RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeastyeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPO21YDL140C RMA1P36001 430 aaKnown RBP3.65□□□□□ -1.83
RPO21YDL140C PRS4P38063 326 aaPredicted RBP3.65□□□□□ -1.83
RPO21YDL140C RPS26AP39938 119 aaKnown RBP3.65□□□□□ -1.83
RPO21YDL140C RPS26BP39939 119 aaKnown RBP3.65□□□□□ -1.83
RPO21YDL140C YIL108WP40483 696 aaKnown RBP3.65□□□□□ -1.83
RPO21YDL140C YJR149WP47177 404 aa3.65□□□□□ -1.83
RPO21YDL140C PRM1P53835 661 aa3.65□□□□□ -1.83
RPO21YDL140C ROD1Q02805 837 aa3.65□□□□□ -1.83
RPO21YDL140C ATG21Q02887 496 aa3.65□□□□□ -1.83
RPO21YDL140C PNP1Q05788 311 aa3.65□□□□□ -1.83
RPO21YDL140C YPR147CQ06522 304 aaKnown RBP3.65□□□□□ -1.83
RPO21YDL140C MDM36Q06820 579 aa3.65□□□□□ -1.83
RPO21YDL140C PIN2Q12057 282 aa3.65□□□□□ -1.83
RPO21YDL140C YOR342CQ12182 319 aa3.65□□□□□ -1.83
RPO21YDL140C NPC2Q12408 173 aa3.65□□□□□ -1.83
RPO21YDL140C PSF1Q12488 208 aa3.65□□□□□ -1.83
RPO21YDL140C HTA1P04911 132 aaKnown RBP3.65□□□□□ -1.83
RPO21YDL140C HTA2P04912 132 aa3.65□□□□□ -1.83
RPO21YDL140C CDC31P06704 161 aaKnown RBP3.65□□□□□ -1.83
RPO21YDL140C AGP1P25376 633 aa3.65□□□□□ -1.83
RPO21YDL140C FUN26P31381 517 aa3.65□□□□□ -1.83
RPO21YDL140C TAT2P38967 592 aa3.65□□□□□ -1.83
RPO21YDL140C FMP52P40008 231 aa3.65□□□□□ -1.83
RPO21YDL140C XBP1P40489 647 aa3.65□□□□□ -1.83
RPO21YDL140C PFA3P42836 336 aa3.65□□□□□ -1.83
RPO21YDL140C YJR039WP47107 1121 aa3.65□□□□□ -1.83
RPO21YDL140C ABM1P47146 123 aa3.65□□□□□ -1.83
RPO21YDL140C NGL3Q03210 505 aa3.65□□□□□ -1.83
RPO21YDL140C EBS1Q03466 884 aaKnown RBP3.65□□□□□ -1.83
RPO21YDL140C GLO4Q12320 285 aa3.65□□□□□ -1.83
RPO21YDL140C TIM9O74700 87 aa3.65□□□□□ -1.83
RPO21YDL140C SED4P25365 1065 aa3.65□□□□□ -1.83
RPO21YDL140C NGG1P32494 702 aa3.65□□□□□ -1.83
RPO21YDL140C YHR218WP38899 603 aa3.65□□□□□ -1.83
RPO21YDL140C YDR089WP38966 869 aa3.65□□□□□ -1.83
RPO21YDL140C ATF2P53296 535 aa3.65□□□□□ -1.83
RPO21YDL140C YNR062CP53748 327 aa3.65□□□□□ -1.83
RPO21YDL140C YNR064CP53750 290 aa3.65□□□□□ -1.83
RPO21YDL140C YKR005CQ02203 525 aa3.65□□□□□ -1.83
RPO21YDL140C YOR389WQ08912 624 aa3.65□□□□□ -1.83
RPO21YDL140C YPL278CQ08990 100 aa3.65□□□□□ -1.83
RPO21YDL140C MRH1Q12117 320 aaPredicted RBP3.65□□□□□ -1.83
RPO21YDL140C TFB5Q3E7C1 72 aaPredicted RBP3.65□□□□□ -1.83
RPO21YDL140C AI5_ALPHAQ9ZZX1 630 aa3.65□□□□□ -1.83
RPO21YDL140C SPO14P36126 1683 aa3.64□□□□□ -1.83
RPO21YDL140C TPK3P05986 398 aa3.64□□□□□ -1.83
RPO21YDL140C SNF3P10870 884 aa3.64□□□□□ -1.83
RPO21YDL140C DAP2P18962 818 aa3.64□□□□□ -1.83
RPO21YDL140C URA4P20051 364 aa3.64□□□□□ -1.83
RPO21YDL140C YCR016WP25617 290 aaKnown RBP3.64□□□□□ -1.83
RPO21YDL140C MKK1P32490 508 aa3.64□□□□□ -1.83
RPO21YDL140C LOT5P34234 306 aa3.64□□□□□ -1.83
RPO21YDL140C YHR127WP38833 243 aaKnown RBP3.64□□□□□ -1.83
RPO21YDL140C CDC40P40968 455 aaPredicted RBP3.64□□□□□ -1.83
RPO21YDL140C SFH5P47008 294 aa3.64□□□□□ -1.83
RPO21YDL140C KEL2P50090 882 aa3.64□□□□□ -1.83
RPO21YDL140C CUS2P53830 285 aaPredicted RBP3.64□□□□□ -1.83
RPO21YDL140C ERB1Q04660 807 aaKnown RBP3.64□□□□□ -1.83
RPO21YDL140C IRC19Q07843 230 aa3.64□□□□□ -1.83
RPO21YDL140C DAS2Q12084 232 aa3.64□□□□□ -1.83
RPO21YDL140C MSH5Q12175 901 aa3.64□□□□□ -1.83
RPO21YDL140C MRP13P12686 339 aa3.64□□□□□ -1.83
RPO21YDL140C ZRC1P20107 442 aa3.64□□□□□ -1.83
RPO21YDL140C MDH3P32419 343 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83 RIP-Chip
RPO21YDL140C YPT11P48559 417 aa3.64□□□□□ -1.83
RPO21YDL140C ASN2P49090 572 aaKnown RBP3.64□□□□□ -1.83
RPO21YDL140C PNG1Q02890 363 aa3.64□□□□□ -1.83
RPO21YDL140C GAS3Q03655 524 aa3.64□□□□□ -1.83
RPO21YDL140C TRM12Q04235 462 aa3.64□□□□□ -1.83
RPO21YDL140C YDR124WQ04608 324 aa3.64□□□□□ -1.83
RPO21YDL140C HBT1Q07653 1046 aaKnown RBP3.64□□□□□ -1.83
RPO21YDL140C THP3Q12049 470 aaKnown RBP3.64□□□□□ -1.83
RPO21YDL140C EXO70P19658 623 aa3.64□□□□□ -1.83
RPO21YDL140C PDC2P32896 925 aa3.64□□□□□ -1.83
RPO21YDL140C TIP20P33891 701 aa3.64□□□□□ -1.83
RPO21YDL140C PBP2P38151 413 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
RPO21YDL140C GRE3P38715 327 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
RPO21YDL140C PEX18P38855 283 aa3.64□□□□□ -1.83
RPO21YDL140C AIM46P38885 310 aa3.64□□□□□ -1.83
RPO21YDL140C HEM14P40012 539 aa3.64□□□□□ -1.83
RPO21YDL140C SET4P42948 560 aa3.64□□□□□ -1.83
RPO21YDL140C GCD14P46959 383 aaPredicted RBP3.64□□□□□ -1.83
RPO21YDL140C IKS1P47042 667 aa3.64□□□□□ -1.83
RPO21YDL140C TIM13P53299 105 aa3.64□□□□□ -1.83
RPO21YDL140C TRS31Q03337 283 aa3.64□□□□□ -1.83
RPO21YDL140C CGI121Q03705 181 aaKnown RBP3.64□□□□□ -1.83
RPO21YDL140C GUP2Q08929 609 aa3.64□□□□□ -1.83
RPO21YDL140C YOR338WQ99326 363 aa3.64□□□□□ -1.83
RPO21YDL140C RPL17AP05740 184 aaKnown RBP3.64□□□□□ -1.83
RPO21YDL140C GLK1P17709 500 aaKnown RBP3.64□□□□□ -1.83
RPO21YDL140C GRR1P24814 1151 aa3.64□□□□□ -1.83
RPO21YDL140C YJU3P28321 313 aa3.64□□□□□ -1.83
RPO21YDL140C DSS4P32601 143 aa3.64□□□□□ -1.83
RPO21YDL140C RPT1P33299 467 aaKnown RBP3.64□□□□□ -1.83
RPO21YDL140C YBR053CP38235 358 aa3.64□□□□□ -1.83
RPO21YDL140C YBR096WP38256 230 aa3.64□□□□□ -1.83
RPO21YDL140C RFC3P38629 340 aa3.64□□□□□ -1.83
RPO21YDL140C RSP5P39940 809 aaKnown RBP3.64□□□□□ -1.83
RPO21YDL140C PRK1P40494 810 aa3.64□□□□□ -1.83
RPO21YDL140C YFL052WP43551 465 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms