RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C APN1P22936 367 aa2.25□□□□□ -2.05
CLN3YAL040C YCK1P23291 538 aa2.25□□□□□ -2.05
CLN3YAL040C PRP28P23394 588 aa2.25□□□□□ -2.05
CLN3YAL040C AAT2P23542 418 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C RBK1P25332 333 aa2.25□□□□□ -2.05
CLN3YAL040C CDC10P25342 322 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C RPC19P28000 142 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C NDI1P32340 513 aa2.25□□□□□ -2.05
CLN3YAL040C PDB1P32473 366 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C NIP1P32497 812 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C SMI1P32566 505 aa2.25□□□□□ -2.05
CLN3YAL040C YPT7P32939 208 aa2.25□□□□□ -2.05
CLN3YAL040C RIB7P33312 244 aa2.25□□□□□ -2.05
CLN3YAL040C ASK1P35734 292 aa2.25□□□□□ -2.05
CLN3YAL040C RMA1P36001 430 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C RIM2P38127 377 aa2.25□□□□□ -2.05
CLN3YAL040C YBL029WP38201 376 aa2.25□□□□□ -2.05
CLN3YAL040C CDS1P38221 457 aa2.25□□□□□ -2.05
CLN3YAL040C YBR259WP38338 688 aa2.25□□□□□ -2.05
CLN3YAL040C RFC3P38629 340 aa2.25□□□□□ -2.05
CLN3YAL040C STB5P38699 743 aa2.25□□□□□ -2.05
CLN3YAL040C GND1P38720 489 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C NUP60P39705 539 aa2.25□□□□□ -2.05
CLN3YAL040C YEL057CP39983 233 aa2.25□□□□□ -2.05
CLN3YAL040C BTT1P40314 149 aaPredicted RBP2.25□□□□□ -2.05
CLN3YAL040C PAN6P40459 309 aa2.25□□□□□ -2.05
CLN3YAL040C NAS2P40555 220 aa2.25□□□□□ -2.05
CLN3YAL040C MET28P40573 187 aa2.25□□□□□ -2.05
CLN3YAL040C UFE1P41834 346 aa2.25□□□□□ -2.05
CLN3YAL040C DLD2P46681 530 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C YJL132WP47014 750 aa2.25□□□□□ -2.05
CLN3YAL040C RTT101P47050 842 aa2.25□□□□□ -2.05
CLN3YAL040C NOP9P47077 666 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C VPS25P47142 202 aa2.25□□□□□ -2.05
CLN3YAL040C PRP24P49960 444 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C AIF1P52923 378 aa2.25□□□□□ -2.05
CLN3YAL040C ART5P53244 586 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C LSC1P53598 329 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C SNF12P53628 566 aa2.25□□□□□ -2.05
CLN3YAL040C ENT5Q03769 411 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C INP2Q03824 705 aa2.25□□□□□ -2.05
CLN3YAL040C HMO1Q03973 246 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C RNH1Q04740 348 aa2.25□□□□□ -2.05
CLN3YAL040C GRX8Q05926 109 aa2.25□□□□□ -2.05
CLN3YAL040C ARO10Q06408 635 aa2.25□□□□□ -2.05
CLN3YAL040C NDD1Q08887 554 aa2.25□□□□□ -2.05
CLN3YAL040C UBX3Q12229 455 aa2.25□□□□□ -2.05
CLN3YAL040C AHC1Q12433 566 aa2.25□□□□□ -2.05
CLN3YAL040C SPE4Q12455 300 aa2.25□□□□□ -2.05
CLN3YAL040C RMD5Q12508 421 aa2.25□□□□□ -2.05
CLN3YAL040C YPL247CQ12523 523 aa2.25□□□□□ -2.05
CLN3YAL040C YPT6Q99260 215 aa2.25□□□□□ -2.05
CLN3YAL040C VCX1Q99385 411 aa2.25□□□□□ -2.05
CLN3YAL040C STE2D6VTK4 431 aa2.24□□□□□ -2.05
CLN3YAL040C DFR1P07807 211 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
CLN3YAL040C HMG2P12684 1045 aa2.24□□□□□ -2.05
CLN3YAL040C FRS1P15624 595 aaKnown RBP2.24□□□□□ -2.05
CLN3YAL040C ART10P18634 518 aaKnown RBP2.24□□□□□ -2.05
CLN3YAL040C ARF2P19146 181 aaKnown RBP2.24□□□□□ -2.05
CLN3YAL040C KGD2P19262 463 aaPredicted RBP2.24□□□□□ -2.05
CLN3YAL040C CPR2P23285 205 aa2.24□□□□□ -2.05
CLN3YAL040C PPH22P23595 377 aa2.24□□□□□ -2.05
CLN3YAL040C YCR099CP25657 155 aa2.24□□□□□ -2.05
CLN3YAL040C MRPL9P31334 269 aa2.24□□□□□ -2.05
CLN3YAL040C KAR9P32526 644 aa2.24□□□□□ -2.05
CLN3YAL040C DAD2P36162 133 aa2.24□□□□□ -2.05
CLN3YAL040C SRO77P38163 1010 aa2.24□□□□□ -2.05
CLN3YAL040C ATG12P38316 186 aa2.24□□□□□ -2.05
CLN3YAL040C REV7P38927 245 aa2.24□□□□□ -2.05
CLN3YAL040C PSD1P39006 500 aa2.24□□□□□ -2.05
CLN3YAL040C TIM17P39515 158 aa2.24□□□□□ -2.05
CLN3YAL040C SEO1P39709 593 aa2.24□□□□□ -2.05
CLN3YAL040C RGI2P40188 164 aa2.24□□□□□ -2.05
CLN3YAL040C BUD8P41698 603 aa2.24□□□□□ -2.05
CLN3YAL040C SSU1P41930 458 aa2.24□□□□□ -2.05
CLN3YAL040C FAR3P46671 204 aa2.24□□□□□ -2.05
CLN3YAL040C MTR3P48240 250 aaPredicted RBP2.24□□□□□ -2.05
CLN3YAL040C UBC11P52492 156 aa2.24□□□□□ -2.05
CLN3YAL040C TAF6P53040 516 aa2.24□□□□□ -2.05
CLN3YAL040C VEL1P53058 206 aa2.24□□□□□ -2.05
CLN3YAL040C COG1P53079 417 aa2.24□□□□□ -2.05
CLN3YAL040C STR3P53101 465 aaKnown RBP2.24□□□□□ -2.05
CLN3YAL040C FRE4P53746 719 aa2.24□□□□□ -2.05
CLN3YAL040C PRO2P54885 456 aaKnown RBP2.24□□□□□ -2.05
CLN3YAL040C SMX3P54999 86 aaPredicted RBP2.24□□□□□ -2.05
CLN3YAL040C OSH6Q02201 448 aa2.24□□□□□ -2.05
CLN3YAL040C NUP100Q02629 959 aa2.24□□□□□ -2.05
CLN3YAL040C ATG21Q02887 496 aa2.24□□□□□ -2.05
CLN3YAL040C PIR1Q03178 341 aa2.24□□□□□ -2.05
CLN3YAL040C NGL2Q03264 515 aaKnown RBP2.24□□□□□ -2.05
CLN3YAL040C RAD30Q04049 632 aa2.24□□□□□ -2.05
CLN3YAL040C YET2Q04210 160 aa2.24□□□□□ -2.05
CLN3YAL040C YMR111CQ04461 462 aaPredicted RBP2.24□□□□□ -2.05
CLN3YAL040C GAD1Q04792 585 aa2.24□□□□□ -2.05
CLN3YAL040C CRN1Q06440 651 aa2.24□□□□□ -2.05
CLN3YAL040C SWA2Q06677 668 aa2.24□□□□□ -2.05
CLN3YAL040C DIA2Q08496 732 aaPredicted RBP2.24□□□□□ -2.05
CLN3YAL040C APC5Q08683 685 aa2.24□□□□□ -2.05
CLN3YAL040C SPE3Q12074 293 aaKnown RBP2.24□□□□□ -2.05
CLN3YAL040C RGS2Q99188 309 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 44.8 ms