RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeastyeast

Gene RUB1, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUB1YDR139C AFI1Q99222 893 aa3.26□□□□□ -1.89
RUB1YDR139C ISN1Q99312 450 aa3.26□□□□□ -1.89
RUB1YDR139C PDX1P16451 410 aa3.25□□□□□ -1.89
RUB1YDR139C LSB5P25369 354 aa3.25□□□□□ -1.89
RUB1YDR139C RPC53P25441 422 aa3.25□□□□□ -1.89
RUB1YDR139C ADK2P26364 225 aa3.25□□□□□ -1.89
RUB1YDR139C NAM9P27929 486 aa3.25□□□□□ -1.89
RUB1YDR139C MMS4P38257 691 aa3.25□□□□□ -1.89
RUB1YDR139C MTC6P38849 526 aa3.25□□□□□ -1.89
RUB1YDR139C BNI5P53890 448 aaKnown RBP3.25□□□□□ -1.89
RUB1YDR139C ORT1Q12375 292 aa3.25□□□□□ -1.89
RUB1YDR139C SCEIP03882 235 aa3.24□□□□□ -1.89
RUB1YDR139C REV1P12689 985 aa3.24□□□□□ -1.89
RUB1YDR139C SLY1P22213 666 aa3.24□□□□□ -1.89
RUB1YDR139C CTR86P25355 563 aa3.24□□□□□ -1.89
RUB1YDR139C GEX1P25596 615 aa3.24□□□□□ -1.89
RUB1YDR139C ITR1P30605 584 aa3.24□□□□□ -1.89
RUB1YDR139C TFB1P32776 642 aa3.24□□□□□ -1.89
RUB1YDR139C SOR1P35497 357 aaKnown RBP3.24□□□□□ -1.89
RUB1YDR139C KKQ8P36004 724 aa3.24□□□□□ -1.89
RUB1YDR139C PTH1P38876 190 aaKnown RBP3.24□□□□□ -1.89
RUB1YDR139C PRM5P40476 318 aa3.24□□□□□ -1.89
RUB1YDR139C MDG1P53885 366 aa3.24□□□□□ -1.89
RUB1YDR139C BET5Q03630 159 aa3.24□□□□□ -1.89
RUB1YDR139C TAF12Q03761 539 aa3.24□□□□□ -1.89
RUB1YDR139C PPM1Q04081 328 aa3.24□□□□□ -1.89
RUB1YDR139C SMA2Q04658 369 aa3.24□□□□□ -1.89
RUB1YDR139C SOR2Q07786 357 aa3.24□□□□□ -1.89
RUB1YDR139C SKI7Q08491 747 aaPredicted RBP3.24□□□□□ -1.89
RUB1YDR139C SPO7P18410 259 aa3.23□□□□□ -1.89
RUB1YDR139C URA4P20051 364 aa3.23□□□□□ -1.89
RUB1YDR139C BRF1P29056 596 aa3.23□□□□□ -1.89
RUB1YDR139C SMY1P32364 656 aaKnown RBP3.23□□□□□ -1.89
RUB1YDR139C APE3P37302 537 aaKnown RBP3.23□□□□□ -1.89
RUB1YDR139C PCF11P39081 626 aaPredicted RBP3.23□□□□□ -1.89
RUB1YDR139C REE1P40893 198 aa3.23□□□□□ -1.89
RUB1YDR139C HXT11P54862 567 aa3.23□□□□□ -1.89
RUB1YDR139C RSN1Q03516 953 aa3.23□□□□□ -1.89
RUB1YDR139C HER2Q03557 464 aa3.23□□□□□ -1.89
RUB1YDR139C YDR131CQ03899 556 aa3.23□□□□□ -1.89
RUB1YDR139C YMR130WQ04223 302 aa3.23□□□□□ -1.89
RUB1YDR139C ERB1Q04660 807 aaKnown RBP3.23□□□□□ -1.89
RUB1YDR139C DCS1Q06151 350 aa3.23□□□□□ -1.89
RUB1YDR139C DIS3Q08162 1001 aaKnown RBP3.23□□□□□ -1.89
RUB1YDR139C SNX3Q08826 162 aaKnown RBP3.23□□□□□ -1.89
RUB1YDR139C TMS1Q12116 473 aa3.23□□□□□ -1.89
RUB1YDR139C RMD5Q12508 421 aa3.23□□□□□ -1.89
RUB1YDR139C ILV5P06168 395 aaKnown RBP3.22□□□□□ -1.89
RUB1YDR139C CLN1P20437 546 aa3.22□□□□□ -1.89
RUB1YDR139C URA7P28274 579 aaKnown RBP3.22□□□□□ -1.89
RUB1YDR139C CAK1P43568 368 aaPredicted RBP3.22□□□□□ -1.89
RUB1YDR139C GPI15P53961 229 aa3.22□□□□□ -1.89
RUB1YDR139C GIP3Q03016 1276 aa3.22□□□□□ -1.89
RUB1YDR139C HOT1Q03213 719 aa3.22□□□□□ -1.89
RUB1YDR139C RMT2Q03305 412 aa3.22□□□□□ -1.89
RUB1YDR139C ACL4Q03771 387 aa3.22□□□□□ -1.89
RUB1YDR139C MED2Q12124 431 aa3.22□□□□□ -1.89
RUB1YDR139C PET123P17558 318 aa3.21□□□□□ -1.9
RUB1YDR139C CLB1P24868 471 aa3.21□□□□□ -1.9
RUB1YDR139C MUD1P32605 298 aaKnown RBP3.21□□□□□ -1.9
RUB1YDR139C RRN10P38204 145 aa3.21□□□□□ -1.9
RUB1YDR139C YBR137WP38276 179 aa3.21□□□□□ -1.9
RUB1YDR139C YAL037WP39728 267 aa3.21□□□□□ -1.9
RUB1YDR139C PHO86P46956 311 aa3.21□□□□□ -1.9
RUB1YDR139C PAL1Q05518 499 aaKnown RBP3.21□□□□□ -1.9
RUB1YDR139C HRI1Q05905 244 aaKnown RBP3.21□□□□□ -1.9
RUB1YDR139C MRPL35Q06678 367 aa3.21□□□□□ -1.9
RUB1YDR139C BUG1Q12191 341 aa3.21□□□□□ -1.9
RUB1YDR139C DAL2P25335 343 aa3.2□□□□□ -1.9
RUB1YDR139C LDB16P25587 256 aa3.2□□□□□ -1.9
RUB1YDR139C DBF4P32325 704 aa3.2□□□□□ -1.9
RUB1YDR139C YEL045CP32616 141 aa3.2□□□□□ -1.9
RUB1YDR139C SLM4P38247 162 aa3.2□□□□□ -1.9
RUB1YDR139C SHE10P53075 577 aa3.2□□□□□ -1.9
RUB1YDR139C RPT4P53549 437 aaKnown RBP3.2□□□□□ -1.9
RUB1YDR139C MMR1Q06324 491 aa3.2□□□□□ -1.9
RUB1YDR139C RRG7Q08774 242 aaPredicted RBP3.2□□□□□ -1.9
RUB1YDR139C TY1B-AO13527 1196 aaKnown RBP3.19□□□□□ -1.9
RUB1YDR139C TRP1P00912 224 aa3.19□□□□□ -1.9
RUB1YDR139C HOM3P10869 527 aa3.19□□□□□ -1.9
RUB1YDR139C SPO12P17123 173 aa3.19□□□□□ -1.9
RUB1YDR139C ERV1P27882 189 aa3.19□□□□□ -1.9
RUB1YDR139C RRT2P38332 387 aa3.19□□□□□ -1.9
RUB1YDR139C AZR1P50080 613 aa3.19□□□□□ -1.9
RUB1YDR139C PHB2P50085 310 aa3.19□□□□□ -1.9
RUB1YDR139C CWC25P53854 179 aaKnown RBP3.19□□□□□ -1.9
RUB1YDR139C OCA2P53949 197 aa3.19□□□□□ -1.9
RUB1YDR139C OAZ1Q02803 292 aa3.19□□□□□ -1.9
RUB1YDR139C ISA2Q12425 185 aa3.19□□□□□ -1.9
RUB1YDR139C CPR2P23285 205 aa3.18□□□□□ -1.9
RUB1YDR139C CDC60P26637 1090 aaKnown RBP3.18□□□□□ -1.9
RUB1YDR139C MNS1P32906 549 aa3.18□□□□□ -1.9
RUB1YDR139C MPE1P35728 441 aaKnown RBP3.18□□□□□ -1.9
RUB1YDR139C RRP4P38792 359 aaKnown RBP3.18□□□□□ -1.9
RUB1YDR139C PRE5P40302 234 aaKnown RBP3.18□□□□□ -1.9
RUB1YDR139C PAN6P40459 309 aa3.18□□□□□ -1.9
RUB1YDR139C SDT1P53078 280 aa3.18□□□□□ -1.9
RUB1YDR139C MTM1P53320 366 aa3.18□□□□□ -1.9
RUB1YDR139C VPS54Q12071 889 aa3.18□□□□□ -1.9
RUB1YDR139C ATG34Q12292 412 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms