RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C APE2P32454 952 aaKnown RBP3.86□□□□□ -1.79
SPB4YFL002C RGT1P32862 1170 aa3.86□□□□□ -1.79
SPB4YFL002C HOT13P36078 116 aa3.86□□□□□ -1.79
SPB4YFL002C STP2P38704 541 aa3.86□□□□□ -1.79
SPB4YFL002C SPT8P38915 602 aa3.86□□□□□ -1.79
SPB4YFL002C VRG4P40107 337 aa3.86□□□□□ -1.79
SPB4YFL002C AIM20P40451 204 aa3.86□□□□□ -1.79
SPB4YFL002C STD1Q02794 444 aa3.86□□□□□ -1.79
SPB4YFL002C LGE1Q02796 332 aaKnown RBP3.86□□□□□ -1.79
SPB4YFL002C GIP3Q03016 1276 aa3.86□□□□□ -1.79
SPB4YFL002C SLD5Q03406 294 aa3.86□□□□□ -1.79
SPB4YFL002C URH1Q04179 340 aa3.86□□□□□ -1.79
SPB4YFL002C IVY1Q04934 453 aa3.86□□□□□ -1.79
SPB4YFL002C SNT309Q06091 175 aaPredicted RBP3.86□□□□□ -1.79
SPB4YFL002C IRC10Q08118 586 aa3.86□□□□□ -1.79
SPB4YFL002C RKM5Q12367 367 aa3.86□□□□□ -1.79
SPB4YFL002C HIS4P00815 799 aaKnown RBP3.85□□□□□ -1.79
SPB4YFL002C RAD57P25301 460 aa3.85□□□□□ -1.79
SPB4YFL002C CTR86P25355 563 aa3.85□□□□□ -1.79
SPB4YFL002C COQ3P27680 312 aa3.85□□□□□ -1.79
SPB4YFL002C YUH1P35127 236 aa3.85□□□□□ -1.79
SPB4YFL002C YHR177WP38867 453 aa3.85□□□□□ -1.79
SPB4YFL002C YAL037WP39728 267 aa3.85□□□□□ -1.79
SPB4YFL002C SLI1P53304 468 aa3.85□□□□□ -1.79
SPB4YFL002C YMR310CQ04867 317 aaPredicted RBP3.85□□□□□ -1.79
SPB4YFL002C GLO2Q05584 274 aa3.85□□□□□ -1.79
SPB4YFL002C PEX27Q08580 376 aa3.85□□□□□ -1.79
SPB4YFL002C YLL056CQ12177 298 aa3.85□□□□□ -1.79
SPB4YFL002C RNH203Q12338 110 aa3.85□□□□□ -1.79
SPB4YFL002C MRPL23Q12487 163 aaPredicted RBP3.85□□□□□ -1.79
SPB4YFL002C RMD5Q12508 421 aa3.85□□□□□ -1.79
SPB4YFL002C YPT1P01123 206 aaKnown RBP3.84□□□□□ -1.79
SPB4YFL002C GAL4P04386 881 aa3.84□□□□□ -1.79
SPB4YFL002C MAS1P10507 462 aa3.84□□□□□ -1.79
SPB4YFL002C HMX1P32339 317 aa3.84□□□□□ -1.79
SPB4YFL002C END3P39013 349 aa3.84□□□□□ -1.79
SPB4YFL002C YER079WP40052 210 aaKnown RBP3.84□□□□□ -1.79
SPB4YFL002C GCD10P41814 478 aa3.84□□□□□ -1.79
SPB4YFL002C VPS25P47142 202 aa3.84□□□□□ -1.79
SPB4YFL002C PNC1P53184 216 aaKnown RBP3.84□□□□□ -1.79
SPB4YFL002C ATP23P53722 227 aa3.84□□□□□ -1.79
SPB4YFL002C YMR087WQ04299 284 aa3.84□□□□□ -1.79
SPB4YFL002C URC2Q04411 772 aa3.84□□□□□ -1.79
SPB4YFL002C AAD15Q08361 143 aa3.84□□□□□ -1.79
SPB4YFL002C ATG34Q12292 412 aa3.84□□□□□ -1.79
SPB4YFL002C ARP6Q12509 438 aa3.84□□□□□ -1.79
SPB4YFL002C URE2P23202 354 aaKnown RBP3.84□□□□□ -1.8
SPB4YFL002C GID7P25569 745 aa3.84□□□□□ -1.8
SPB4YFL002C PHD1P36093 366 aa3.84□□□□□ -1.8
SPB4YFL002C TIF5P38431 405 aaKnown RBP3.84□□□□□ -1.8
SPB4YFL002C TOM71P38825 639 aaKnown RBP3.84□□□□□ -1.8
SPB4YFL002C YHR122WP38829 231 aa3.84□□□□□ -1.8
SPB4YFL002C SPG5P42933 373 aa3.84□□□□□ -1.8
SPB4YFL002C SCD6P45978 349 aaKnown RBP RIP-Chip data3.84□□□□□ -1.8not detected
SPB4YFL002C BNA3P47039 444 aaKnown RBP3.84□□□□□ -1.8
SPB4YFL002C YHC3P47040 408 aa3.84□□□□□ -1.8
SPB4YFL002C NUP84P52891 726 aa3.84□□□□□ -1.8
SPB4YFL002C PCP1P53259 346 aa3.84□□□□□ -1.8
SPB4YFL002C YGR266WP53326 701 aa3.84□□□□□ -1.8
SPB4YFL002C NUP53Q03790 475 aa3.84□□□□□ -1.8
SPB4YFL002C ECM7Q06200 448 aa3.84□□□□□ -1.8
SPB4YFL002C YPR078CQ06813 372 aa3.84□□□□□ -1.8
SPB4YFL002C DST1P07273 309 aa3.83□□□□□ -1.8
SPB4YFL002C IMA3P0CW40 589 aa3.83□□□□□ -1.8
SPB4YFL002C IMA4P0CW41 589 aa3.83□□□□□ -1.8
SPB4YFL002C RPL12AP0CX53 165 aaKnown RBP3.83□□□□□ -1.8
SPB4YFL002C RPL12BP0CX54 165 aa3.83□□□□□ -1.8
SPB4YFL002C SEC62P21825 274 aa3.83□□□□□ -1.8
SPB4YFL002C HXT2P23585 541 aa3.83□□□□□ -1.8
SPB4YFL002C ADY2P25613 283 aa3.83□□□□□ -1.8
SPB4YFL002C SPT10P35208 640 aa3.83□□□□□ -1.8
SPB4YFL002C ERG7P38604 731 aa3.83□□□□□ -1.8
SPB4YFL002C CSM2P40465 213 aa3.83□□□□□ -1.8
SPB4YFL002C AGX1P43567 385 aa3.83□□□□□ -1.8
SPB4YFL002C YGL114WP53134 725 aa3.83□□□□□ -1.8
SPB4YFL002C GPI15P53961 229 aa3.83□□□□□ -1.8
SPB4YFL002C RRT8Q08219 342 aa3.83□□□□□ -1.8
SPB4YFL002C REX4Q08237 289 aa3.83□□□□□ -1.8
SPB4YFL002C IMA2Q08295 589 aa3.83□□□□□ -1.8
SPB4YFL002C SGT2Q12118 346 aaKnown RBP3.83□□□□□ -1.8
SPB4YFL002C LSP1Q12230 341 aaKnown RBP3.83□□□□□ -1.8
SPB4YFL002C PKH2Q12236 1081 aaKnown RBP3.83□□□□□ -1.8
SPB4YFL002C FRE7Q12333 620 aa3.83□□□□□ -1.8
SPB4YFL002C HOM2P13663 365 aaKnown RBP3.82□□□□□ -1.8
SPB4YFL002C UGA1P17649 471 aa3.82□□□□□ -1.8
SPB4YFL002C YPK3P38070 525 aa3.82□□□□□ -1.8
SPB4YFL002C SWC5P38326 303 aa3.82□□□□□ -1.8
SPB4YFL002C OSH3P38713 996 aaKnown RBP3.82□□□□□ -1.8
SPB4YFL002C ALP1P38971 573 aa3.82□□□□□ -1.8
SPB4YFL002C SEC27P41811 889 aaKnown RBP3.82□□□□□ -1.8
SPB4YFL002C YNL234WP53857 426 aa3.82□□□□□ -1.8
SPB4YFL002C YNL146WP53906 100 aa3.82□□□□□ -1.8
SPB4YFL002C SAM50P53969 484 aa3.82□□□□□ -1.8
SPB4YFL002C IDP3P53982 420 aaKnown RBP3.82□□□□□ -1.8
SPB4YFL002C SPO19Q03029 223 aa3.82□□□□□ -1.8
SPB4YFL002C CAB5Q03941 241 aa3.82□□□□□ -1.8
SPB4YFL002C BNA5Q05979 453 aa3.82□□□□□ -1.8
SPB4YFL002C THI20Q08224 551 aa3.82□□□□□ -1.8
SPB4YFL002C YLR112WQ12130 139 aa3.82□□□□□ -1.8
SPB4YFL002C STE2D6VTK4 431 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms