RNA–Protein interactions for RNA: YDL146W

LDB17, Transcript of Protein involved in the regulation of endocytosis, yeast

Gene LDB17, Length 1,476 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDB17	YDL146W	TAE1	P38340	232 aa		4.6	□□□□□ -1.67
LDB17	YDL146W	VBA2	P38358	474 aa	Known RBP	4.6	□□□□□ -1.67
LDB17	YDL146W	MBB1	P39534	108 aa		4.6	□□□□□ -1.67
LDB17	YDL146W	SAP1	P39955	897 aa	Known RBP	4.6	□□□□□ -1.67
LDB17	YDL146W	YFL015C	P43578	164 aa		4.6	□□□□□ -1.67
LDB17	YDL146W	TRF5	P48561	642 aa	Known RBP	4.6	□□□□□ -1.67
LDB17	YDL146W	YNL146W	P53906	100 aa		4.6	□□□□□ -1.67
LDB17	YDL146W	GIS3	Q12418	502 aa		4.6	□□□□□ -1.67
LDB17	YDL146W	COX3	P00420	269 aa		4.59	□□□□□ -1.67
LDB17	YDL146W	RPL24A	P04449	155 aa	Known RBP	4.59	□□□□□ -1.67
LDB17	YDL146W	COR1	P07256	457 aa		4.59	□□□□□ -1.67
LDB17	YDL146W	PET111	P08468	800 aa		4.59	□□□□□ -1.67
LDB17	YDL146W	MEI5	P32489	222 aa		4.59	□□□□□ -1.67
LDB17	YDL146W	YKR015C	P36111	568 aa		4.59	□□□□□ -1.67
LDB17	YDL146W	DBP8	P38719	431 aa		4.59	□□□□□ -1.67
LDB17	YDL146W	YHR045W	P38775	560 aa		4.59	□□□□□ -1.67
LDB17	YDL146W	EXO1	P39875	702 aa		4.59	□□□□□ -1.67
LDB17	YDL146W	YER085C	P40058	173 aa		4.59	□□□□□ -1.67
LDB17	YDL146W	ATM1	P40416	690 aa		4.59	□□□□□ -1.67
LDB17	YDL146W	SLG1	P54867	378 aa		4.59	□□□□□ -1.67
LDB17	YDL146W	STD1	Q02794	444 aa		4.59	□□□□□ -1.67
LDB17	YDL146W	SNZ1	Q03148	297 aa		4.59	□□□□□ -1.67
LDB17	YDL146W	YMR310C	Q04867	317 aa	Predicted RBP	4.59	□□□□□ -1.67
LDB17	YDL146W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	RIP-Chip
LDB17	YDL146W	AQY1	P0CD91	305 aa		4.58	□□□□□ -1.68
LDB17	YDL146W	PEP5	P12868	1029 aa		4.58	□□□□□ -1.68
LDB17	YDL146W	CDC23	P16522	626 aa		4.58	□□□□□ -1.68
LDB17	YDL146W	SGV1	P23293	657 aa	Known RBP	4.58	□□□□□ -1.68
LDB17	YDL146W	RHB1	P25378	209 aa		4.58	□□□□□ -1.68
LDB17	YDL146W	PSO2	P30620	661 aa		4.58	□□□□□ -1.68
LDB17	YDL146W	HSP104	P31539	908 aa	Known RBP	4.58	□□□□□ -1.68
LDB17	YDL146W	SIN4	P32259	974 aa		4.58	□□□□□ -1.68
LDB17	YDL146W	DUG2	P38149	878 aa		4.58	□□□□□ -1.68
LDB17	YDL146W	SPC97	P38863	823 aa		4.58	□□□□□ -1.68
LDB17	YDL146W	GPI16	P38875	610 aa		4.58	□□□□□ -1.68
LDB17	YDL146W	STN1	P38960	494 aa		4.58	□□□□□ -1.68
LDB17	YDL146W	RCY1	P39531	840 aa		4.58	□□□□□ -1.68
LDB17	YDL146W	SHQ1	P40486	507 aa	Predicted RBP	4.58	□□□□□ -1.68
LDB17	YDL146W	GAT1	P43574	510 aa		4.58	□□□□□ -1.68
LDB17	YDL146W	YJL043W	P47053	257 aa		4.58	□□□□□ -1.68
LDB17	YDL146W	TIM21	P53220	239 aa		4.58	□□□□□ -1.68
LDB17	YDL146W	COG2	P53271	262 aa		4.58	□□□□□ -1.68
LDB17	YDL146W	MRPS17	Q03246	237 aa	Predicted RBP	4.58	□□□□□ -1.68
LDB17	YDL146W	EMI2	Q04409	500 aa	Known RBP	4.58	□□□□□ -1.68
LDB17	YDL146W	GPN3	Q06543	272 aa		4.58	□□□□□ -1.68
LDB17	YDL146W	FMP16	Q12497	93 aa		4.58	□□□□□ -1.68
LDB17	YDL146W	RAV1	P47104	1357 aa		4.58	□□□□□ -1.68
LDB17	YDL146W	SEC3	P33332	1336 aa	Known RBP	4.57	□□□□□ -1.68
LDB17	YDL146W	JIP3	O13555	125 aa		4.57	□□□□□ -1.68
LDB17	YDL146W	CDC36	P06100	191 aa	Predicted RBP	4.57	□□□□□ -1.68
LDB17	YDL146W	MAS1	P10507	462 aa		4.57	□□□□□ -1.68
LDB17	YDL146W	KSS1	P14681	368 aa		4.57	□□□□□ -1.68
LDB17	YDL146W	MBR1	P23493	339 aa		4.57	□□□□□ -1.68
LDB17	YDL146W	HXT2	P23585	541 aa		4.57	□□□□□ -1.68
LDB17	YDL146W	MGR1	P25573	417 aa		4.57	□□□□□ -1.68
LDB17	YDL146W	RME1	P32338	300 aa	Known RBP	4.57	□□□□□ -1.68
LDB17	YDL146W	ARO4	P32449	370 aa	Known RBP	4.57	□□□□□ -1.68
LDB17	YDL146W	SPR1	P32603	445 aa		4.57	□□□□□ -1.68
LDB17	YDL146W	GDA1	P32621	518 aa		4.57	□□□□□ -1.68
LDB17	YDL146W	SPP381	P38282	291 aa	Predicted RBP	4.57	□□□□□ -1.68
LDB17	YDL146W	SLX1	P38324	304 aa		4.57	□□□□□ -1.68
LDB17	YDL146W	EFM2	P38347	419 aa		4.57	□□□□□ -1.68
LDB17	YDL146W	ALP1	P38971	573 aa		4.57	□□□□□ -1.68
LDB17	YDL146W	TDA10	P42938	290 aa		4.57	□□□□□ -1.68
LDB17	YDL146W	KTR6	P54070	446 aa		4.57	□□□□□ -1.68
LDB17	YDL146W	SRL4	Q03085	281 aa		4.57	□□□□□ -1.68
LDB17	YDL146W	RTN1	Q04947	295 aa	Known RBP	4.57	□□□□□ -1.68
LDB17	YDL146W	PDR8	Q06149	701 aa		4.57	□□□□□ -1.68
LDB17	YDL146W	NSE1	Q07913	336 aa		4.57	□□□□□ -1.68
LDB17	YDL146W	NRT1	Q08485	598 aa		4.57	□□□□□ -1.68
LDB17	YDL146W	Q0010	Q9ZZX9	128 aa		4.57	□□□□□ -1.68
LDB17	YDL146W	SCEI	P03882	235 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	ADE4	P04046	510 aa	Known RBP	4.56	□□□□□ -1.68
LDB17	YDL146W	NFT1	P0CE68	1218 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	KRS1	P15180	591 aa	Known RBP	4.56	□□□□□ -1.68
LDB17	YDL146W	FUS3	P16892	353 aa	Known RBP	4.56	□□□□□ -1.68
LDB17	YDL146W	RAD23	P32628	398 aa	Known RBP	4.56	□□□□□ -1.68
LDB17	YDL146W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
LDB17	YDL146W	YSC83	P32792	385 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	PRS1	P32895	427 aa	Known RBP	4.56	□□□□□ -1.68
LDB17	YDL146W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
LDB17	YDL146W	APD1	P38281	316 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	FMC1	P40491	155 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	AAT1	Q01802	451 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	YMR178W	Q03219	274 aa	Known RBP	4.56	□□□□□ -1.68
LDB17	YDL146W	PLM2	Q04383	521 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	GTO3	Q04806	366 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	MDM30	Q05930	598 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	MRPL35	Q06678	367 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	PEX27	Q08580	376 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	RDR1	Q08904	546 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	ARG4	P04076	463 aa	Predicted RBP	4.56	□□□□□ -1.68
LDB17	YDL146W	CDC21	P06785	304 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	RPI1	P23250	407 aa	Known RBP	4.56	□□□□□ -1.68
LDB17	YDL146W	YUR1	P26725	428 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	YPS1	P32329	569 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	BUD2	P33314	1104 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	SHP1	P34223	423 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	ECM4	P36156	370 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	RRN10	P38204	145 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms