RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C RRN11Q04712 507 aa2.98□□□□□ -1.93
VAB2YEL005C SOR2Q07786 357 aa2.98□□□□□ -1.93
VAB2YEL005C HNT3Q08702 217 aa2.98□□□□□ -1.93
VAB2YEL005C BUG1Q12191 341 aa2.98□□□□□ -1.93
VAB2YEL005C ISN1Q99312 450 aa2.98□□□□□ -1.93
VAB2YEL005C HEM15P16622 393 aa2.97□□□□□ -1.93
VAB2YEL005C LSB5P25369 354 aa2.97□□□□□ -1.93
VAB2YEL005C DEG1P31115 442 aaKnown RBP2.97□□□□□ -1.93
VAB2YEL005C YHR218WP38899 603 aa2.97□□□□□ -1.93
VAB2YEL005C KRE9P39005 276 aa2.97□□□□□ -1.93
VAB2YEL005C PCF11P39081 626 aaPredicted RBP2.97□□□□□ -1.93
VAB2YEL005C BUD27P43573 796 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
VAB2YEL005C RRT5P43607 289 aa2.97□□□□□ -1.93
VAB2YEL005C NCA3P46955 337 aa2.97□□□□□ -1.93
VAB2YEL005C YGR111WP53265 400 aa2.97□□□□□ -1.93
VAB2YEL005C IMP4P53941 290 aaKnown RBP2.97□□□□□ -1.93
VAB2YEL005C OCA2P53949 197 aa2.97□□□□□ -1.93
VAB2YEL005C RSN1Q03516 953 aa2.97□□□□□ -1.93
VAB2YEL005C MMR1Q06324 491 aa2.97□□□□□ -1.93
VAB2YEL005C ESA1Q08649 445 aa2.97□□□□□ -1.93
VAB2YEL005C RKM1Q08961 583 aaPredicted RBP2.97□□□□□ -1.93
VAB2YEL005C RRP12Q12754 1228 aaKnown RBP2.97□□□□□ -1.93
VAB2YEL005C HHF1P02309 103 aaKnown RBP2.96□□□□□ -1.94
VAB2YEL005C SEC63P14906 663 aa2.96□□□□□ -1.94
VAB2YEL005C SPO12P17123 173 aa2.96□□□□□ -1.94
VAB2YEL005C SMY1P32364 656 aaKnown RBP2.96□□□□□ -1.94
VAB2YEL005C LOS1P33418 1100 aaPredicted RBP2.96□□□□□ -1.94
VAB2YEL005C YBL059WP34224 193 aa2.96□□□□□ -1.94
VAB2YEL005C KKQ8P36004 724 aa2.96□□□□□ -1.94
VAB2YEL005C NDT80P38830 627 aa2.96□□□□□ -1.94
VAB2YEL005C MTC6P38849 526 aa2.96□□□□□ -1.94
VAB2YEL005C OST1P41543 476 aaKnown RBP2.96□□□□□ -1.94
VAB2YEL005C PHO86P46956 311 aa2.96□□□□□ -1.94
VAB2YEL005C TCB2P48231 1178 aa2.96□□□□□ -1.94
VAB2YEL005C RPT4P53549 437 aaKnown RBP2.96□□□□□ -1.94
VAB2YEL005C YNR048WP53740 393 aa2.96□□□□□ -1.94
VAB2YEL005C ARK1P53974 638 aa2.96□□□□□ -1.94
VAB2YEL005C VPS9P54787 451 aa2.96□□□□□ -1.94
VAB2YEL005C TAF12Q03761 539 aa2.96□□□□□ -1.94
VAB2YEL005C SMA2Q04658 369 aa2.96□□□□□ -1.94
VAB2YEL005C YLR345WQ06137 509 aa2.96□□□□□ -1.94
VAB2YEL005C THP3Q12049 470 aaKnown RBP2.96□□□□□ -1.94
VAB2YEL005C YCL021W-AQ96VH3 125 aa2.96□□□□□ -1.94
VAB2YEL005C PMR1P13586 950 aa2.95□□□□□ -1.94
VAB2YEL005C CBS2P14905 389 aa2.95□□□□□ -1.94
VAB2YEL005C SLY1P22213 666 aa2.95□□□□□ -1.94
VAB2YEL005C RAD57P25301 460 aa2.95□□□□□ -1.94
VAB2YEL005C SDH3P33421 198 aa2.95□□□□□ -1.94
VAB2YEL005C PAD1P33751 242 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
VAB2YEL005C LTV1P34078 463 aa2.95□□□□□ -1.94
VAB2YEL005C OLA1P38219 394 aaKnown RBP2.95□□□□□ -1.94
VAB2YEL005C RFC3P38629 340 aa2.95□□□□□ -1.94
VAB2YEL005C RRP4P38792 359 aaKnown RBP2.95□□□□□ -1.94
VAB2YEL005C YIL067CP40514 678 aa2.95□□□□□ -1.94
VAB2YEL005C PHB2P50085 310 aa2.95□□□□□ -1.94
VAB2YEL005C PIB2P53191 635 aa2.95□□□□□ -1.94
VAB2YEL005C GPI15P53961 229 aa2.95□□□□□ -1.94
VAB2YEL005C YMR181CQ03231 154 aa2.95□□□□□ -1.94
VAB2YEL005C PPM1Q04081 328 aa2.95□□□□□ -1.94
VAB2YEL005C MDM30Q05930 598 aa2.95□□□□□ -1.94
VAB2YEL005C SNX3Q08826 162 aaKnown RBP2.95□□□□□ -1.94
VAB2YEL005C GPM3Q12326 303 aa2.95□□□□□ -1.94
VAB2YEL005C RAD61Q99359 647 aa2.95□□□□□ -1.94
VAB2YEL005C CPR4P25334 318 aa2.94□□□□□ -1.94
VAB2YEL005C SNT1P25357 1226 aa2.94□□□□□ -1.94
VAB2YEL005C SWH1P35845 1188 aa2.94□□□□□ -1.94
VAB2YEL005C MIX23P38162 196 aa2.94□□□□□ -1.94
VAB2YEL005C LCB2P40970 561 aa2.94□□□□□ -1.94
VAB2YEL005C BRO1P48582 844 aa2.94□□□□□ -1.94
VAB2YEL005C OAZ1Q02803 292 aa2.94□□□□□ -1.94
VAB2YEL005C SCW10Q04951 389 aa2.94□□□□□ -1.94
VAB2YEL005C PBA1Q05778 276 aa2.94□□□□□ -1.94
VAB2YEL005C NDE2Q07500 545 aa2.94□□□□□ -1.94
VAB2YEL005C SKI7Q08491 747 aaPredicted RBP2.94□□□□□ -1.94
VAB2YEL005C ORT1Q12375 292 aa2.94□□□□□ -1.94
VAB2YEL005C ADE4P04046 510 aaKnown RBP2.93□□□□□ -1.94
VAB2YEL005C CHS1P08004 1131 aa2.93□□□□□ -1.94
VAB2YEL005C MNE1P24720 663 aa2.93□□□□□ -1.94
VAB2YEL005C RNA14P25298 677 aaKnown RBP2.93□□□□□ -1.94
VAB2YEL005C RIM1P32445 135 aaKnown RBP2.93□□□□□ -1.94
VAB2YEL005C CYS4P32582 507 aaKnown RBP2.93□□□□□ -1.94
VAB2YEL005C MUD1P32605 298 aaKnown RBP2.93□□□□□ -1.94
VAB2YEL005C ATP3P38077 311 aaKnown RBP2.93□□□□□ -1.94
VAB2YEL005C ZTA1P38230 334 aaKnown RBP2.93□□□□□ -1.94
VAB2YEL005C TIF5P38431 405 aaKnown RBP2.93□□□□□ -1.94
VAB2YEL005C PTH1P38876 190 aaKnown RBP2.93□□□□□ -1.94
VAB2YEL005C FAD1P38913 306 aa2.93□□□□□ -1.94
VAB2YEL005C FAA2P39518 744 aa2.93□□□□□ -1.94
VAB2YEL005C GDI1P39958 451 aaKnown RBP2.93□□□□□ -1.94
VAB2YEL005C VHS2P40463 436 aa2.93□□□□□ -1.94
VAB2YEL005C YGL242CP53066 181 aa2.93□□□□□ -1.94
VAB2YEL005C ALF1P53904 254 aa2.93□□□□□ -1.94
VAB2YEL005C ERO1Q03103 563 aa2.93□□□□□ -1.94
VAB2YEL005C TSR1Q07381 788 aaKnown RBP2.93□□□□□ -1.94
VAB2YEL005C SPE3Q12074 293 aaKnown RBP2.93□□□□□ -1.94
VAB2YEL005C CDC21P06785 304 aa2.92□□□□□ -1.94
VAB2YEL005C SPT15P13393 240 aaKnown RBP2.92□□□□□ -1.94
VAB2YEL005C CTR86P25355 563 aa2.92□□□□□ -1.94
VAB2YEL005C HSP104P31539 908 aaKnown RBP2.92□□□□□ -1.94
VAB2YEL005C RRP1P35178 278 aaPredicted RBP2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms