RNA–Protein interactions for RNA: YAR009C

YAR009C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YAR009C, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YAR009CYAR009C RLM1Q12224 676 aa1.26□□□□□ -2.21
YAR009CYAR009C HIF1Q12373 385 aa1.26□□□□□ -2.21
YAR009CYAR009C UTP20P35194 2493 aaKnown RBP1.25□□□□□ -2.21
YAR009CYAR009C FOB1O13329 566 aa1.25□□□□□ -2.21
YAR009CYAR009C CAR1P00812 333 aaKnown RBP1.25□□□□□ -2.21
YAR009CYAR009C GAL80P04387 435 aa1.25□□□□□ -2.21
YAR009CYAR009C DFR1P07807 211 aaKnown RBP RIP-Chip data1.25□□□□□ -2.21not detected
YAR009CYAR009C PAP1P29468 568 aaKnown RBP1.25□□□□□ -2.21
YAR009CYAR009C SHP1P34223 423 aa1.25□□□□□ -2.21
YAR009CYAR009C YBR225WP38321 900 aa1.25□□□□□ -2.21
YAR009CYAR009C SGN1P40561 250 aaKnown RBP RIP-Chip data1.25□□□□□ -2.21not detected
YAR009CYAR009C MNP1P53163 194 aaPredicted RBP1.25□□□□□ -2.21
YAR009CYAR009C RRN11Q04712 507 aa1.25□□□□□ -2.21
YAR009CYAR009C THP1Q08231 455 aa1.25□□□□□ -2.21
YAR009CYAR009C RRI2Q12348 645 aa1.25□□□□□ -2.21
YAR009CYAR009C RAD52P06778 471 aaKnown RBP1.25□□□□□ -2.21
YAR009CYAR009C PHO2P07269 559 aa1.25□□□□□ -2.21
YAR009CYAR009C OCA4P25366 362 aa1.25□□□□□ -2.21
YAR009CYAR009C PTR2P32901 601 aa1.25□□□□□ -2.21
YAR009CYAR009C SRO77P38163 1010 aa1.25□□□□□ -2.21
YAR009CYAR009C MDM31P38880 579 aa1.25□□□□□ -2.21
YAR009CYAR009C NOP13P53883 403 aaKnown RBP RIP-Chip data1.25□□□□□ -2.21not detected
YAR009CYAR009C VAC7P53950 1165 aa1.25□□□□□ -2.21
YAR009CYAR009C YDR131CQ03899 556 aa1.25□□□□□ -2.21
YAR009CYAR009C YMR087WQ04299 284 aa1.25□□□□□ -2.21
YAR009CYAR009C CSI1Q04368 295 aa1.25□□□□□ -2.21
YAR009CYAR009C YOR365CQ08844 703 aa1.25□□□□□ -2.21
YAR009CYAR009C MED1Q12321 566 aa1.25□□□□□ -2.21
YAR009CYAR009C INH1P01097 85 aa1.24□□□□□ -2.21
YAR009CYAR009C PEP4P07267 405 aaKnown RBP1.24□□□□□ -2.21
YAR009CYAR009C SSA3P09435 649 aaKnown RBP1.24□□□□□ -2.21
YAR009CYAR009C MET8P15807 274 aa1.24□□□□□ -2.21
YAR009CYAR009C MAK31P23059 88 aa1.24□□□□□ -2.21
YAR009CYAR009C PHO84P25297 587 aaKnown RBP1.24□□□□□ -2.21
YAR009CYAR009C NDC1P32500 655 aa1.24□□□□□ -2.21
YAR009CYAR009C ANP1P32629 500 aa1.24□□□□□ -2.21
YAR009CYAR009C SIP2P34164 415 aaKnown RBP1.24□□□□□ -2.21
YAR009CYAR009C YKL097CP34245 136 aa1.24□□□□□ -2.21
YAR009CYAR009C BNA4P38169 460 aa1.24□□□□□ -2.21
YAR009CYAR009C SPO22P40511 975 aa1.24□□□□□ -2.21
YAR009CYAR009C ARE2P53629 642 aaKnown RBP1.24□□□□□ -2.21
YAR009CYAR009C RPM2Q02773 1202 aa1.24□□□□□ -2.21
YAR009CYAR009C ERV41Q04651 352 aa1.24□□□□□ -2.21
YAR009CYAR009C IVY1Q04934 453 aa1.24□□□□□ -2.21
YAR009CYAR009C BRR1Q99177 341 aaPredicted RBP1.24□□□□□ -2.21
YAR009CYAR009C CSF1Q12150 2958 aa1.24□□□□□ -2.21
YAR009CYAR009C IRA2P19158 3079 aa1.24□□□□□ -2.21
YAR009CYAR009C SEC16P48415 2195 aaKnown RBP1.24□□□□□ -2.21
YAR009CYAR009C HIP1P06775 603 aa1.24□□□□□ -2.21
YAR009CYAR009C MRS3P10566 314 aa1.24□□□□□ -2.21
YAR009CYAR009C EXO70P19658 623 aa1.24□□□□□ -2.21
YAR009CYAR009C SGV1P23293 657 aaKnown RBP1.24□□□□□ -2.21
YAR009CYAR009C WBP1P33767 430 aaKnown RBP1.24□□□□□ -2.21
YAR009CYAR009C TCM62P38228 572 aaKnown RBP1.24□□□□□ -2.21
YAR009CYAR009C NAB3P38996 802 aaKnown RBP RIP-Chip data1.24□□□□□ -2.21not detected
YAR009CYAR009C VPS52P39904 641 aa1.24□□□□□ -2.21
YAR009CYAR009C ARF3P40994 183 aaRIP-Chip data1.24□□□□□ -2.21not detected
YAR009CYAR009C SCD6P45978 349 aaKnown RBP RIP-Chip data1.24□□□□□ -2.21not detected
YAR009CYAR009C RTT101P47050 842 aa1.24□□□□□ -2.21
YAR009CYAR009C YDR239CQ03780 787 aa1.24□□□□□ -2.21
YAR009CYAR009C RPC11Q04307 110 aaPredicted RBP1.24□□□□□ -2.21
YAR009CYAR009C MRPL51Q06090 140 aaPredicted RBP1.24□□□□□ -2.21
YAR009CYAR009C SYO1Q07395 620 aa1.24□□□□□ -2.21
YAR009CYAR009C PPT2Q12036 173 aa1.24□□□□□ -2.21
YAR009CYAR009C YMR230W-AQ3E7B5 62 aa1.24□□□□□ -2.21
YAR009CYAR009C HSC82P15108 705 aaKnown RBP1.24□□□□□ -2.21
YAR009CYAR009C COT1P32798 439 aa1.24□□□□□ -2.21
YAR009CYAR009C MRE11P32829 692 aa1.24□□□□□ -2.21
YAR009CYAR009C DUG2P38149 878 aa1.24□□□□□ -2.21
YAR009CYAR009C DHH1P39517 506 aaKnown RBP1.24□□□□□ -2.21
YAR009CYAR009C TRF5P48561 642 aaKnown RBP1.24□□□□□ -2.21
YAR009CYAR009C DRN1P53255 507 aaKnown RBP1.24□□□□□ -2.21
YAR009CYAR009C ZPR1P53303 486 aaKnown RBP1.24□□□□□ -2.21
YAR009CYAR009C SLD5Q03406 294 aa1.24□□□□□ -2.21
YAR009CYAR009C RTT103Q05543 409 aa1.24□□□□□ -2.21
YAR009CYAR009C DON1Q05610 365 aa1.24□□□□□ -2.21
YAR009CYAR009C YTH1Q06102 208 aaPredicted RBP1.24□□□□□ -2.21
YAR009CYAR009C PHO92Q06390 306 aa1.24□□□□□ -2.21
YAR009CYAR009C YDL009CQ12210 107 aa1.24□□□□□ -2.21
YAR009CYAR009C SET6Q12529 373 aa1.24□□□□□ -2.21
YAR009CYAR009C SUC2P00724 532 aa1.23□□□□□ -2.21
YAR009CYAR009C COR1P07256 457 aa1.23□□□□□ -2.21
YAR009CYAR009C YCR007CP25354 239 aa1.23□□□□□ -2.21
YAR009CYAR009C GPI10P30777 616 aa1.23□□□□□ -2.21
YAR009CYAR009C PFS1P38872 237 aa1.23□□□□□ -2.21
YAR009CYAR009C GAA1P39012 614 aa1.23□□□□□ -2.21
YAR009CYAR009C MBB1P39534 108 aa1.23□□□□□ -2.21
YAR009CYAR009C RPH1P39956 796 aa1.23□□□□□ -2.21
YAR009CYAR009C MET28P40573 187 aa1.23□□□□□ -2.21
YAR009CYAR009C FYV8P46949 817 aaKnown RBP1.23□□□□□ -2.21
YAR009CYAR009C AIM23P47015 356 aa1.23□□□□□ -2.21
YAR009CYAR009C PET130P47065 347 aa1.23□□□□□ -2.21
YAR009CYAR009C SUR7P54003 302 aa1.23□□□□□ -2.21
YAR009CYAR009C IRC15Q02733 499 aa1.23□□□□□ -2.21
YAR009CYAR009C RLI1Q03195 608 aaKnown RBP1.23□□□□□ -2.21
YAR009CYAR009C YDR341CQ05506 607 aaKnown RBP1.23□□□□□ -2.21
YAR009CYAR009C GRX8Q05926 109 aa1.23□□□□□ -2.21
YAR009CYAR009C VPS74Q06385 345 aa1.23□□□□□ -2.21
YAR009CYAR009C DNL4Q08387 944 aaPredicted RBP1.23□□□□□ -2.21
YAR009CYAR009C PLP2Q12017 286 aa1.23□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 66.6 ms