615 aa2.62□□□□□ -1.99
SLX9YGR081C KRE2P27809 442 aa2.62□□□□□ -1.99
SLX9YGR081C MUD1P32605 298 aaKnown RBP2.62□□□□□ -1.99
SLX9YGR081C RML2P32611 393 aa2.62□□□□□ -1.99
SLX9YGR081C SAS3P34218 831 aa2.62□□□□□ -1.99
SLX9YGR081C ARA1P38115 344 aa2.62□□□□□ -1.99
SLX9YGR081C YJR011CP47086 261 aaPredicted RBP2.62□□□□□ -1.99
SLX9YGR081C HMS2P47175 358 aa2.62□□□□□ -1.99
SLX9YGR081C WTM1Q12363 437 aaKnown RBP2.62□□□□□ -1.99
SLX9YGR081C RED1P14291 827 aa2.61□□□□□ -1.99
SLX9YGR081C POP5P28005 173 aa2.61□□□□□ -1.99
SLX9YGR081C BEM1P29366 551 aa2.61□□□□□ -1.99
SLX9YGR081C FMS1P50264 508 aa2.61□□□□□ -1.99
SLX9YGR081C RKM1Q08961 583 aaPredicted RBP2.61□□□□□ -1.99
SLX9YGR081C TOP1P04786 769 aa2.6□□□□□ -1.99
SLX9YGR081C RAD57P25301 460 aa2.6□□□□□ -1.99
SLX9YGR081C HCS1P34243 683 aa2.6□□□□□ -1.99
SLX9YGR081C APE3P37302 537 aaKnown RBP2.6□□□□□ -1.99
SLX9YGR081C BRO1P48582 844 aa2.6□□□□□ -1.99
SLX9YGR081C AZR1P50080 613 aa2.6□□□□□ -1.99
SLX9YGR081C GPI15P53961 229 aa2.6□□□□□ -1.99
SLX9YGR081C PEX25Q02969 394 aa2.6□□□□□ -1.99
SLX9YGR081C BET5Q03630 159 aa2.6□□□□□ -1.99
SLX9YGR081C SKI7Q08491 747 aaPredicted RBP2.6□□□□□ -1.99
SLX9YGR081C VAM3Q12241 283 aa2.6□□□□□ -1.99
SLX9YGR081C SKI3P17883 1432 aaKnown RBP2.59□□□□□ -1.99
SLX9YGR081C SCC2Q04002 1493 aa2.59□□□□□ -1.99
SLX9YGR081C SPO12P17123 173 aa2.59□□□□□ -1.99
SLX9YGR081C PCL1P24867 279 aa2.59□□□□□ -1.99
SLX9YGR081C CLB3P24870 427 aa2.59□□□□□ -1.99
SLX9YGR081C RHB1P25378 209 aa2.59□□□□□ -1.99
SLX9YGR081C SOR1P35497 357 aaKnown RBP2.59□□□□□ -1.99
SLX9YGR081C JLP2P40206 208 aa2.59□□□□□ -1.99
SLX9YGR081C RPS0BP46654 252 aaKnown RBP2.59□□□□□ -1.99
SLX9YGR081C MDG1P53885 366 aa2.59□□□□□ -1.99
SLX9YGR081C TAF12Q03761 539 aa2.59□□□□□ -1.99
SLX9YGR081C ARX1Q03862 593 aaKnown RBP2.59□□□□□ -1.99
SLX9YGR081C RRP45Q05636 305 aaKnown RBP2.59□□□□□ -1.99
SLX9YGR081C SOR2Q07786 357 aa2.59□□□□□ -1.99
SLX9YGR081C REX4Q08237 289 aa2.59□□□□□ -1.99
SLX9YGR081C SCEIP03882 235 aa2.58□□□□□ -2
SLX9YGR081C CLC1P17891 233 aa2.58□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms