RNA–Protein interactions for RNA: ENST00000636603.1

CHRNA7-217, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-217ENST00000636603 TMX1Q9H3N1 280 aa17.25■□□□□ 0.35
CHRNA7-217ENST00000636603 KCNMB3Q9NPA1 279 aa17.25■□□□□ 0.35
CHRNA7-217ENST00000636603 SERTAD1Q9UHV2 236 aa17.25■□□□□ 0.35
CHRNA7-217ENST00000636603 MSH4O15457 936 aa17.24■□□□□ 0.35
CHRNA7-217ENST00000636603 SLC10A3P09131 477 aa17.24■□□□□ 0.35
CHRNA7-217ENST00000636603 ARP10275 920 aa17.24■□□□□ 0.35
CHRNA7-217ENST00000636603 ITGB5P18084 799 aa17.24■□□□□ 0.35
CHRNA7-217ENST00000636603 SFPQP23246 707 aaKnown RBP eCLIP17.24■□□□□ 0.35
CHRNA7-217ENST00000636603 KARSQ15046 597 aaKnown RBP17.24■□□□□ 0.35
CHRNA7-217ENST00000636603 PTPN21Q16825 1174 aa17.24■□□□□ 0.35
CHRNA7-217ENST00000636603 MOXD1Q6UVY6 613 aa17.24■□□□□ 0.35
CHRNA7-217ENST00000636603 DHX58Q96C10 678 aa17.24■□□□□ 0.35
CHRNA7-217ENST00000636603 EHMT1Q9H9B1 1298 aa17.24■□□□□ 0.35
CHRNA7-217ENST00000636603 EFCC1Q9HA90 598 aa17.24■□□□□ 0.35
CHRNA7-217ENST00000636603 MAP3K20Q9NYL2 800 aaKnown RBP17.24■□□□□ 0.35
CHRNA7-217ENST00000636603 ZNF215Q9UL58 517 aaPredicted RBP17.24■□□□□ 0.35
CHRNA7-217ENST00000636603 UBASH3AP57075 661 aa17.23■□□□□ 0.35
CHRNA7-217ENST00000636603 CEP55Q53EZ4 464 aa17.23■□□□□ 0.35
CHRNA7-217ENST00000636603 VSTM4Q8IW00 320 aa17.23■□□□□ 0.35
CHRNA7-217ENST00000636603 GRAMD1CQ8IYS0 662 aa17.23■□□□□ 0.35
CHRNA7-217ENST00000636603 NAP1L4Q99733 375 aaKnown RBP17.23■□□□□ 0.35
CHRNA7-217ENST00000636603 PDCD2LQ9BRP1 358 aa17.23■□□□□ 0.35
CHRNA7-217ENST00000636603 WDR11Q9BZH6 1224 aa17.23■□□□□ 0.35
CHRNA7-217ENST00000636603 PKD2L1Q9P0L9 805 aa17.23■□□□□ 0.35
CHRNA7-217ENST00000636603 SLC45A1Q9Y2W3 748 aa17.23■□□□□ 0.35
CHRNA7-217ENST00000636603 ASTN1O14525 1302 aa17.23■□□□□ 0.35
CHRNA7-217ENST00000636603 TESPA1A2RU30 521 aaPredicted RBP17.23■□□□□ 0.35
CHRNA7-217ENST00000636603 ACTN4O43707 911 aaKnown RBP17.23■□□□□ 0.35
CHRNA7-217ENST00000636603 PGK2P07205 417 aa17.23■□□□□ 0.35
CHRNA7-217ENST00000636603 CYP4F22Q6NT55 531 aa17.23■□□□□ 0.35
CHRNA7-217ENST00000636603 TEX2Q8IWB9 1127 aa17.23■□□□□ 0.35
CHRNA7-217ENST00000636603 NUDT12Q9BQG2 462 aa17.23■□□□□ 0.35
CHRNA7-217ENST00000636603 PCDHA12Q9UN75 941 aa17.23■□□□□ 0.35
CHRNA7-217ENST00000636603 GOLGA8FQ08AF8 430 aa17.22■□□□□ 0.35
CHRNA7-217ENST00000636603 GOLGA8DPQ0D2H9 430 aa17.22■□□□□ 0.35
CHRNA7-217ENST00000636603 MORC3Q14149 939 aa17.22■□□□□ 0.35
CHRNA7-217ENST00000636603 POSTNQ15063 836 aa17.22■□□□□ 0.35
CHRNA7-217ENST00000636603 TMEM139Q8IV31 216 aa17.22■□□□□ 0.35
CHRNA7-217ENST00000636603 SAMD3Q8N6K7 520 aa17.22■□□□□ 0.35
CHRNA7-217ENST00000636603 IGSF22Q8N9C0 903 aa17.22■□□□□ 0.35
CHRNA7-217ENST00000636603 SPATA20Q8TB22 786 aa17.22■□□□□ 0.35
CHRNA7-217ENST00000636603 MXRA8Q9BRK3 442 aa17.22■□□□□ 0.35
CHRNA7-217ENST00000636603 MMTAG2Q9BU76 263 aaKnown RBP17.22■□□□□ 0.35
CHRNA7-217ENST00000636603 MEIS1O00470 390 aa17.21■□□□□ 0.35
CHRNA7-217ENST00000636603 ZNF18P17022 549 aa17.21■□□□□ 0.35
CHRNA7-217ENST00000636603 FXR2P51116 673 aaKnown RBP eCLIP17.21■□□□□ 0.35
CHRNA7-217ENST00000636603 CBX1P83916 185 aa17.21■□□□□ 0.35
CHRNA7-217ENST00000636603 PCNX4Q63HM2 1172 aa17.21■□□□□ 0.35
CHRNA7-217ENST00000636603 GPRC5AQ8NFJ5 357 aa17.21■□□□□ 0.35
CHRNA7-217ENST00000636603 LRRC15Q8TF66 581 aa17.21■□□□□ 0.35
CHRNA7-217ENST00000636603 LRWD1Q9UFC0 647 aa17.21■□□□□ 0.35
CHRNA7-217ENST00000636603 FBXO40Q9UH90 709 aa17.21■□□□□ 0.35
CHRNA7-217ENST00000636603 CPA4Q9UI42 421 aa17.21■□□□□ 0.35
CHRNA7-217ENST00000636603 FRMPD4Q14CM0 1322 aa17.21■□□□□ 0.35
CHRNA7-217ENST00000636603 ZNFX1Q9P2E3 1918 aaKnown RBP17.21■□□□□ 0.35
CHRNA7-217ENST00000636603 MANSC4A6NHS7 340 aaPredicted RBP17.21■□□□□ 0.35
CHRNA7-217ENST00000636603 FANCGO15287 622 aa17.21■□□□□ 0.35
CHRNA7-217ENST00000636603 SLC25A27O95847 323 aa17.21■□□□□ 0.35
CHRNA7-217ENST00000636603 NR3C2P08235 984 aa17.21■□□□□ 0.35
CHRNA7-217ENST00000636603 UBA7P41226 1012 aa17.21■□□□□ 0.35
CHRNA7-217ENST00000636603 TBX2Q13207 712 aaPredicted RBP17.21■□□□□ 0.35
CHRNA7-217ENST00000636603 SMAP1Q8IYB5 467 aaPredicted RBP17.21■□□□□ 0.35
CHRNA7-217ENST00000636603 KIF18AQ8NI77 898 aa17.21■□□□□ 0.35
CHRNA7-217ENST00000636603 STAMQ92783 540 aa17.21■□□□□ 0.35
CHRNA7-217ENST00000636603 L2HGDHQ9H9P8 463 aa17.21■□□□□ 0.35
CHRNA7-217ENST00000636603 SERPINC1P01008 464 aa17.2■□□□□ 0.34
CHRNA7-217ENST00000636603 CASP1P29466 404 aa17.2■□□□□ 0.34
CHRNA7-217ENST00000636603 C1QTNF8P60827 252 aa17.2■□□□□ 0.34
CHRNA7-217ENST00000636603 TMEM266Q2M3C6 531 aa17.2■□□□□ 0.34
CHRNA7-217ENST00000636603 CABP7Q86V35 215 aa17.2■□□□□ 0.34
CHRNA7-217ENST00000636603 NSUN6Q8TEA1 469 aaKnown RBP17.2■□□□□ 0.34
CHRNA7-217ENST00000636603 PARK7Q99497 189 aaKnown RBP17.2■□□□□ 0.34
CHRNA7-217ENST00000636603 UBIAD1Q9Y5Z9 338 aa17.2■□□□□ 0.34
CHRNA7-217ENST00000636603 SOWAHBA6NEL2 793 aa17.2■□□□□ 0.34
CHRNA7-217ENST00000636603 SPDYE4A6NLX3 237 aa17.2■□□□□ 0.34
CHRNA7-217ENST00000636603 APLP1P51693 650 aa17.2■□□□□ 0.34
CHRNA7-217ENST00000636603 IFNL1Q8IU54 200 aa17.2■□□□□ 0.34
CHRNA7-217ENST00000636603 RASSF8Q8NHQ8 419 aa17.2■□□□□ 0.34
CHRNA7-217ENST00000636603 KCNH7Q9NS40 1196 aa17.2■□□□□ 0.34
CHRNA7-217ENST00000636603 POTEB2H3BUK9 544 aa17.19■□□□□ 0.34
CHRNA7-217ENST00000636603 KIF2AO00139 706 aaPredicted RBP17.19■□□□□ 0.34
CHRNA7-217ENST00000636603 AFMP43652 599 aa17.19■□□□□ 0.34
CHRNA7-217ENST00000636603 SPIRE1Q08AE8 756 aa17.19■□□□□ 0.34
CHRNA7-217ENST00000636603 TAF1CQ15572 869 aaPredicted RBP17.19■□□□□ 0.34
CHRNA7-217ENST00000636603 E2F4Q16254 413 aa17.19■□□□□ 0.34
CHRNA7-217ENST00000636603 ECM1Q16610 540 aa17.19■□□□□ 0.34
CHRNA7-217ENST00000636603 HSP90AA4PQ58FG1 418 aa17.19■□□□□ 0.34
CHRNA7-217ENST00000636603 VSIG10LQ86VR7 867 aa17.19■□□□□ 0.34
CHRNA7-217ENST00000636603 SLFN12Q8IYM2 578 aa17.19■□□□□ 0.34
CHRNA7-217ENST00000636603 LRRN4CLQ8ND94 238 aa17.19■□□□□ 0.34
CHRNA7-217ENST00000636603 MMP19Q99542 508 aa17.19■□□□□ 0.34
CHRNA7-217ENST00000636603 ZNF577Q9BSK1 485 aa17.19■□□□□ 0.34
CHRNA7-217ENST00000636603 CCSER1Q9C0I3 900 aa17.19■□□□□ 0.34
CHRNA7-217ENST00000636603 PFASO15067 1338 aa17.19■□□□□ 0.34
CHRNA7-217ENST00000636603 DDX39AO00148 427 aaKnown RBP17.18■□□□□ 0.34
CHRNA7-217ENST00000636603 CBFA2T2O43439 604 aa17.18■□□□□ 0.34
CHRNA7-217ENST00000636603 PDIA5Q14554 519 aa17.18■□□□□ 0.34
CHRNA7-217ENST00000636603 DHX8Q14562 1220 aaKnown RBP17.18■□□□□ 0.34
CHRNA7-217ENST00000636603 NCAPH2Q6IBW4 605 aa17.18■□□□□ 0.34
CHRNA7-217ENST00000636603 TRIM65Q6PJ69 517 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms