RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeast

Gene PRE7, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRE7	YBL041W	SRB5	P32585	307 aa		4.84	□□□□□ -1.63
PRE7	YBL041W	NFU1	P32860	256 aa		4.84	□□□□□ -1.63
PRE7	YBL041W	RRP14	P36080	434 aa	Known RBP	4.84	□□□□□ -1.63
PRE7	YBL041W	SPC97	P38863	823 aa		4.84	□□□□□ -1.63
PRE7	YBL041W	DHH1	P39517	506 aa	Known RBP	4.84	□□□□□ -1.63
PRE7	YBL041W	SMX2	P40204	77 aa	Known RBP	4.84	□□□□□ -1.63
PRE7	YBL041W	MNT3	P40549	630 aa		4.84	□□□□□ -1.63
PRE7	YBL041W	SSY5	P47002	699 aa		4.84	□□□□□ -1.63
PRE7	YBL041W	YJR030C	P47101	745 aa		4.84	□□□□□ -1.63
PRE7	YBL041W	ERP6	P53198	216 aa		4.84	□□□□□ -1.63
PRE7	YBL041W	FHN1	P53279	174 aa		4.84	□□□□□ -1.63
PRE7	YBL041W	YMR209C	Q03648	457 aa		4.84	□□□□□ -1.63
PRE7	YBL041W	CSN9	Q03981	162 aa		4.84	□□□□□ -1.63
PRE7	YBL041W	ROY1	Q04847	553 aa		4.84	□□□□□ -1.63
PRE7	YBL041W	YOL024W	Q08172	172 aa		4.84	□□□□□ -1.63
PRE7	YBL041W	RGT2	Q12300	763 aa		4.84	□□□□□ -1.63
PRE7	YBL041W	HSP42	Q12329	375 aa		4.84	□□□□□ -1.63
PRE7	YBL041W	SLH1	P53327	1967 aa	Known RBP	4.84	□□□□□ -1.64
PRE7	YBL041W	ILV2	P07342	687 aa	Known RBP	4.83	□□□□□ -1.64
PRE7	YBL041W	ADE1	P27616	306 aa		4.83	□□□□□ -1.64
PRE7	YBL041W	SIN4	P32259	974 aa		4.83	□□□□□ -1.64
PRE7	YBL041W	PHA2	P32452	334 aa		4.83	□□□□□ -1.64
PRE7	YBL041W	SDH3	P33421	198 aa		4.83	□□□□□ -1.64
PRE7	YBL041W	NUP120	P35729	1037 aa		4.83	□□□□□ -1.64
PRE7	YBL041W	FLO10	P36170	1169 aa		4.83	□□□□□ -1.64
PRE7	YBL041W	RRN10	P38204	145 aa		4.83	□□□□□ -1.64
PRE7	YBL041W	EHT1	P38295	451 aa		4.83	□□□□□ -1.64
PRE7	YBL041W	SIC1	P38634	284 aa		4.83	□□□□□ -1.64
PRE7	YBL041W	YHR112C	P38716	378 aa		4.83	□□□□□ -1.64
PRE7	YBL041W	PTI1	P39927	425 aa	Predicted RBP	4.83	□□□□□ -1.64
PRE7	YBL041W	PEP8	P40335	379 aa		4.83	□□□□□ -1.64
PRE7	YBL041W	ELP2	P42935	788 aa		4.83	□□□□□ -1.64
PRE7	YBL041W	MIC19	P43594	170 aa		4.83	□□□□□ -1.64
PRE7	YBL041W	PAN2	P53010	1115 aa	Predicted RBP	4.83	□□□□□ -1.64
PRE7	YBL041W	VPS73	P53142	486 aa	Known RBP	4.83	□□□□□ -1.64
PRE7	YBL041W	YNL260C	P53846	198 aa		4.83	□□□□□ -1.64
PRE7	YBL041W	IBD2	P53892	351 aa		4.83	□□□□□ -1.64
PRE7	YBL041W	SUR7	P54003	302 aa		4.83	□□□□□ -1.64
PRE7	YBL041W	SED5	Q01590	340 aa		4.83	□□□□□ -1.64
PRE7	YBL041W	NAN1	Q02931	896 aa	Known RBP	4.83	□□□□□ -1.64
PRE7	YBL041W	PEX25	Q02969	394 aa		4.83	□□□□□ -1.64
PRE7	YBL041W	CHS5	Q12114	671 aa	Known RBP	4.83	□□□□□ -1.64
PRE7	YBL041W	YPR022C	Q12139	1133 aa		4.83	□□□□□ -1.64
PRE7	YBL041W	RUD3	Q12234	484 aa	Known RBP	4.83	□□□□□ -1.64
PRE7	YBL041W	YPR011C	Q12251	326 aa		4.83	□□□□□ -1.64
PRE7	YBL041W	SRN2	Q99176	213 aa		4.83	□□□□□ -1.64
PRE7	YBL041W	HEM2	P05373	342 aa		4.82	□□□□□ -1.64
PRE7	YBL041W	HOM3	P10869	527 aa		4.82	□□□□□ -1.64
PRE7	YBL041W	URA4	P20051	364 aa		4.82	□□□□□ -1.64
PRE7	YBL041W	YCR090C	P25654	182 aa	Known RBP	4.82	□□□□□ -1.64
PRE7	YBL041W	HXT4	P32467	576 aa		4.82	□□□□□ -1.64
PRE7	YBL041W	PPZ2	P33329	710 aa		4.82	□□□□□ -1.64
PRE7	YBL041W	KKQ8	P36004	724 aa		4.82	□□□□□ -1.64
PRE7	YBL041W	SET3	P36124	751 aa		4.82	□□□□□ -1.64
PRE7	YBL041W	FTH1	P38310	465 aa		4.82	□□□□□ -1.64
PRE7	YBL041W	MNL1	P38888	796 aa		4.82	□□□□□ -1.64
PRE7	YBL041W	HXT6	P39003	570 aa	Known RBP	4.82	□□□□□ -1.64
PRE7	YBL041W	HXT7	P39004	570 aa		4.82	□□□□□ -1.64
PRE7	YBL041W	PZF1	P39933	429 aa		4.82	□□□□□ -1.64
PRE7	YBL041W	YRB1	P41920	201 aa	Known RBP	4.82	□□□□□ -1.64
PRE7	YBL041W	URB2	P47108	1174 aa		4.82	□□□□□ -1.64
PRE7	YBL041W	PRP31	P49704	494 aa	Predicted RBP	4.82	□□□□□ -1.64
PRE7	YBL041W	TRM9	P49957	279 aa		4.82	□□□□□ -1.64
PRE7	YBL041W	EFM5	P53200	248 aa	Known RBP	4.82	□□□□□ -1.64
PRE7	YBL041W	BIO4	P53630	237 aa		4.82	□□□□□ -1.64
PRE7	YBL041W	MRS2	Q01926	470 aa		4.82	□□□□□ -1.64
PRE7	YBL041W	RMI1	Q02685	241 aa		4.82	□□□□□ -1.64
PRE7	YBL041W	YPL247C	Q12523	523 aa		4.82	□□□□□ -1.64
PRE7	YBL041W	YBR056W-A	I2HB52	66 aa		4.81	□□□□□ -1.64
PRE7	YBL041W	SPT3	P06844	337 aa		4.81	□□□□□ -1.64
PRE7	YBL041W	RPS21A	P0C0V8	87 aa	Known RBP	4.81	□□□□□ -1.64
PRE7	YBL041W	ILV6	P25605	309 aa	Known RBP	4.81	□□□□□ -1.64
PRE7	YBL041W	ARE1	P25628	610 aa		4.81	□□□□□ -1.64
PRE7	YBL041W	UGP1	P32861	499 aa	Known RBP	4.81	□□□□□ -1.64
PRE7	YBL041W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
PRE7	YBL041W	ASK1	P35734	292 aa		4.81	□□□□□ -1.64
PRE7	YBL041W	RMA1	P36001	430 aa	Known RBP	4.81	□□□□□ -1.64
PRE7	YBL041W	RIX1	P38883	763 aa	Predicted RBP	4.81	□□□□□ -1.64
PRE7	YBL041W	YHR210C	P38893	341 aa		4.81	□□□□□ -1.64
PRE7	YBL041W	MET30	P39014	640 aa		4.81	□□□□□ -1.64
PRE7	YBL041W	YJL206C	P39529	758 aa		4.81	□□□□□ -1.64
PRE7	YBL041W	APQ12	P40532	138 aa		4.81	□□□□□ -1.64
PRE7	YBL041W	AXL1	P40851	1208 aa		4.81	□□□□□ -1.64
PRE7	YBL041W	UBP6	P43593	499 aa	Known RBP	4.81	□□□□□ -1.64
PRE7	YBL041W	IBA57	P47158	497 aa		4.81	□□□□□ -1.64
PRE7	YBL041W	IST1	P53843	298 aa	Predicted RBP	4.81	□□□□□ -1.64
PRE7	YBL041W	GIP3	Q03016	1276 aa		4.81	□□□□□ -1.64
PRE7	YBL041W	RAD34	Q06665	692 aa		4.81	□□□□□ -1.64
PRE7	YBL041W	TEN1	Q07921	160 aa		4.81	□□□□□ -1.64
PRE7	YBL041W	YOL019W	Q08157	551 aa		4.81	□□□□□ -1.64
PRE7	YBL041W	YLR053C	Q12026	108 aa		4.81	□□□□□ -1.64
PRE7	YBL041W	YPL245W	Q12179	454 aa	Known RBP	4.81	□□□□□ -1.64
PRE7	YBL041W	AHA1	Q12449	350 aa	Known RBP	4.81	□□□□□ -1.64
PRE7	YBL041W	GUK1	P15454	187 aa	Known RBP	4.8	□□□□□ -1.64
PRE7	YBL041W	SPS22	P25380	463 aa		4.8	□□□□□ -1.64
PRE7	YBL041W	YHB1	P39676	399 aa	Known RBP	4.8	□□□□□ -1.64
PRE7	YBL041W	VRG4	P40107	337 aa		4.8	□□□□□ -1.64
PRE7	YBL041W	AZF1	P41696	914 aa		4.8	□□□□□ -1.64
PRE7	YBL041W	HOC1	P47124	396 aa		4.8	□□□□□ -1.64
PRE7	YBL041W	NIT3	P49954	291 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms