RNA–Protein interactions for RNA: YBL005W-A

YBL005W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YBL005W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBL005W-AYBL005W-A CPR2P23285 205 aa3.13□□□□□ -1.91
YBL005W-AYBL005W-A PUT3P25502 979 aaPredicted RBP3.13□□□□□ -1.91
YBL005W-AYBL005W-A CRM1P30822 1084 aaKnown RBP3.13□□□□□ -1.91
YBL005W-AYBL005W-A TFB1P32776 642 aa3.13□□□□□ -1.91
YBL005W-AYBL005W-A FRE2P36033 711 aa3.13□□□□□ -1.91
YBL005W-AYBL005W-A NTC20P38302 140 aaPredicted RBP3.13□□□□□ -1.91
YBL005W-AYBL005W-A YHR218WP38899 603 aa3.13□□□□□ -1.91
YBL005W-AYBL005W-A KRE9P39005 276 aa3.13□□□□□ -1.91
YBL005W-AYBL005W-A ZIM17P42844 174 aa3.13□□□□□ -1.91
YBL005W-AYBL005W-A CAK1P43568 368 aaPredicted RBP3.13□□□□□ -1.91
YBL005W-AYBL005W-A COS5P47187 383 aa3.13□□□□□ -1.91
YBL005W-AYBL005W-A TCB2P48231 1178 aa3.13□□□□□ -1.91
YBL005W-AYBL005W-A YGL138CP53122 345 aa3.13□□□□□ -1.91
YBL005W-AYBL005W-A NCS2P53923 493 aaPredicted RBP3.13□□□□□ -1.91
YBL005W-AYBL005W-A SXM1Q04175 944 aaKnown RBP3.13□□□□□ -1.91
YBL005W-AYBL005W-A COS7Q07788 383 aa3.13□□□□□ -1.91
YBL005W-AYBL005W-A CTF3Q12748 733 aa3.13□□□□□ -1.91
YBL005W-AYBL005W-A ERV1P27882 189 aa3.12□□□□□ -1.91
YBL005W-AYBL005W-A AGA1P32323 725 aa3.12□□□□□ -1.91
YBL005W-AYBL005W-A BLI1P35727 113 aa3.12□□□□□ -1.91
YBL005W-AYBL005W-A APE3P37302 537 aaKnown RBP3.12□□□□□ -1.91
YBL005W-AYBL005W-A ISC1P40015 477 aaKnown RBP3.12□□□□□ -1.91
YBL005W-AYBL005W-A TFG2P41896 400 aaPredicted RBP3.12□□□□□ -1.91
YBL005W-AYBL005W-A BUD27P43573 796 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
YBL005W-AYBL005W-A ART5P53244 586 aaKnown RBP3.12□□□□□ -1.91
YBL005W-AYBL005W-A DOP1Q03921 1698 aa3.11□□□□□ -1.91
YBL005W-AYBL005W-A RIP1P08067 215 aa3.11□□□□□ -1.91
YBL005W-AYBL005W-A ARO1P08566 1588 aaKnown RBP3.11□□□□□ -1.91
YBL005W-AYBL005W-A CDC60P26637 1090 aaKnown RBP3.11□□□□□ -1.91
YBL005W-AYBL005W-A NDI1P32340 513 aa3.11□□□□□ -1.91
YBL005W-AYBL005W-A NIP100P33420 868 aa3.11□□□□□ -1.91
YBL005W-AYBL005W-A ARA1P38115 344 aa3.11□□□□□ -1.91
YBL005W-AYBL005W-A VHC1P38329 1120 aa3.11□□□□□ -1.91
YBL005W-AYBL005W-A RRT2P38332 387 aa3.11□□□□□ -1.91
YBL005W-AYBL005W-A TIF5P38431 405 aaKnown RBP3.11□□□□□ -1.91
YBL005W-AYBL005W-A YAP3P38749 330 aa3.11□□□□□ -1.91
YBL005W-AYBL005W-A MSO1P53604 210 aaKnown RBP3.11□□□□□ -1.91
YBL005W-AYBL005W-A CAF40P53829 373 aa3.11□□□□□ -1.91
YBL005W-AYBL005W-A BOR1P53838 576 aa3.11□□□□□ -1.91
YBL005W-AYBL005W-A PNG1Q02890 363 aa3.11□□□□□ -1.91
YBL005W-AYBL005W-A RCF1Q03713 159 aa3.11□□□□□ -1.91
YBL005W-AYBL005W-A HNT3Q08702 217 aa3.11□□□□□ -1.91
YBL005W-AYBL005W-A HSP42Q12329 375 aa3.11□□□□□ -1.91
YBL005W-AYBL005W-A PMR1P13586 950 aa3.1□□□□□ -1.91
YBL005W-AYBL005W-A CBS2P14905 389 aa3.1□□□□□ -1.91
YBL005W-AYBL005W-A YCR100CP25606 316 aa3.1□□□□□ -1.91
YBL005W-AYBL005W-A KRE2P27809 442 aa3.1□□□□□ -1.91
YBL005W-AYBL005W-A PRP21P32524 280 aaPredicted RBP3.1□□□□□ -1.91
YBL005W-AYBL005W-A SLM4P38247 162 aa3.1□□□□□ -1.91
YBL005W-AYBL005W-A CCT2P39076 527 aaKnown RBP3.1□□□□□ -1.91
YBL005W-AYBL005W-A AVT4P50944 713 aa3.1□□□□□ -1.91
YBL005W-AYBL005W-A WSC2P53832 503 aa3.1□□□□□ -1.91
YBL005W-AYBL005W-A GIS2P53849 153 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
YBL005W-AYBL005W-A ARK1P53974 638 aa3.1□□□□□ -1.91
YBL005W-AYBL005W-A ODC1Q03028 310 aa3.1□□□□□ -1.91
YBL005W-AYBL005W-A PIR3Q03180 325 aa3.1□□□□□ -1.91
YBL005W-AYBL005W-A HOT1Q03213 719 aa3.1□□□□□ -1.91
YBL005W-AYBL005W-A VAM3Q12241 283 aa3.1□□□□□ -1.91
YBL005W-AYBL005W-A YLR278CQ05854 1341 aa3.09□□□□□ -1.91
YBL005W-AYBL005W-A YBT1P32386 1661 aa3.09□□□□□ -1.91
YBL005W-AYBL005W-A YSP2Q06681 1438 aa3.09□□□□□ -1.91
YBL005W-AYBL005W-A TY3B-GQ99315 1547 aa3.09□□□□□ -1.91
YBL005W-AYBL005W-A HIP1P06775 603 aa3.09□□□□□ -1.91
YBL005W-AYBL005W-A YAR066WP0CX18 203 aa3.09□□□□□ -1.91
YBL005W-AYBL005W-A YHR214WP0CX19 203 aa3.09□□□□□ -1.91
YBL005W-AYBL005W-A SRV2P17555 526 aaKnown RBP3.09□□□□□ -1.91
YBL005W-AYBL005W-A RNA14P25298 677 aaKnown RBP3.09□□□□□ -1.91
YBL005W-AYBL005W-A GEX1P25596 615 aa3.09□□□□□ -1.91
YBL005W-AYBL005W-A SIN4P32259 974 aa3.09□□□□□ -1.91
YBL005W-AYBL005W-A HIR2P32480 875 aa3.09□□□□□ -1.91
YBL005W-AYBL005W-A GLC7P32598 312 aaKnown RBP3.09□□□□□ -1.91
YBL005W-AYBL005W-A JEM1P40358 645 aa3.09□□□□□ -1.91
YBL005W-AYBL005W-A GCD10P41814 478 aa3.09□□□□□ -1.91
YBL005W-AYBL005W-A PCP1P53259 346 aa3.09□□□□□ -1.91
YBL005W-AYBL005W-A RPT4P53549 437 aaKnown RBP3.09□□□□□ -1.91
YBL005W-AYBL005W-A YIF1P53845 314 aaKnown RBP3.09□□□□□ -1.91
YBL005W-AYBL005W-A DSL1P53847 754 aa3.09□□□□□ -1.91
YBL005W-AYBL005W-A ACL4Q03771 387 aa3.09□□□□□ -1.91
YBL005W-AYBL005W-A YDR387CQ04162 555 aa3.09□□□□□ -1.91
YBL005W-AYBL005W-A HSP31Q04432 237 aa3.09□□□□□ -1.91
YBL005W-AYBL005W-A MED2Q12124 431 aa3.09□□□□□ -1.91
YBL005W-AYBL005W-A BNI1P41832 1953 aa3.08□□□□□ -1.92
YBL005W-AYBL005W-A CPR1P14832 162 aaKnown RBP3.08□□□□□ -1.92
YBL005W-AYBL005W-A SEC63P14906 663 aa3.08□□□□□ -1.92
YBL005W-AYBL005W-A URA4P20051 364 aa3.08□□□□□ -1.92
YBL005W-AYBL005W-A BRF1P29056 596 aa3.08□□□□□ -1.92
YBL005W-AYBL005W-A MRP4P32902 394 aa3.08□□□□□ -1.92
YBL005W-AYBL005W-A LTV1P34078 463 aa3.08□□□□□ -1.92
YBL005W-AYBL005W-A YCR041WP37265 110 aa3.08□□□□□ -1.92
YBL005W-AYBL005W-A RFC3P38629 340 aa3.08□□□□□ -1.92
YBL005W-AYBL005W-A RPS0BP46654 252 aaKnown RBP3.08□□□□□ -1.92
YBL005W-AYBL005W-A TRS85P46944 698 aa3.08□□□□□ -1.92
YBL005W-AYBL005W-A SSN8P47821 323 aa3.08□□□□□ -1.92
YBL005W-AYBL005W-A TOM22P49334 152 aa3.08□□□□□ -1.92
YBL005W-AYBL005W-A POP6P53218 158 aa3.08□□□□□ -1.92
YBL005W-AYBL005W-A OAZ1Q02803 292 aa3.08□□□□□ -1.92
YBL005W-AYBL005W-A YMR130WQ04223 302 aa3.08□□□□□ -1.92
YBL005W-AYBL005W-A MMR1Q06324 491 aa3.08□□□□□ -1.92
YBL005W-AYBL005W-A RKM1Q08961 583 aaPredicted RBP3.08□□□□□ -1.92
YBL005W-AYBL005W-A YLL056CQ12177 298 aa3.08□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms