RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	VOA1	P53262	265 aa		4.73	□□□□□ -1.65
SMP1	YBR182C	LSB1	P53281	241 aa		4.73	□□□□□ -1.65
SMP1	YBR182C	RTT102	P53330	157 aa		4.73	□□□□□ -1.65
SMP1	YBR182C	YIF1	P53845	314 aa	Known RBP	4.73	□□□□□ -1.65
SMP1	YBR182C	SPO19	Q03029	223 aa		4.73	□□□□□ -1.65
SMP1	YBR182C	ARP10	Q04549	284 aa		4.73	□□□□□ -1.65
SMP1	YBR182C	TMN2	Q04562	672 aa		4.73	□□□□□ -1.65
SMP1	YBR182C	STE23	Q06010	1027 aa		4.73	□□□□□ -1.65
SMP1	YBR182C	YPR172W	Q06608	200 aa		4.73	□□□□□ -1.65
SMP1	YBR182C	YOR012W	Q12351	137 aa		4.73	□□□□□ -1.65
SMP1	YBR182C	MES1	P00958	751 aa	Known RBP	4.72	□□□□□ -1.65
SMP1	YBR182C	HNM1	P19807	563 aa		4.72	□□□□□ -1.65
SMP1	YBR182C	SNC1	P31109	117 aa		4.72	□□□□□ -1.65
SMP1	YBR182C	RAD24	P32641	659 aa		4.72	□□□□□ -1.65
SMP1	YBR182C	SPT10	P35208	640 aa		4.72	□□□□□ -1.65
SMP1	YBR182C	YKL070W	P36087	169 aa		4.72	□□□□□ -1.65
SMP1	YBR182C	APD1	P38281	316 aa		4.72	□□□□□ -1.65
SMP1	YBR182C	ERG7	P38604	731 aa		4.72	□□□□□ -1.65
SMP1	YBR182C	BNA3	P47039	444 aa	Known RBP	4.72	□□□□□ -1.65
SMP1	YBR182C	CAB5	Q03941	241 aa		4.72	□□□□□ -1.65
SMP1	YBR182C	ERV41	Q04651	352 aa		4.72	□□□□□ -1.65
SMP1	YBR182C	AAD15	Q08361	143 aa		4.72	□□□□□ -1.65
SMP1	YBR182C	RDL1	Q12305	139 aa	Known RBP	4.72	□□□□□ -1.65
SMP1	YBR182C	GLE1	Q12315	538 aa		4.72	□□□□□ -1.65
SMP1	YBR182C	DCP1	Q12517	231 aa	Predicted RBP	4.72	□□□□□ -1.65
SMP1	YBR182C	SUC2	P00724	532 aa		4.71	□□□□□ -1.66
SMP1	YBR182C	CHS1	P08004	1131 aa		4.71	□□□□□ -1.66
SMP1	YBR182C	SSA3	P09435	649 aa	Known RBP	4.71	□□□□□ -1.66
SMP1	YBR182C	RPI1	P23250	407 aa	Known RBP	4.71	□□□□□ -1.66
SMP1	YBR182C	HXT2	P23585	541 aa		4.71	□□□□□ -1.66
SMP1	YBR182C	SMY1	P32364	656 aa	Known RBP	4.71	□□□□□ -1.66
SMP1	YBR182C	COT1	P32798	439 aa		4.71	□□□□□ -1.66
SMP1	YBR182C	KKQ8	P36004	724 aa		4.71	□□□□□ -1.66
SMP1	YBR182C	PET100	P38958	111 aa		4.71	□□□□□ -1.66
SMP1	YBR182C	ALP1	P38971	573 aa		4.71	□□□□□ -1.66
SMP1	YBR182C	YMR124W	P39523	943 aa	Known RBP	4.71	□□□□□ -1.66
SMP1	YBR182C	ATM1	P40416	690 aa		4.71	□□□□□ -1.66
SMP1	YBR182C	SNL1	P40548	159 aa		4.71	□□□□□ -1.66
SMP1	YBR182C	SPG5	P42933	373 aa		4.71	□□□□□ -1.66
SMP1	YBR182C	STD1	Q02794	444 aa		4.71	□□□□□ -1.66
SMP1	YBR182C	TAF12	Q03761	539 aa		4.71	□□□□□ -1.66
SMP1	YBR182C	YDR387C	Q04162	555 aa		4.71	□□□□□ -1.66
SMP1	YBR182C	SEG1	Q04279	960 aa		4.71	□□□□□ -1.66
SMP1	YBR182C	CSI1	Q04368	295 aa		4.71	□□□□□ -1.66
SMP1	YBR182C	APC4	Q04601	652 aa		4.71	□□□□□ -1.66
SMP1	YBR182C	RRG8	Q06109	277 aa		4.71	□□□□□ -1.66
SMP1	YBR182C	ARR1	Q06596	294 aa		4.71	□□□□□ -1.66
SMP1	YBR182C	SSK1	Q07084	712 aa		4.71	□□□□□ -1.66
SMP1	YBR182C	RMD5	Q12508	421 aa		4.71	□□□□□ -1.66
SMP1	YBR182C	RPN13	O13563	156 aa		4.7	□□□□□ -1.66
SMP1	YBR182C	DST1	P07273	309 aa		4.7	□□□□□ -1.66
SMP1	YBR182C	SEC62	P21825	274 aa		4.7	□□□□□ -1.66
SMP1	YBR182C	RAD57	P25301	460 aa		4.7	□□□□□ -1.66
SMP1	YBR182C	YMC1	P32331	307 aa		4.7	□□□□□ -1.66
SMP1	YBR182C	APE2	P32454	952 aa	Known RBP	4.7	□□□□□ -1.66
SMP1	YBR182C	RGT1	P32862	1170 aa		4.7	□□□□□ -1.66
SMP1	YBR182C	YER079W	P40052	210 aa	Known RBP	4.7	□□□□□ -1.66
SMP1	YBR182C	GCD14	P46959	383 aa	Predicted RBP	4.7	□□□□□ -1.66
SMP1	YBR182C	KEL2	P50090	882 aa		4.7	□□□□□ -1.66
SMP1	YBR182C	MND1	P53102	219 aa		4.7	□□□□□ -1.66
SMP1	YBR182C	SOL4	P53315	255 aa		4.7	□□□□□ -1.66
SMP1	YBR182C	VAC14	Q06708	880 aa		4.7	□□□□□ -1.66
SMP1	YBR182C	IRC10	Q08118	586 aa		4.7	□□□□□ -1.66
SMP1	YBR182C	YLL056C	Q12177	298 aa		4.7	□□□□□ -1.66
SMP1	YBR182C	FRE7	Q12333	620 aa		4.7	□□□□□ -1.66
SMP1	YBR182C	APC2	Q12440	853 aa		4.7	□□□□□ -1.66
SMP1	YBR182C	HIS4	P00815	799 aa	Known RBP	4.69	□□□□□ -1.66
SMP1	YBR182C	BAR1	P12630	587 aa		4.69	□□□□□ -1.66
SMP1	YBR182C	UNG1	P12887	359 aa		4.69	□□□□□ -1.66
SMP1	YBR182C	UTR4	P32626	227 aa		4.69	□□□□□ -1.66
SMP1	YBR182C	TPO5	P36029	618 aa		4.69	□□□□□ -1.66
SMP1	YBR182C	RTT107	P38850	1070 aa		4.69	□□□□□ -1.66
SMP1	YBR182C	PHO90	P39535	881 aa		4.69	□□□□□ -1.66
SMP1	YBR182C	PRP39	P39682	629 aa	Known RBP	4.69	□□□□□ -1.66
SMP1	YBR182C	QRI1	P43123	477 aa	Known RBP	4.69	□□□□□ -1.66
SMP1	YBR182C	TRS85	P46944	698 aa		4.69	□□□□□ -1.66
SMP1	YBR182C	RIB4	P50861	169 aa	Predicted RBP	4.69	□□□□□ -1.66
SMP1	YBR182C	DBP6	P53734	629 aa	Known RBP	4.69	□□□□□ -1.66
SMP1	YBR182C	RHO4	Q00246	291 aa		4.69	□□□□□ -1.66
SMP1	YBR182C	YPL014W	Q02606	381 aa		4.69	□□□□□ -1.66
SMP1	YBR182C	MRPL35	Q06678	367 aa		4.69	□□□□□ -1.66
SMP1	YBR182C	YDL218W	Q07629	317 aa		4.69	□□□□□ -1.66
SMP1	YBR182C	REX4	Q08237	289 aa		4.69	□□□□□ -1.66
SMP1	YBR182C	LSP1	Q12230	341 aa	Known RBP	4.69	□□□□□ -1.66
SMP1	YBR182C	LDB17	Q12342	491 aa		4.69	□□□□□ -1.66
SMP1	YBR182C	RAD51	P25454	400 aa		4.68	□□□□□ -1.66
SMP1	YBR182C	YHR122W	P38829	231 aa		4.68	□□□□□ -1.66
SMP1	YBR182C	YHR177W	P38867	453 aa		4.68	□□□□□ -1.66
SMP1	YBR182C	SDS3	P40505	327 aa		4.68	□□□□□ -1.66
SMP1	YBR182C	HXT9	P40885	567 aa		4.68	□□□□□ -1.66
SMP1	YBR182C	LOH1	P47055	219 aa		4.68	□□□□□ -1.66
SMP1	YBR182C	GPI1	P53306	609 aa		4.68	□□□□□ -1.66
SMP1	YBR182C	EAF7	P53911	425 aa	Known RBP	4.68	□□□□□ -1.66
SMP1	YBR182C	GIP3	Q03016	1276 aa		4.68	□□□□□ -1.66
SMP1	YBR182C	URC2	Q04411	772 aa		4.68	□□□□□ -1.66
SMP1	YBR182C	GAL4	P04386	881 aa		4.67	□□□□□ -1.66
SMP1	YBR182C	YLL053C	P0CD98	152 aa		4.67	□□□□□ -1.66
SMP1	YBR182C	PET123	P17558	318 aa		4.67	□□□□□ -1.66
SMP1	YBR182C	MEK1	P24719	497 aa	Predicted RBP	4.67	□□□□□ -1.66
SMP1	YBR182C	SLM5	P25345	492 aa	Known RBP	4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 53.4 ms