RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	PCA1	P38360	1216 aa		5.62	□□□□□ -1.51
SUB2	YDL084W	FAD1	P38913	306 aa		5.62	□□□□□ -1.51
SUB2	YDL084W	YJL206C	P39529	758 aa		5.62	□□□□□ -1.51
SUB2	YDL084W	SAH1	P39954	449 aa	Known RBP	5.62	□□□□□ -1.51
SUB2	YDL084W	YKE4	P40544	346 aa		5.62	□□□□□ -1.51
SUB2	YDL084W	MRPS18	P42847	217 aa		5.62	□□□□□ -1.51
SUB2	YDL084W	HIT1	P46973	164 aa		5.62	□□□□□ -1.51
SUB2	YDL084W	IMA1	P53051	589 aa		5.62	□□□□□ -1.51
SUB2	YDL084W	YGR126W	P53274	230 aa		5.62	□□□□□ -1.51
SUB2	YDL084W	DBP6	P53734	629 aa	Known RBP	5.62	□□□□□ -1.51
SUB2	YDL084W	RPA49	Q01080	415 aa	Predicted RBP	5.62	□□□□□ -1.51
SUB2	YDL084W	AAT1	Q01802	451 aa		5.62	□□□□□ -1.51
SUB2	YDL084W	OPT2	Q06593	877 aa		5.62	□□□□□ -1.51
SUB2	YDL084W	RTT109	Q07794	436 aa		5.62	□□□□□ -1.51
SUB2	YDL084W	YLR040C	Q07988	224 aa		5.62	□□□□□ -1.51
SUB2	YDL084W	HRK1	Q08732	759 aa	Known RBP	5.62	□□□□□ -1.51
SUB2	YDL084W	LEA1	Q08963	238 aa	Predicted RBP	5.62	□□□□□ -1.51
SUB2	YDL084W	GPM2	Q12008	311 aa		5.62	□□□□□ -1.51
SUB2	YDL084W	CWC2	Q12046	339 aa	Predicted RBP	5.62	□□□□□ -1.51
SUB2	YDL084W	RTK1	Q12100	620 aa	Predicted RBP	5.62	□□□□□ -1.51
SUB2	YDL084W	VPS63	O13549	108 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	YOR304C-A	O14468	76 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	NUC1	P08466	329 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	RPL1A	P0CX43	217 aa	Known RBP	5.61	□□□□□ -1.51
SUB2	YDL084W	RPL1B	P0CX44	217 aa	Known RBP	5.61	□□□□□ -1.51
SUB2	YDL084W	PET54	P10834	293 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	PYC1	P11154	1178 aa	Known RBP	5.61	□□□□□ -1.51
SUB2	YDL084W	REV1	P12689	985 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	CAF20	P12962	161 aa	Known RBP	5.61	□□□□□ -1.51
SUB2	YDL084W	GUK1	P15454	187 aa	Known RBP	5.61	□□□□□ -1.51
SUB2	YDL084W	URA6	P15700	204 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	SER1	P33330	395 aa	Known RBP	5.61	□□□□□ -1.51
SUB2	YDL084W	BET3	P36149	193 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	SKG1	P36169	355 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	SHM1	P37292	490 aa	Predicted RBP	5.61	□□□□□ -1.51
SUB2	YDL084W	ECM13	P38195	257 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	ERV46	P39727	415 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	RBG1	P39729	369 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	OPT1	P40897	799 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	GDS1	P41913	522 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	IDP2	P41939	412 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	SER2	P42941	309 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	UBP6	P43593	499 aa	Known RBP	5.61	□□□□□ -1.51
SUB2	YDL084W	PHO86	P46956	311 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	FMP33	P46998	180 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	YJR096W	P47137	282 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	SBH2	P52871	88 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	NQM1	P53228	333 aa	Predicted RBP	5.61	□□□□□ -1.51
SUB2	YDL084W	GPI1	P53306	609 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	CPR6	P53691	371 aa	Known RBP	5.61	□□□□□ -1.51
SUB2	YDL084W	CAF40	P53829	373 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	ALG11	P53954	548 aa	Known RBP	5.61	□□□□□ -1.51
SUB2	YDL084W	DYN2	Q02647	92 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	ADI1	Q03677	179 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	ECM22	Q05958	814 aa	Predicted RBP	5.61	□□□□□ -1.51
SUB2	YDL084W	FRQ1	Q06389	190 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	FMP45	Q07651	309 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	YLR036C	Q07986	203 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	PEX15	Q08215	383 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	YNG1	Q08465	219 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	GRE1	Q08969	168 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	YPL150W	Q12152	901 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	5.61	□□□□□ -1.51	not detected
SUB2	YDL084W	YLR108C	Q12259	485 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	MCM16	Q12262	181 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	GLO4	Q12320	285 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	CTF3	Q12748	733 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	RGS2	Q99188	309 aa		5.61	□□□□□ -1.51
SUB2	YDL084W	YCF1	P39109	1515 aa	Known RBP	5.61	□□□□□ -1.51
SUB2	YDL084W	LYS2	P07702	1392 aa		5.6	□□□□□ -1.51
SUB2	YDL084W	SCH9	P11792	824 aa	Known RBP	5.6	□□□□□ -1.51
SUB2	YDL084W	MAS2	P11914	482 aa		5.6	□□□□□ -1.51
SUB2	YDL084W	YPK1	P12688	680 aa	Known RBP	5.6	□□□□□ -1.51
SUB2	YDL084W	RNR3	P21672	869 aa	Known RBP	5.6	□□□□□ -1.51
SUB2	YDL084W	PET18	P25362	215 aa		5.6	□□□□□ -1.51
SUB2	YDL084W	MCM5	P29496	775 aa	Known RBP	5.6	□□□□□ -1.51
SUB2	YDL084W	SPT14	P32363	452 aa		5.6	□□□□□ -1.51
SUB2	YDL084W	HXT4	P32467	576 aa		5.6	□□□□□ -1.51
SUB2	YDL084W	MKK2	P32491	506 aa		5.6	□□□□□ -1.51
SUB2	YDL084W	SPS19	P32573	292 aa	Known RBP	5.6	□□□□□ -1.51
SUB2	YDL084W	ABD1	P32783	436 aa	Predicted RBP	5.6	□□□□□ -1.51
SUB2	YDL084W	UPS2	P35200	230 aa		5.6	□□□□□ -1.51
SUB2	YDL084W	OAR1	P35731	278 aa		5.6	□□□□□ -1.51
SUB2	YDL084W	APT2	P36973	181 aa		5.6	□□□□□ -1.51
SUB2	YDL084W	SFB3	P38810	929 aa		5.6	□□□□□ -1.51
SUB2	YDL084W	LYS9	P38999	446 aa		5.6	□□□□□ -1.51
SUB2	YDL084W	UME6	P39001	836 aa		5.6	□□□□□ -1.51
SUB2	YDL084W	AKR1	P39010	764 aa		5.6	□□□□□ -1.51
SUB2	YDL084W	BDH1	P39714	382 aa		5.6	□□□□□ -1.51
SUB2	YDL084W	INP51	P40559	946 aa	Known RBP	5.6	□□□□□ -1.51
SUB2	YDL084W	GZF3	P42944	551 aa	Known RBP	5.6	□□□□□ -1.51
SUB2	YDL084W	ARC1	P46672	376 aa	Known RBP	5.6	□□□□□ -1.51
SUB2	YDL084W	YAR1	P46683	200 aa		5.6	□□□□□ -1.51
SUB2	YDL084W	TRS85	P46944	698 aa		5.6	□□□□□ -1.51
SUB2	YDL084W	YJL016W	P47072	561 aa		5.6	□□□□□ -1.51
SUB2	YDL084W	MSB3	P48566	633 aa	Predicted RBP	5.6	□□□□□ -1.51
SUB2	YDL084W	VPS62	P53285	467 aa		5.6	□□□□□ -1.51
SUB2	YDL084W	VPS75	P53853	264 aa		5.6	□□□□□ -1.51
SUB2	YDL084W	APM1	Q00776	475 aa	Predicted RBP	5.6	□□□□□ -1.51
SUB2	YDL084W	ELP3	Q02908	557 aa	Known RBP	5.6	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 18 ms