RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W BNA2P47125 453 aa6.1□□□□□ -1.43
MSP1YGR028W MDM34P53083 459 aa6.1□□□□□ -1.43
MSP1YGR028W YNL260CP53846 198 aa6.1□□□□□ -1.43
MSP1YGR028W SED5Q01590 340 aa6.1□□□□□ -1.43
MSP1YGR028W RNT1Q02555 471 aa6.1□□□□□ -1.43
MSP1YGR028W NHP10Q03435 203 aa6.1□□□□□ -1.43
MSP1YGR028W RSF1Q05043 376 aa6.1□□□□□ -1.43
MSP1YGR028W NTG2Q08214 380 aa6.1□□□□□ -1.43
MSP1YGR028W YPR022CQ12139 1133 aa6.1□□□□□ -1.43
MSP1YGR028W LEU9Q12166 604 aaKnown RBP6.1□□□□□ -1.43
MSP1YGR028W YPL247CQ12523 523 aa6.1□□□□□ -1.43
MSP1YGR028W STE3P06783 470 aa6.09□□□□□ -1.43
MSP1YGR028W PET111P08468 800 aa6.09□□□□□ -1.43
MSP1YGR028W RPS21AP0C0V8 87 aaKnown RBP6.09□□□□□ -1.43
MSP1YGR028W GUK1P15454 187 aaKnown RBP6.09□□□□□ -1.43
MSP1YGR028W PRP4P20053 465 aaKnown RBP6.09□□□□□ -1.43
MSP1YGR028W RPO26P20435 155 aa6.09□□□□□ -1.43
MSP1YGR028W AMD2P22580 549 aa6.09□□□□□ -1.43
MSP1YGR028W MRPL25P23369 157 aa6.09□□□□□ -1.43
MSP1YGR028W YKL100CP34248 587 aa6.09□□□□□ -1.43
MSP1YGR028W MRPL15P36523 253 aa6.09□□□□□ -1.43
MSP1YGR028W APT2P36973 181 aa6.09□□□□□ -1.43
MSP1YGR028W CTP1P38152 299 aa6.09□□□□□ -1.43
MSP1YGR028W SMX2P40204 77 aaKnown RBP6.09□□□□□ -1.43
MSP1YGR028W SEC28P40509 296 aaKnown RBP6.09□□□□□ -1.43
MSP1YGR028W IKS1P47042 667 aa6.09□□□□□ -1.43
MSP1YGR028W PRP31P49704 494 aaPredicted RBP6.09□□□□□ -1.43
MSP1YGR028W PRO2P54885 456 aaKnown RBP6.09□□□□□ -1.43
MSP1YGR028W PEX25Q02969 394 aa6.09□□□□□ -1.43
MSP1YGR028W NRG1Q03125 231 aa6.09□□□□□ -1.43
MSP1YGR028W YMR155WQ03795 547 aa6.09□□□□□ -1.43
MSP1YGR028W ROY1Q04847 553 aa6.09□□□□□ -1.43
MSP1YGR028W CRR1Q05790 422 aa6.09□□□□□ -1.43
MSP1YGR028W RAD34Q06665 692 aa6.09□□□□□ -1.43
MSP1YGR028W IRC13Q08630 104 aa6.09□□□□□ -1.43
MSP1YGR028W APC9Q12107 265 aa6.09□□□□□ -1.43
MSP1YGR028W MEC1P38111 2368 aa6.09□□□□□ -1.43
MSP1YGR028W TRA1P38811 3744 aa6.09□□□□□ -1.44
MSP1YGR028W ARG4P04076 463 aaPredicted RBP6.08□□□□□ -1.44
MSP1YGR028W URA4P20051 364 aa6.08□□□□□ -1.44
MSP1YGR028W PRP2P20095 876 aaPredicted RBP6.08□□□□□ -1.44
MSP1YGR028W MEF1P25039 761 aa6.08□□□□□ -1.44
MSP1YGR028W LDB16P25587 256 aa6.08□□□□□ -1.44
MSP1YGR028W HXT4P32467 576 aa6.08□□□□□ -1.44
MSP1YGR028W PTH2P34222 208 aa6.08□□□□□ -1.44
MSP1YGR028W PHO89P38361 574 aa6.08□□□□□ -1.44
MSP1YGR028W SIC1P38634 284 aa6.08□□□□□ -1.44
MSP1YGR028W SPC97P38863 823 aa6.08□□□□□ -1.44
MSP1YGR028W GGC1P38988 300 aa6.08□□□□□ -1.44
MSP1YGR028W HXT6P39003 570 aaKnown RBP6.08□□□□□ -1.44
MSP1YGR028W HXT7P39004 570 aa6.08□□□□□ -1.44
MSP1YGR028W PTI1P39927 425 aaPredicted RBP6.08□□□□□ -1.44
MSP1YGR028W EMP65P40085 556 aa6.08□□□□□ -1.44
MSP1YGR028W CAB2P40506 365 aa6.08□□□□□ -1.44
MSP1YGR028W PRM2P40534 656 aa6.08□□□□□ -1.44
MSP1YGR028W VMA13P41807 478 aaKnown RBP6.08□□□□□ -1.44
MSP1YGR028W SEC27P41811 889 aaKnown RBP6.08□□□□□ -1.44
MSP1YGR028W GCD14P46959 383 aaPredicted RBP6.08□□□□□ -1.44
MSP1YGR028W URB2P47108 1174 aa6.08□□□□□ -1.44
MSP1YGR028W ASK10P48361 1146 aa6.08□□□□□ -1.44
MSP1YGR028W AIF1P52923 378 aa6.08□□□□□ -1.44
MSP1YGR028W YGL260WP53056 76 aa6.08□□□□□ -1.44
MSP1YGR028W SHY1P53266 389 aa6.08□□□□□ -1.44
MSP1YGR028W SUR7P54003 302 aa6.08□□□□□ -1.44
MSP1YGR028W MRS2Q01926 470 aa6.08□□□□□ -1.44
MSP1YGR028W RMI1Q02685 241 aa6.08□□□□□ -1.44
MSP1YGR028W YDR338CQ05497 695 aa6.08□□□□□ -1.44
MSP1YGR028W VID22Q05934 901 aa6.08□□□□□ -1.44
MSP1YGR028W TEN1Q07921 160 aa6.08□□□□□ -1.44
MSP1YGR028W YPL245WQ12179 454 aaKnown RBP6.08□□□□□ -1.44
MSP1YGR028W MSL5Q12186 476 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
MSP1YGR028W RRP42Q12277 265 aaPredicted RBP6.08□□□□□ -1.44
MSP1YGR028W ILV2P07342 687 aaKnown RBP6.07□□□□□ -1.44
MSP1YGR028W ART10P18634 518 aaKnown RBP6.07□□□□□ -1.44
MSP1YGR028W MXR2P25566 168 aa6.07□□□□□ -1.44
MSP1YGR028W ADE1P27616 306 aa6.07□□□□□ -1.44
MSP1YGR028W PHA2P32452 334 aa6.07□□□□□ -1.44
MSP1YGR028W NIP1P32497 812 aaKnown RBP6.07□□□□□ -1.44
MSP1YGR028W YME1P32795 747 aa6.07□□□□□ -1.44
MSP1YGR028W SEF1P34228 1148 aa6.07□□□□□ -1.44
MSP1YGR028W KKQ8P36004 724 aa6.07□□□□□ -1.44
MSP1YGR028W CAB3P36076 571 aa6.07□□□□□ -1.44
MSP1YGR028W CBP4P37267 147 aa6.07□□□□□ -1.44
MSP1YGR028W CHS7P38843 316 aa6.07□□□□□ -1.44
MSP1YGR028W ECM1P39715 212 aa6.07□□□□□ -1.44
MSP1YGR028W FKH2P41813 862 aa6.07□□□□□ -1.44
MSP1YGR028W YJR039WP47107 1121 aa6.07□□□□□ -1.44
MSP1YGR028W JHD2P47156 728 aaPredicted RBP6.07□□□□□ -1.44
MSP1YGR028W EFM5P53200 248 aaKnown RBP6.07□□□□□ -1.44
MSP1YGR028W IBD2P53892 351 aa6.07□□□□□ -1.44
MSP1YGR028W TAF11Q04226 346 aa6.07□□□□□ -1.44
MSP1YGR028W YLR040CQ07988 224 aa6.07□□□□□ -1.44
MSP1YGR028W MMT2Q08970 484 aa6.07□□□□□ -1.44
MSP1YGR028W YLR053CQ12026 108 aa6.07□□□□□ -1.44
MSP1YGR028W HEM2P05373 342 aa6.06□□□□□ -1.44
MSP1YGR028W CHA1P25379 360 aaKnown RBP6.06□□□□□ -1.44
MSP1YGR028W YCR090CP25654 182 aaKnown RBP6.06□□□□□ -1.44
MSP1YGR028W CRM1P30822 1084 aaKnown RBP6.06□□□□□ -1.44
MSP1YGR028W REV7P38927 245 aa6.06□□□□□ -1.44
MSP1YGR028W MNT3P40549 630 aa6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms