RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	ATG23	Q06671	453 aa		4.12	□□□□□ -1.75
UBC8	YEL012W	PLB3	Q08108	686 aa		4.12	□□□□□ -1.75
UBC8	YEL012W	CIR2	Q08822	631 aa		4.12	□□□□□ -1.75
UBC8	YEL012W	COX1	P00401	534 aa		4.11	□□□□□ -1.75
UBC8	YEL012W	RAD10	P06838	210 aa		4.11	□□□□□ -1.75
UBC8	YEL012W	SPO16	P17122	198 aa		4.11	□□□□□ -1.75
UBC8	YEL012W	SPO12	P17123	173 aa		4.11	□□□□□ -1.75
UBC8	YEL012W	AAD3	P25612	363 aa		4.11	□□□□□ -1.75
UBC8	YEL012W	CDC13	P32797	924 aa	Known RBP	4.11	□□□□□ -1.75
UBC8	YEL012W	UGP1	P32861	499 aa	Known RBP	4.11	□□□□□ -1.75
UBC8	YEL012W	MTG2	P38860	518 aa		4.11	□□□□□ -1.75
UBC8	YEL012W	LYS1	P38998	373 aa	RIP-Chip data	4.11	□□□□□ -1.75	not detected
UBC8	YEL012W	YMR124W	P39523	943 aa	Known RBP	4.11	□□□□□ -1.75
UBC8	YEL012W	LAS21	P40367	830 aa		4.11	□□□□□ -1.75
UBC8	YEL012W	SSU1	P41930	458 aa		4.11	□□□□□ -1.75
UBC8	YEL012W	BUD13	P46947	266 aa	Predicted RBP	4.11	□□□□□ -1.75
UBC8	YEL012W	BIR1	P47134	954 aa		4.11	□□□□□ -1.75
UBC8	YEL012W	MRK1	P50873	501 aa		4.11	□□□□□ -1.75
UBC8	YEL012W	COG2	P53271	262 aa		4.11	□□□□□ -1.75
UBC8	YEL012W	ENT5	Q03769	411 aa	Known RBP	4.11	□□□□□ -1.75
UBC8	YEL012W	YMR160W	Q03823	816 aa		4.11	□□□□□ -1.75
UBC8	YEL012W	YLR287C	Q05881	355 aa		4.11	□□□□□ -1.75
UBC8	YEL012W	DIC1	Q06143	298 aa		4.11	□□□□□ -1.75
UBC8	YEL012W	RAD34	Q06665	692 aa		4.11	□□□□□ -1.75
UBC8	YEL012W	YPL272C	Q08984	517 aa		4.11	□□□□□ -1.75
UBC8	YEL012W	ULA1	Q12059	462 aa		4.11	□□□□□ -1.75
UBC8	YEL012W	SWT1	Q12104	458 aa		4.11	□□□□□ -1.75
UBC8	YEL012W	AI5_ALPHA	Q9ZZX1	630 aa		4.11	□□□□□ -1.75
UBC8	YEL012W	YLR302C	O13544	120 aa		4.1	□□□□□ -1.75
UBC8	YEL012W	SEM1	O94742	89 aa		4.1	□□□□□ -1.75
UBC8	YEL012W	ILS1	P09436	1072 aa	Known RBP	4.1	□□□□□ -1.75
UBC8	YEL012W	AQY1	P0CD91	305 aa		4.1	□□□□□ -1.75
UBC8	YEL012W	YSR3	P23501	404 aa		4.1	□□□□□ -1.75
UBC8	YEL012W	LDB16	P25587	256 aa		4.1	□□□□□ -1.75
UBC8	YEL012W	RPN12	P32496	274 aa		4.1	□□□□□ -1.75
UBC8	YEL012W	SPS19	P32573	292 aa	Known RBP	4.1	□□□□□ -1.75
UBC8	YEL012W	SKN1	P33336	771 aa		4.1	□□□□□ -1.75
UBC8	YEL012W	RPF2	P36160	344 aa	Known RBP	4.1	□□□□□ -1.75
UBC8	YEL012W	VBA2	P38358	474 aa	Known RBP	4.1	□□□□□ -1.75
UBC8	YEL012W	GND1	P38720	489 aa	Known RBP	4.1	□□□□□ -1.75
UBC8	YEL012W	CCT6	P39079	546 aa		4.1	□□□□□ -1.75
UBC8	YEL012W	LSM5	P40089	93 aa	Known RBP	4.1	□□□□□ -1.75
UBC8	YEL012W	FAU1	P40099	211 aa		4.1	□□□□□ -1.75
UBC8	YEL012W	UBX6	P47049	396 aa		4.1	□□□□□ -1.75
UBC8	YEL012W	BRO1	P48582	844 aa		4.1	□□□□□ -1.75
UBC8	YEL012W	INN1	P53901	409 aa		4.1	□□□□□ -1.75
UBC8	YEL012W	PLM2	Q04383	521 aa		4.1	□□□□□ -1.75
UBC8	YEL012W	CYK3	Q07533	885 aa		4.1	□□□□□ -1.75
UBC8	YEL012W	LDB18	Q07887	179 aa		4.1	□□□□□ -1.75
UBC8	YEL012W	BAG7	Q12128	409 aa		4.1	□□□□□ -1.75
UBC8	YEL012W	AHA1	Q12449	350 aa	Known RBP	4.1	□□□□□ -1.75
UBC8	YEL012W	SIN4	P32259	974 aa		4.09	□□□□□ -1.75
UBC8	YEL012W	DBF4	P32325	704 aa		4.09	□□□□□ -1.75
UBC8	YEL012W	SIP1	P32578	815 aa		4.09	□□□□□ -1.75
UBC8	YEL012W	SRB5	P32585	307 aa		4.09	□□□□□ -1.75
UBC8	YEL012W	KES1	P35844	434 aa	Known RBP	4.09	□□□□□ -1.75
UBC8	YEL012W	YHR182W	P38870	785 aa		4.09	□□□□□ -1.75
UBC8	YEL012W	PAC2	P39937	518 aa		4.09	□□□□□ -1.75
UBC8	YEL012W	RPH1	P39956	796 aa		4.09	□□□□□ -1.75
UBC8	YEL012W	YEL073C	P39974	107 aa		4.09	□□□□□ -1.75
UBC8	YEL012W	YAT2	P40017	923 aa		4.09	□□□□□ -1.75
UBC8	YEL012W	PHM8	P40025	321 aa		4.09	□□□□□ -1.75
UBC8	YEL012W	SAE2	P46946	345 aa		4.09	□□□□□ -1.75
UBC8	YEL012W	YNL247W	P53852	767 aa	Known RBP	4.09	□□□□□ -1.75
UBC8	YEL012W	YSA1	Q01976	231 aa		4.09	□□□□□ -1.75
UBC8	YEL012W	NUP100	Q02629	959 aa		4.09	□□□□□ -1.75
UBC8	YEL012W	ENT4	Q07872	247 aa		4.09	□□□□□ -1.75
UBC8	YEL012W	ETT1	Q08421	412 aa	Known RBP	4.09	□□□□□ -1.75
UBC8	YEL012W	YPL191C	Q08930	360 aa		4.09	□□□□□ -1.75
UBC8	YEL012W	RRP12	Q12754	1228 aa	Known RBP	4.09	□□□□□ -1.75
UBC8	YEL012W	RPN13	O13563	156 aa		4.08	□□□□□ -1.76
UBC8	YEL012W	CPA1	P07258	411 aa	Known RBP	4.08	□□□□□ -1.76
UBC8	YEL012W	ERG11	P10614	530 aa		4.08	□□□□□ -1.76
UBC8	YEL012W	SLY1	P22213	666 aa		4.08	□□□□□ -1.76
UBC8	YEL012W	LAC1	P28496	418 aa		4.08	□□□□□ -1.76
UBC8	YEL012W	TAF14	P35189	244 aa		4.08	□□□□□ -1.76
UBC8	YEL012W	MRPL37	P36532	105 aa		4.08	□□□□□ -1.76
UBC8	YEL012W	RRT2	P38332	387 aa		4.08	□□□□□ -1.76
UBC8	YEL012W	HIS2	P38635	335 aa		4.08	□□□□□ -1.76
UBC8	YEL012W	DBP8	P38719	431 aa		4.08	□□□□□ -1.76
UBC8	YEL012W	YHR210C	P38893	341 aa		4.08	□□□□□ -1.76
UBC8	YEL012W	PFK26	P40433	827 aa	Known RBP	4.08	□□□□□ -1.76
UBC8	YEL012W	YIL166C	P40445	542 aa		4.08	□□□□□ -1.76
UBC8	YEL012W	SWP82	P43554	623 aa		4.08	□□□□□ -1.76
UBC8	YEL012W	YFR018C	P43599	363 aa		4.08	□□□□□ -1.76
UBC8	YEL012W	ARC1	P46672	376 aa	Known RBP	4.08	□□□□□ -1.76
UBC8	YEL012W	BSC5	P53755	489 aa		4.08	□□□□□ -1.76
UBC8	YEL012W	CDC14	Q00684	551 aa		4.08	□□□□□ -1.76
UBC8	YEL012W	PEX25	Q02969	394 aa		4.08	□□□□□ -1.76
UBC8	YEL012W	DIG1	Q03063	452 aa	Known RBP	4.08	□□□□□ -1.76
UBC8	YEL012W	THI7	Q05998	598 aa		4.08	□□□□□ -1.76
UBC8	YEL012W	AAD15	Q08361	143 aa		4.08	□□□□□ -1.76
UBC8	YEL012W	TMS1	Q12116	473 aa		4.08	□□□□□ -1.76
UBC8	YEL012W	LSP1	Q12230	341 aa	Known RBP	4.08	□□□□□ -1.76
UBC8	YEL012W	YOR019W	Q99248	730 aa		4.08	□□□□□ -1.76
UBC8	YEL012W	BCY1	P07278	416 aa	Known RBP	4.07	□□□□□ -1.76
UBC8	YEL012W	MET8	P15807	274 aa		4.07	□□□□□ -1.76
UBC8	YEL012W	GSH1	P32477	678 aa		4.07	□□□□□ -1.76
UBC8	YEL012W	FMP46	P36141	133 aa	Known RBP	4.07	□□□□□ -1.76
UBC8	YEL012W	STN1	P38960	494 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 87.3 ms