RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A YEH1Q07804 573 aa0.43□□□□□ -2.34
SDH6YDR379C-A HRT1Q08273 121 aa0.43□□□□□ -2.34
SDH6YDR379C-A RLM1Q12224 676 aa0.43□□□□□ -2.34
SDH6YDR379C-A SNU66Q12420 587 aaPredicted RBP0.43□□□□□ -2.34
SDH6YDR379C-A FOL3Q12676 427 aaPredicted RBP0.43□□□□□ -2.34
SDH6YDR379C-A TPI1P00942 248 aaKnown RBP0.42□□□□□ -2.34
SDH6YDR379C-A ATP10P18496 279 aa0.42□□□□□ -2.34
SDH6YDR379C-A CHS3P29465 1165 aa0.42□□□□□ -2.34
SDH6YDR379C-A AGA2P32781 87 aa0.42□□□□□ -2.34
SDH6YDR379C-A ECT1P33412 323 aa0.42□□□□□ -2.34
SDH6YDR379C-A WBP1P33767 430 aaKnown RBP0.42□□□□□ -2.34
SDH6YDR379C-A PTH2P34222 208 aa0.42□□□□□ -2.34
SDH6YDR379C-A WSS1P38838 269 aa0.42□□□□□ -2.34
SDH6YDR379C-A LYS1P38998 373 aaRIP-Chip data0.42□□□□□ -2.34not detected
SDH6YDR379C-A CCT2P39076 527 aaKnown RBP0.42□□□□□ -2.34
SDH6YDR379C-A FRT2P39734 528 aa0.42□□□□□ -2.34
SDH6YDR379C-A DPH1P40487 425 aaKnown RBP0.42□□□□□ -2.34
SDH6YDR379C-A AZR1P50080 613 aa0.42□□□□□ -2.34
SDH6YDR379C-A YGL108CP53139 140 aa0.42□□□□□ -2.34
SDH6YDR379C-A MST27P53176 234 aa0.42□□□□□ -2.34
SDH6YDR379C-A YGR021WP53212 290 aa0.42□□□□□ -2.34
SDH6YDR379C-A GTR1Q00582 310 aa0.42□□□□□ -2.34
SDH6YDR379C-A NUP116Q02630 1113 aa0.42□□□□□ -2.34
SDH6YDR379C-A YDR387CQ04162 555 aa0.42□□□□□ -2.34
SDH6YDR379C-A HSP31Q04432 237 aa0.42□□□□□ -2.34
SDH6YDR379C-A BCH1Q05029 724 aa0.42□□□□□ -2.34
SDH6YDR379C-A YDR061WQ12298 539 aa0.42□□□□□ -2.34
SDH6YDR379C-A NOP58Q12499 511 aaKnown RBP0.42□□□□□ -2.34
SDH6YDR379C-A RMD5Q12508 421 aa0.42□□□□□ -2.34
SDH6YDR379C-A YDL007C-AQ2V2Q0 85 aa0.42□□□□□ -2.34
SDH6YDR379C-A RHO2P06781 192 aa0.41□□□□□ -2.34
SDH6YDR379C-A ZRC1P20107 442 aa0.41□□□□□ -2.34
SDH6YDR379C-A RAD57P25301 460 aa0.41□□□□□ -2.34
SDH6YDR379C-A PRP21P32524 280 aaPredicted RBP0.41□□□□□ -2.34
SDH6YDR379C-A RRN3P36070 627 aa0.41□□□□□ -2.34
SDH6YDR379C-A THI2P38141 450 aa0.41□□□□□ -2.34
SDH6YDR379C-A STP2P38704 541 aa0.41□□□□□ -2.34
SDH6YDR379C-A CHL4P38907 458 aa0.41□□□□□ -2.34
SDH6YDR379C-A PCF11P39081 626 aaPredicted RBP0.41□□□□□ -2.34
SDH6YDR379C-A GAT2P40209 560 aa0.41□□□□□ -2.34
SDH6YDR379C-A YIL029CP40538 142 aa0.41□□□□□ -2.34
SDH6YDR379C-A YIR035CP40579 254 aa0.41□□□□□ -2.34
SDH6YDR379C-A TFG2P41896 400 aaPredicted RBP0.41□□□□□ -2.34
SDH6YDR379C-A ATG18P43601 500 aa0.41□□□□□ -2.34
SDH6YDR379C-A SFH5P47008 294 aa0.41□□□□□ -2.34
SDH6YDR379C-A PET130P47065 347 aa0.41□□□□□ -2.34
SDH6YDR379C-A YGR066CP53242 292 aa0.41□□□□□ -2.34
SDH6YDR379C-A YGR067CP53243 804 aa0.41□□□□□ -2.34
SDH6YDR379C-A RTN1Q04947 295 aaKnown RBP0.41□□□□□ -2.34
SDH6YDR379C-A NMD4Q12129 218 aa0.41□□□□□ -2.34
SDH6YDR379C-A YGK3Q12222 375 aaPredicted RBP0.41□□□□□ -2.34
SDH6YDR379C-A ORT1Q12375 292 aa0.41□□□□□ -2.34
SDH6YDR379C-A AVL9Q12500 764 aa0.41□□□□□ -2.34
SDH6YDR379C-A YJR112W-AQ3E743 109 aa0.41□□□□□ -2.34
SDH6YDR379C-A YBR126W-AQ8TGU7 68 aa0.41□□□□□ -2.34
SDH6YDR379C-A RPS19AP07280 144 aaKnown RBP0.4□□□□□ -2.35
SDH6YDR379C-A RPS19BP07281 144 aaPredicted RBP0.4□□□□□ -2.35
SDH6YDR379C-A PUT4P15380 627 aa0.4□□□□□ -2.35
SDH6YDR379C-A DEP1P31385 405 aa0.4□□□□□ -2.35
SDH6YDR379C-A MRE11P32829 692 aa0.4□□□□□ -2.35
SDH6YDR379C-A SKN1P33336 771 aa0.4□□□□□ -2.35
SDH6YDR379C-A RRP1P35178 278 aaPredicted RBP0.4□□□□□ -2.35
SDH6YDR379C-A TOM20P35180 183 aa0.4□□□□□ -2.35
SDH6YDR379C-A ANR2P36090 516 aaPredicted RBP0.4□□□□□ -2.35
SDH6YDR379C-A YHR054CP38780 354 aa0.4□□□□□ -2.35
SDH6YDR379C-A SBE22P38814 852 aa0.4□□□□□ -2.35
SDH6YDR379C-A YPT35P38815 214 aaKnown RBP0.4□□□□□ -2.35
SDH6YDR379C-A COX14P39103 70 aa0.4□□□□□ -2.35
SDH6YDR379C-A FLC2P39719 783 aa0.4□□□□□ -2.35
SDH6YDR379C-A PTI1P39927 425 aaPredicted RBP0.4□□□□□ -2.35
SDH6YDR379C-A EGT2P42835 1041 aa0.4□□□□□ -2.35
SDH6YDR379C-A IGD1P43598 195 aa0.4□□□□□ -2.35
SDH6YDR379C-A YJL144WP47009 104 aa0.4□□□□□ -2.35
SDH6YDR379C-A RMD9P53140 646 aaKnown RBP0.4□□□□□ -2.35
SDH6YDR379C-A NGL3Q03210 505 aa0.4□□□□□ -2.35
SDH6YDR379C-A HOT1Q03213 719 aa0.4□□□□□ -2.35
SDH6YDR379C-A BET5Q03630 159 aa0.4□□□□□ -2.35
SDH6YDR379C-A TAP42Q04372 366 aa0.4□□□□□ -2.35
SDH6YDR379C-A SKI7Q08491 747 aaPredicted RBP0.4□□□□□ -2.35
SDH6YDR379C-A SEC39Q12745 709 aa0.4□□□□□ -2.35
SDH6YDR379C-A YLR278CQ05854 1341 aa0.39□□□□□ -2.35
SDH6YDR379C-A YPR096CO13587 100 aa0.39□□□□□ -2.35
SDH6YDR379C-A GAL80P04387 435 aa0.39□□□□□ -2.35
SDH6YDR379C-A DFR1P07807 211 aaKnown RBP RIP-Chip data0.39□□□□□ -2.35not detected
SDH6YDR379C-A SPB1P25582 841 aaPredicted RBP0.39□□□□□ -2.35
SDH6YDR379C-A RAD14P28519 371 aa0.39□□□□□ -2.35
SDH6YDR379C-A PHA2P32452 334 aa0.39□□□□□ -2.35
SDH6YDR379C-A YEF1P32622 495 aa0.39□□□□□ -2.35
SDH6YDR379C-A UTR5P32630 166 aa0.39□□□□□ -2.35
SDH6YDR379C-A CBF5P33322 483 aaKnown RBP RIP-Chip data0.39□□□□□ -2.35not detected
SDH6YDR379C-A NIP100P33420 868 aa0.39□□□□□ -2.35
SDH6YDR379C-A SGN1P40561 250 aaKnown RBP RIP-Chip data0.39□□□□□ -2.35not detected
SDH6YDR379C-A HAC1P41546 238 aa0.39□□□□□ -2.35
SDH6YDR379C-A HMS2P47175 358 aa0.39□□□□□ -2.35
SDH6YDR379C-A MRM2P53123 320 aa0.39□□□□□ -2.35
SDH6YDR379C-A DUO1P53168 247 aaKnown RBP0.39□□□□□ -2.35
SDH6YDR379C-A VHT1P53241 593 aa0.39□□□□□ -2.35
SDH6YDR379C-A CLD1P53264 445 aa0.39□□□□□ -2.35
SDH6YDR379C-A HST4P53688 370 aa0.39□□□□□ -2.35
SDH6YDR379C-A YIF1P53845 314 aaKnown RBP0.39□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms