RNA–Protein interactions for RNA: YDL201W

TRM8, Transcript of Noncatalytic subunit of a tRNA methyltransferase complex, yeast

Gene TRM8, Length 861 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM8	YDL201W	NCB2	Q92317	146 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	PMA1	P05030	918 aa	Known RBP	4.6	□□□□□ -1.67
TRM8	YDL201W	CDC36	P06100	191 aa	Predicted RBP	4.6	□□□□□ -1.67
TRM8	YDL201W	PUT2	P07275	575 aa		4.6	□□□□□ -1.67
TRM8	YDL201W	TUB3	P09734	445 aa	Known RBP	4.6	□□□□□ -1.67
TRM8	YDL201W	MRP13	P12686	339 aa		4.6	□□□□□ -1.67
TRM8	YDL201W	ZIP1	P31111	875 aa		4.6	□□□□□ -1.67
TRM8	YDL201W	ARO4	P32449	370 aa	Known RBP	4.6	□□□□□ -1.67
TRM8	YDL201W	ATP11	P32453	318 aa		4.6	□□□□□ -1.67
TRM8	YDL201W	REC114	P32841	428 aa		4.6	□□□□□ -1.67
TRM8	YDL201W	YKL071W	P36086	256 aa		4.6	□□□□□ -1.67
TRM8	YDL201W	ASC1	P38011	319 aa	Known RBP	4.6	□□□□□ -1.67
TRM8	YDL201W	YMR262W	P38430	313 aa		4.6	□□□□□ -1.67
TRM8	YDL201W	KSP1	P38691	1029 aa	Known RBP	4.6	□□□□□ -1.67
TRM8	YDL201W	PHM8	P40025	321 aa		4.6	□□□□□ -1.67
TRM8	YDL201W	GET2	P40056	285 aa		4.6	□□□□□ -1.67
TRM8	YDL201W	SCC4	P40090	624 aa		4.6	□□□□□ -1.67
TRM8	YDL201W	SWP82	P43554	623 aa		4.6	□□□□□ -1.67
TRM8	YDL201W	BNA6	P43619	295 aa		4.6	□□□□□ -1.67
TRM8	YDL201W	RIB4	P50861	169 aa	Predicted RBP	4.6	□□□□□ -1.67
TRM8	YDL201W	DRN1	P53255	507 aa	Known RBP	4.6	□□□□□ -1.67
TRM8	YDL201W	DBP6	P53734	629 aa	Known RBP	4.6	□□□□□ -1.67
TRM8	YDL201W	YMR310C	Q04867	317 aa	Predicted RBP	4.6	□□□□□ -1.67
TRM8	YDL201W	STE23	Q06010	1027 aa		4.6	□□□□□ -1.67
TRM8	YDL201W	MRI1	Q06489	411 aa	Known RBP	4.6	□□□□□ -1.67
TRM8	YDL201W	DIS3	Q08162	1001 aa	Known RBP	4.6	□□□□□ -1.67
TRM8	YDL201W	BTS1	Q12051	335 aa		4.6	□□□□□ -1.67
TRM8	YDL201W	INP53	Q12271	1107 aa		4.6	□□□□□ -1.67
TRM8	YDL201W	GIS3	Q12418	502 aa		4.6	□□□□□ -1.67
TRM8	YDL201W	YBL111C	Q3E7Y5	667 aa		4.6	□□□□□ -1.67
TRM8	YDL201W	TAD3	Q9URQ3	322 aa		4.6	□□□□□ -1.67
TRM8	YDL201W	SSK22	P25390	1331 aa	Predicted RBP	4.6	□□□□□ -1.67
TRM8	YDL201W	RVS161	P25343	265 aa	Known RBP	4.59	□□□□□ -1.67
TRM8	YDL201W	KRE2	P27809	442 aa		4.59	□□□□□ -1.67
TRM8	YDL201W	BEM1	P29366	551 aa		4.59	□□□□□ -1.67
TRM8	YDL201W	DUR1,2	P32528	1835 aa	Known RBP	4.59	□□□□□ -1.67
TRM8	YDL201W	SPR1	P32603	445 aa		4.59	□□□□□ -1.67
TRM8	YDL201W	RPC25	P35718	212 aa		4.59	□□□□□ -1.67
TRM8	YDL201W	PTK1	P36002	662 aa	Predicted RBP	4.59	□□□□□ -1.67
TRM8	YDL201W	SNU114	P36048	1008 aa	Known RBP	4.59	□□□□□ -1.67
TRM8	YDL201W	RPF2	P36160	344 aa	Known RBP	4.59	□□□□□ -1.67
TRM8	YDL201W	MNN2	P38069	597 aa		4.59	□□□□□ -1.67
TRM8	YDL201W	RPP1	P38786	293 aa		4.59	□□□□□ -1.67
TRM8	YDL201W	CIN4	P39110	191 aa		4.59	□□□□□ -1.67
TRM8	YDL201W	YGL185C	P53100	379 aa		4.59	□□□□□ -1.67
TRM8	YDL201W	TIM21	P53220	239 aa		4.59	□□□□□ -1.67
TRM8	YDL201W	ROT1	Q03691	256 aa		4.59	□□□□□ -1.67
TRM8	YDL201W	RRP17	Q04031	235 aa	Predicted RBP	4.59	□□□□□ -1.67
TRM8	YDL201W	YLR283W	Q05867	314 aa		4.59	□□□□□ -1.67
TRM8	YDL201W	PDR8	Q06149	701 aa		4.59	□□□□□ -1.67
TRM8	YDL201W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
TRM8	YDL201W	RDR1	Q08904	546 aa		4.59	□□□□□ -1.67
TRM8	YDL201W	GET4	Q12125	312 aa		4.59	□□□□□ -1.67
TRM8	YDL201W	FMP16	Q12497	93 aa		4.59	□□□□□ -1.67
TRM8	YDL201W	LAG2	Q92325	660 aa		4.59	□□□□□ -1.67
TRM8	YDL201W	PDR18	P53756	1333 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	CDC21	P06785	304 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	ARG80	P07249	177 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	MAS1	P10507	462 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	ALG1	P16661	449 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	ITR1	P30605	584 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	BCS1	P32839	456 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	SKG6	P32900	734 aa	Predicted RBP	4.58	□□□□□ -1.68
TRM8	YDL201W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
TRM8	YDL201W	HES1	P35843	434 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	OCT1	P35999	772 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	MAL32	P38158	584 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	ERG7	P38604	731 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	MSS4	P38994	779 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	ELO1	P39540	310 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	CDC40	P40968	455 aa	Predicted RBP	4.58	□□□□□ -1.68
TRM8	YDL201W	AIM22	P47051	409 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	MSY1	P48527	492 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	VPS73	P53142	486 aa	Known RBP	4.58	□□□□□ -1.68
TRM8	YDL201W	COQ6	P53318	479 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	MAL12	P53341	584 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	PLB2	Q03674	706 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	YMR160W	Q03823	816 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	RPC11	Q04307	110 aa	Predicted RBP	4.58	□□□□□ -1.68
TRM8	YDL201W	RXT3	Q07458	294 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	WHI4	Q07655	649 aa	Known RBP	4.58	□□□□□ -1.68
TRM8	YDL201W	TPO1	Q07824	586 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	NSE1	Q07913	336 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	CRT10	Q08226	957 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	YPL216W	Q08964	1102 aa		4.58	□□□□□ -1.68
TRM8	YDL201W	BRR1	Q99177	341 aa	Predicted RBP	4.58	□□□□□ -1.68
TRM8	YDL201W	RAP1	P11938	827 aa		4.57	□□□□□ -1.68
TRM8	YDL201W	YPK2	P18961	677 aa		4.57	□□□□□ -1.68
TRM8	YDL201W	PRP4	P20053	465 aa	Known RBP	4.57	□□□□□ -1.68
TRM8	YDL201W	KGD1	P20967	1014 aa	Known RBP	4.57	□□□□□ -1.68
TRM8	YDL201W	DAL81	P21657	970 aa		4.57	□□□□□ -1.68
TRM8	YDL201W	SEC62	P21825	274 aa		4.57	□□□□□ -1.68
TRM8	YDL201W	RME1	P32338	300 aa	Known RBP	4.57	□□□□□ -1.68
TRM8	YDL201W	SPT10	P35208	640 aa		4.57	□□□□□ -1.68
TRM8	YDL201W	VPS51	P36116	164 aa		4.57	□□□□□ -1.68
TRM8	YDL201W	AIM29	P36154	155 aa		4.57	□□□□□ -1.68
TRM8	YDL201W	VHC1	P38329	1120 aa		4.57	□□□□□ -1.68
TRM8	YDL201W	IMD2	P38697	523 aa	Known RBP	4.57	□□□□□ -1.68
TRM8	YDL201W	SPC97	P38863	823 aa		4.57	□□□□□ -1.68
TRM8	YDL201W	YHR182W	P38870	785 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms