RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W YPR011CQ12251 326 aa7.61□□□□□ -1.19
ABP1YCR088W BBP1Q12365 385 aa7.61□□□□□ -1.19
ABP1YCR088W SRN2Q99176 213 aa7.61□□□□□ -1.19
ABP1YCR088W SAM35P14693 329 aa7.61□□□□□ -1.19
ABP1YCR088W GRX2P17695 143 aaKnown RBP7.61□□□□□ -1.19
ABP1YCR088W RSC6P25632 483 aa7.61□□□□□ -1.19
ABP1YCR088W IDH2P28241 369 aaKnown RBP7.61□□□□□ -1.19
ABP1YCR088W UTP30P36144 274 aaKnown RBP7.61□□□□□ -1.19
ABP1YCR088W IPI1P38803 334 aaPredicted RBP7.61□□□□□ -1.19
ABP1YCR088W SSN3P39073 555 aa7.61□□□□□ -1.19
ABP1YCR088W DDI1P40087 428 aa7.61□□□□□ -1.19
ABP1YCR088W YIL161WP40449 235 aaKnown RBP7.61□□□□□ -1.19
ABP1YCR088W FET5P43561 622 aa7.61□□□□□ -1.19
ABP1YCR088W MNT2P53059 558 aa7.61□□□□□ -1.19
ABP1YCR088W VPS74Q06385 345 aa7.61□□□□□ -1.19
ABP1YCR088W YPR196WQ06595 470 aa7.61□□□□□ -1.19
ABP1YCR088W SMF3Q12078 473 aaPredicted RBP7.61□□□□□ -1.19
ABP1YCR088W RAD59Q12223 238 aa7.61□□□□□ -1.19
ABP1YCR088W HSP42Q12329 375 aa7.61□□□□□ -1.19
ABP1YCR088W PNS1Q12412 539 aa7.61□□□□□ -1.19
ABP1YCR088W SIR3P06701 978 aa7.6□□□□□ -1.19
ABP1YCR088W FUM1P08417 488 aaKnown RBP7.6□□□□□ -1.19
ABP1YCR088W DBF2P22204 572 aa7.6□□□□□ -1.19
ABP1YCR088W SIS1P25294 352 aaKnown RBP7.6□□□□□ -1.19
ABP1YCR088W CHA1P25379 360 aaKnown RBP7.6□□□□□ -1.19
ABP1YCR088W SPT14P32363 452 aa7.6□□□□□ -1.19
ABP1YCR088W HXT4P32467 576 aa7.6□□□□□ -1.19
ABP1YCR088W LHP1P33399 275 aaKnown RBP7.6□□□□□ -1.19
ABP1YCR088W FMP23P38231 175 aa7.6□□□□□ -1.19
ABP1YCR088W YHR219WP38900 624 aa7.6□□□□□ -1.19
ABP1YCR088W HXT6P39003 570 aaKnown RBP7.6□□□□□ -1.19
ABP1YCR088W HXT7P39004 570 aa7.6□□□□□ -1.19
ABP1YCR088W SER2P42941 309 aa7.6□□□□□ -1.19
ABP1YCR088W GLG2P47011 380 aa7.6□□□□□ -1.19
ABP1YCR088W YJL043WP47053 257 aa7.6□□□□□ -1.19
ABP1YCR088W ARO8P53090 500 aaKnown RBP7.6□□□□□ -1.19
ABP1YCR088W MRH4P53166 561 aa7.6□□□□□ -1.19
ABP1YCR088W YGR015CP53208 328 aa7.6□□□□□ -1.19
ABP1YCR088W NQM1P53228 333 aaPredicted RBP7.6□□□□□ -1.19
ABP1YCR088W YNL260CP53846 198 aa7.6□□□□□ -1.19
ABP1YCR088W YNL140CP53910 189 aa7.6□□□□□ -1.19
ABP1YCR088W COS7Q07788 383 aa7.6□□□□□ -1.19
ABP1YCR088W SIA1Q12212 622 aa7.6□□□□□ -1.19
ABP1YCR088W NFI1Q12216 726 aa7.6□□□□□ -1.19
ABP1YCR088W YOR012WQ12351 137 aa7.6□□□□□ -1.19
ABP1YCR088W YPR096CO13587 100 aa7.59□□□□□ -1.19
ABP1YCR088W MNE1P24720 663 aa7.59□□□□□ -1.19
ABP1YCR088W SPS19P32573 292 aaKnown RBP7.59□□□□□ -1.19
ABP1YCR088W CAT2P32796 670 aaKnown RBP7.59□□□□□ -1.19
ABP1YCR088W PET112P33893 541 aa7.59□□□□□ -1.19
ABP1YCR088W ISC1P40015 477 aaKnown RBP7.59□□□□□ -1.19
ABP1YCR088W RET2P43621 546 aa7.59□□□□□ -1.19
ABP1YCR088W YJR030CP47101 745 aa7.59□□□□□ -1.19
ABP1YCR088W VPS62P53285 467 aa7.59□□□□□ -1.19
ABP1YCR088W NPL3Q01560 414 aaKnown RBP RIP-Chip data7.59□□□□□ -1.19not detected
ABP1YCR088W VHS1Q03785 461 aa7.59□□□□□ -1.19
ABP1YCR088W FIN1Q03898 291 aa7.59□□□□□ -1.19
ABP1YCR088W BUD7Q08754 746 aa7.59□□□□□ -1.19
ABP1YCR088W RRP42Q12277 265 aaPredicted RBP7.59□□□□□ -1.19
ABP1YCR088W RGT2Q12300 763 aa7.59□□□□□ -1.19
ABP1YCR088W MET2P08465 486 aa7.59□□□□□ -1.2
ABP1YCR088W RSR1P13856 272 aa7.59□□□□□ -1.2
ABP1YCR088W STF2P16965 84 aa7.59□□□□□ -1.2
ABP1YCR088W TRX3P25372 127 aa7.59□□□□□ -1.2
ABP1YCR088W IDH1P28834 360 aaKnown RBP RIP-Chip data7.59□□□□□ -1.2not detected
ABP1YCR088W LYP1P32487 611 aa7.59□□□□□ -1.2
ABP1YCR088W DCW1P36091 449 aa7.59□□□□□ -1.2
ABP1YCR088W CBP4P37267 147 aa7.59□□□□□ -1.2
ABP1YCR088W BAP2P38084 609 aa7.59□□□□□ -1.2
ABP1YCR088W STP2P38704 541 aa7.59□□□□□ -1.2
ABP1YCR088W INM1P38710 295 aa7.59□□□□□ -1.2
ABP1YCR088W GDI1P39958 451 aaKnown RBP7.59□□□□□ -1.2
ABP1YCR088W RRG9P40156 214 aa7.59□□□□□ -1.2
ABP1YCR088W YKE4P40544 346 aa7.59□□□□□ -1.2
ABP1YCR088W BIT61P47041 543 aa7.59□□□□□ -1.2
ABP1YCR088W JHD2P47156 728 aaPredicted RBP7.59□□□□□ -1.2
ABP1YCR088W GIP3Q03016 1276 aa7.59□□□□□ -1.2
ABP1YCR088W CIA1Q05583 330 aa7.59□□□□□ -1.2
ABP1YCR088W RRT8Q08219 342 aa7.59□□□□□ -1.2
ABP1YCR088W YBL029C-AQ3E756 94 aa7.59□□□□□ -1.2
ABP1YCR088W TSC13Q99190 310 aa7.59□□□□□ -1.2
ABP1YCR088W YOR338WQ99326 363 aa7.59□□□□□ -1.2
ABP1YCR088W RPL6BP05739 176 aaKnown RBP7.58□□□□□ -1.2
ABP1YCR088W LAT1P12695 482 aaKnown RBP7.58□□□□□ -1.2
ABP1YCR088W MER1P16523 270 aa7.58□□□□□ -1.2
ABP1YCR088W RDS2P19541 446 aaKnown RBP7.58□□□□□ -1.2
ABP1YCR088W CLN2P20438 545 aa7.58□□□□□ -1.2
ABP1YCR088W SYP1P25623 870 aaKnown RBP7.58□□□□□ -1.2
ABP1YCR088W YIM1P28625 365 aa7.58□□□□□ -1.2
ABP1YCR088W ISF1P32488 338 aa7.58□□□□□ -1.2
ABP1YCR088W YBR071WP38243 211 aa7.58□□□□□ -1.2
ABP1YCR088W QDR2P40474 542 aa7.58□□□□□ -1.2
ABP1YCR088W AZF1P41696 914 aa7.58□□□□□ -1.2
ABP1YCR088W BPL1P48445 690 aaPredicted RBP7.58□□□□□ -1.2
ABP1YCR088W RTS3P53289 263 aa7.58□□□□□ -1.2
ABP1YCR088W PRM1P53835 661 aa7.58□□□□□ -1.2
ABP1YCR088W PFA5Q03289 374 aa7.58□□□□□ -1.2
ABP1YCR088W RNH1Q04740 348 aa7.58□□□□□ -1.2
ABP1YCR088W SPO77Q06134 477 aa7.58□□□□□ -1.2
ABP1YCR088W HTZ1Q12692 134 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 47.8 ms