RNA–Protein interactions for RNA: YBR272C

HSM3, Transcript of Proteasome-interacting protein, yeast

Gene HSM3, Length 1,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSM3	YBR272C	NBP35	P52920	328 aa		6.58	□□□□□ -1.36
HSM3	YBR272C	ERV14	P53173	138 aa		6.58	□□□□□ -1.36
HSM3	YBR272C	YGR017W	P53210	297 aa		6.58	□□□□□ -1.36
HSM3	YBR272C	YAP1802	P53309	568 aa		6.58	□□□□□ -1.36
HSM3	YBR272C	YTP1	P53584	459 aa		6.58	□□□□□ -1.36
HSM3	YBR272C	YCL001W-A	P87012	153 aa		6.58	□□□□□ -1.36
HSM3	YBR272C	YSA1	Q01976	231 aa		6.58	□□□□□ -1.36
HSM3	YBR272C	CTF19	Q02732	369 aa		6.58	□□□□□ -1.36
HSM3	YBR272C	MTG1	Q03151	367 aa	Predicted RBP	6.58	□□□□□ -1.36
HSM3	YBR272C	ACL4	Q03771	387 aa		6.58	□□□□□ -1.36
HSM3	YBR272C	ARA2	Q04212	335 aa		6.58	□□□□□ -1.36
HSM3	YBR272C	PEX10	Q05568	337 aa		6.58	□□□□□ -1.36
HSM3	YBR272C	ECM30	Q06673	1274 aa		6.58	□□□□□ -1.36
HSM3	YBR272C	CSM4	Q08955	156 aa		6.58	□□□□□ -1.36
HSM3	YBR272C	RRP42	Q12277	265 aa	Predicted RBP	6.58	□□□□□ -1.36
HSM3	YBR272C	YOR012W	Q12351	137 aa		6.58	□□□□□ -1.36
HSM3	YBR272C	EFG1	Q3E705	233 aa	Known RBP	6.58	□□□□□ -1.36
HSM3	YBR272C	RHB1	P25378	209 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	DCC1	P25559	380 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	PER1	P25625	357 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	PDC6	P26263	563 aa	Known RBP	6.57	□□□□□ -1.36
HSM3	YBR272C	CSG2	P35206	410 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	ALY1	P36117	915 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	GLY1	P37303	387 aa	Known RBP	6.57	□□□□□ -1.36
HSM3	YBR272C	AME1	P38313	324 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	PCM1	P38628	557 aa	Known RBP	6.57	□□□□□ -1.36
HSM3	YBR272C	COS8	P38723	381 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	CCT2	P39076	527 aa	Known RBP	6.57	□□□□□ -1.36
HSM3	YBR272C	SEC72	P39742	193 aa	Known RBP	6.57	□□□□□ -1.36
HSM3	YBR272C	YEL025C	P39991	1188 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	KTR7	P40504	517 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	MET28	P40573	187 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	SNG1	P46950	547 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	PMT3	P47190	753 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	LYS20	P48570	428 aa	Known RBP	6.57	□□□□□ -1.36
HSM3	YBR272C	PYK2	P52489	506 aa	Known RBP	6.57	□□□□□ -1.36
HSM3	YBR272C	YGL108C	P53139	140 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	GTF1	P53260	183 aa	Predicted RBP	6.57	□□□□□ -1.36
HSM3	YBR272C	SAE3	P89114	91 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	6.57	□□□□□ -1.36	not detected
HSM3	YBR272C	SED5	Q01590	340 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	YPL068C	Q02749	293 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	TRM82	Q03774	444 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	NEJ1	Q06148	342 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	LYS21	Q12122	440 aa	Known RBP	6.57	□□□□□ -1.36
HSM3	YBR272C	YOL107W	Q12239	342 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	INP53	Q12271	1107 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	PSY3	Q12318	242 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	ISA2	Q12425	185 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	YPR015C	Q12531	247 aa		6.57	□□□□□ -1.36
HSM3	YBR272C	PGA3	Q12746	312 aa	Known RBP	6.57	□□□□□ -1.36
HSM3	YBR272C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	6.56	□□□□□ -1.36	not detected
HSM3	YBR272C	CYT1	P07143	309 aa		6.56	□□□□□ -1.36
HSM3	YBR272C	RPS6A	P0CX37	236 aa	Known RBP	6.56	□□□□□ -1.36
HSM3	YBR272C	RPS6B	P0CX38	236 aa	Predicted RBP	6.56	□□□□□ -1.36
HSM3	YBR272C	MTF1	P14908	341 aa	Known RBP	6.56	□□□□□ -1.36
HSM3	YBR272C	UGA1	P17649	471 aa		6.56	□□□□□ -1.36
HSM3	YBR272C	MRPL44	P19956	98 aa		6.56	□□□□□ -1.36
HSM3	YBR272C	SPO11	P23179	398 aa		6.56	□□□□□ -1.36
HSM3	YBR272C	VMA5	P31412	392 aa	Known RBP	6.56	□□□□□ -1.36
HSM3	YBR272C	KAP122	P32767	1081 aa		6.56	□□□□□ -1.36
HSM3	YBR272C	RPS1A	P33442	255 aa	Known RBP	6.56	□□□□□ -1.36
HSM3	YBR272C	TGL1	P34163	548 aa		6.56	□□□□□ -1.36
HSM3	YBR272C	TSA1	P34760	196 aa	Known RBP	6.56	□□□□□ -1.36
HSM3	YBR272C	CBT1	P36038	271 aa	Predicted RBP	6.56	□□□□□ -1.36
HSM3	YBR272C	YKL077W	P36081	392 aa		6.56	□□□□□ -1.36
HSM3	YBR272C	YBR139W	P38109	508 aa		6.56	□□□□□ -1.36
HSM3	YBR272C	EXO1	P39875	702 aa		6.56	□□□□□ -1.36
HSM3	YBR272C	DPH1	P40487	425 aa	Known RBP	6.56	□□□□□ -1.36
HSM3	YBR272C	LCB2	P40970	561 aa		6.56	□□□□□ -1.36
HSM3	YBR272C	FIG4	P42837	879 aa		6.56	□□□□□ -1.36
HSM3	YBR272C	YGR201C	P42936	225 aa		6.56	□□□□□ -1.36
HSM3	YBR272C	YFL040W	P43562	540 aa		6.56	□□□□□ -1.36
HSM3	YBR272C	CAF16	P43569	289 aa		6.56	□□□□□ -1.36
HSM3	YBR272C	GNA1	P43577	159 aa	Predicted RBP	6.56	□□□□□ -1.36
HSM3	YBR272C	PHO86	P46956	311 aa		6.56	□□□□□ -1.36
HSM3	YBR272C	YJL043W	P47053	257 aa		6.56	□□□□□ -1.36
HSM3	YBR272C	YGR250C	P53316	781 aa	Known RBP	6.56	□□□□□ -1.36
HSM3	YBR272C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	6.56	□□□□□ -1.36	not detected
HSM3	YBR272C	CDC123	Q05791	360 aa		6.56	□□□□□ -1.36
HSM3	YBR272C	YLR283W	Q05867	314 aa		6.56	□□□□□ -1.36
HSM3	YBR272C	SYC1	Q08553	188 aa	Predicted RBP	6.56	□□□□□ -1.36
HSM3	YBR272C	MCH5	Q08777	521 aa		6.56	□□□□□ -1.36
HSM3	YBR272C	YDR262W	Q12331	272 aa		6.56	□□□□□ -1.36
HSM3	YBR272C	SKS1	Q12505	502 aa		6.56	□□□□□ -1.36
HSM3	YBR272C	RGS2	Q99188	309 aa		6.56	□□□□□ -1.36
HSM3	YBR272C	MSF1	P08425	469 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	IMA3	P0CW40	589 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	IMA4	P0CW41	589 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	ARO3	P14843	370 aa	Known RBP	6.55	□□□□□ -1.36
HSM3	YBR272C	HEM15	P16622	393 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	PHO91	P27514	894 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	RPC25	P35718	212 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	MRPL15	P36523	253 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	YPK3	P38070	525 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	ECM8	P38246	354 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	AIM3	P38266	947 aa	Known RBP	6.55	□□□□□ -1.36
HSM3	YBR272C	RRT2	P38332	387 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	BIT2	P38346	545 aa		6.55	□□□□□ -1.36
HSM3	YBR272C	YHL008C	P38750	627 aa		6.55	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms