RNA–Protein interactions for RNA: ENST00000620580.1

LINC00649-218, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 779 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-218ENST00000620580 CUL5Q93034 780 aa13.11□□□□□ -0.31
LINC00649-218ENST00000620580 EPOPA6NHQ4 379 aa13.1□□□□□ -0.31
LINC00649-218ENST00000620580 H3BRB1 525 aa13.1□□□□□ -0.31
LINC00649-218ENST00000620580 PIK3CDO00329 1044 aa13.1□□□□□ -0.31
LINC00649-218ENST00000620580 ATP9AO75110 1047 aa13.1□□□□□ -0.31
LINC00649-218ENST00000620580 EXOSC10Q01780 885 aaKnown RBP13.1□□□□□ -0.31
LINC00649-218ENST00000620580 RBL2Q08999 1139 aa13.1□□□□□ -0.31
LINC00649-218ENST00000620580 PTK7Q13308 1070 aa13.1□□□□□ -0.31
LINC00649-218ENST00000620580 GNPTABQ3T906 1256 aa13.1□□□□□ -0.31
LINC00649-218ENST00000620580 TRIM50Q86XT4 487 aa13.1□□□□□ -0.31
LINC00649-218ENST00000620580 HERC6Q8IVU3 1022 aa13.1□□□□□ -0.31
LINC00649-218ENST00000620580 NEK1Q96PY6 1258 aa13.1□□□□□ -0.31
LINC00649-218ENST00000620580 SLC9A7Q96T83 725 aa13.1□□□□□ -0.31
LINC00649-218ENST00000620580 GPR20Q99678 358 aa13.1□□□□□ -0.31
LINC00649-218ENST00000620580 OSBPL7Q9BZF2 842 aa13.1□□□□□ -0.31
LINC00649-218ENST00000620580 RNPEPQ9H4A4 650 aa13.1□□□□□ -0.31
LINC00649-218ENST00000620580 TUT1Q9H6E5 874 aaKnown RBP13.1□□□□□ -0.31
LINC00649-218ENST00000620580 PSTPIP2Q9H939 334 aa13.1□□□□□ -0.31
LINC00649-218ENST00000620580 BRPF3Q9ULD4 1205 aa13.1□□□□□ -0.31
LINC00649-218ENST00000620580 PTPRSQ13332 1948 aa13.09□□□□□ -0.31
LINC00649-218ENST00000620580 LCHNA4D1U4 455 aa13.09□□□□□ -0.31
LINC00649-218ENST00000620580 NOP56O00567 594 aaKnown RBP13.09□□□□□ -0.31
LINC00649-218ENST00000620580 TREHO43280 583 aa13.09□□□□□ -0.31
LINC00649-218ENST00000620580 FIBPO43427 364 aa13.09□□□□□ -0.31
LINC00649-218ENST00000620580 CXCL10P02778 98 aa13.09□□□□□ -0.31
LINC00649-218ENST00000620580 SMIM10L2AP0DMW4 78 aa13.09□□□□□ -0.31
LINC00649-218ENST00000620580 SMIM10L2BP0DMW5 78 aa13.09□□□□□ -0.31
LINC00649-218ENST00000620580 CALM1P0DP23 149 aa13.09□□□□□ -0.31
LINC00649-218ENST00000620580 CALM2P0DP24 149 aa13.09□□□□□ -0.31
LINC00649-218ENST00000620580 CALM3P0DP25 149 aa13.09□□□□□ -0.31
LINC00649-218ENST00000620580 CPA1P15085 419 aa13.09□□□□□ -0.31
LINC00649-218ENST00000620580 WDR5P61964 334 aaKnown RBP13.09□□□□□ -0.31
LINC00649-218ENST00000620580 DEFB103AP81534 67 aa13.09□□□□□ -0.31
LINC00649-218ENST00000620580 NEDD9Q14511 834 aa13.09□□□□□ -0.31
LINC00649-218ENST00000620580 UTP14CQ5TAP6 766 aaKnown RBP13.09□□□□□ -0.31
LINC00649-218ENST00000620580 PCNX4Q63HM2 1172 aa13.09□□□□□ -0.31
LINC00649-218ENST00000620580 TYW1BQ6NUM6 668 aa13.09□□□□□ -0.31
LINC00649-218ENST00000620580 METTL7BQ6UX53 244 aa13.09□□□□□ -0.31
LINC00649-218ENST00000620580 SGMS1Q86VZ5 419 aa13.09□□□□□ -0.31
LINC00649-218ENST00000620580 PHOSPHO2Q8TCD6 241 aa13.09□□□□□ -0.31
LINC00649-218ENST00000620580 SETD4Q9NVD3 440 aa13.09□□□□□ -0.31
LINC00649-218ENST00000620580 PKD2L1Q9P0L9 805 aa13.09□□□□□ -0.31
LINC00649-218ENST00000620580 NCOR1O75376 2440 aa13.09□□□□□ -0.31
LINC00649-218ENST00000620580 C17orf102A2RUQ5 167 aa13.08□□□□□ -0.32
LINC00649-218ENST00000620580 STAM2O75886 525 aa13.08□□□□□ -0.32
LINC00649-218ENST00000620580 ITGB5P18084 799 aa13.08□□□□□ -0.32
LINC00649-218ENST00000620580 THPOP40225 353 aa13.08□□□□□ -0.32
LINC00649-218ENST00000620580 TAP1Q03518 808 aa13.08□□□□□ -0.32
LINC00649-218ENST00000620580 RNF20Q5VTR2 975 aa13.08□□□□□ -0.32
LINC00649-218ENST00000620580 KRT40Q6A162 431 aa13.08□□□□□ -0.32
LINC00649-218ENST00000620580 WWC2Q6AWC2 1192 aa13.08□□□□□ -0.32
LINC00649-218ENST00000620580 APOA5Q6Q788 366 aa13.08□□□□□ -0.32
LINC00649-218ENST00000620580 HEATR3Q7Z4Q2 680 aa13.08□□□□□ -0.32
LINC00649-218ENST00000620580 SERINC5Q86VE9 423 aa13.08□□□□□ -0.32
LINC00649-218ENST00000620580 MICALL1Q8N3F8 863 aa13.08□□□□□ -0.32
LINC00649-218ENST00000620580 ATP6V0A1Q93050 837 aa13.08□□□□□ -0.32
LINC00649-218ENST00000620580 CNTNAP5Q8WYK1 1306 aa13.08□□□□□ -0.32
LINC00649-218ENST00000620580 REV3LO60673 3130 aa13.08□□□□□ -0.32
LINC00649-218ENST00000620580 TRANK1O15050 2925 aa13.07□□□□□ -0.32
LINC00649-218ENST00000620580 CDC45O75419 566 aa13.07□□□□□ -0.32
LINC00649-218ENST00000620580 BAIAP3O94812 1187 aa13.07□□□□□ -0.32
LINC00649-218ENST00000620580 KCNA2P16389 499 aa13.07□□□□□ -0.32
LINC00649-218ENST00000620580 HOXC8P31273 242 aa13.07□□□□□ -0.32
LINC00649-218ENST00000620580 KCNJ6P48051 423 aa13.07□□□□□ -0.32
LINC00649-218ENST00000620580 FUT2Q10981 343 aa13.07□□□□□ -0.32
LINC00649-218ENST00000620580 FAM117BQ6P1L5 589 aa13.07□□□□□ -0.32
LINC00649-218ENST00000620580 CNKSR3Q6P9H4 555 aa13.07□□□□□ -0.32
LINC00649-218ENST00000620580 DHX32Q7L7V1 743 aaKnown RBP13.07□□□□□ -0.32
LINC00649-218ENST00000620580 NLRX1Q86UT6 975 aa13.07□□□□□ -0.32
LINC00649-218ENST00000620580 ARNTL2Q8WYA1 636 aa13.07□□□□□ -0.32
LINC00649-218ENST00000620580 PGBD1Q96JS3 809 aa13.07□□□□□ -0.32
LINC00649-218ENST00000620580 SENP7Q9BQF6 1050 aa13.07□□□□□ -0.32
LINC00649-218ENST00000620580 USP26Q9BXU7 913 aa13.07□□□□□ -0.32
LINC00649-218ENST00000620580 FAM217BQ9NTX9 383 aaPredicted RBP13.07□□□□□ -0.32
LINC00649-218ENST00000620580 PCDHA6Q9UN73 950 aa13.07□□□□□ -0.32
LINC00649-218ENST00000620580 PCDHA8Q9Y5H6 950 aa13.07□□□□□ -0.32
LINC00649-218ENST00000620580 GSTTP1A0A1W2PQM5 241 aa13.06□□□□□ -0.32
LINC00649-218ENST00000620580 RSPH10B2B2RC85 870 aa13.06□□□□□ -0.32
LINC00649-218ENST00000620580 KIF28PB7ZC32 967 aa13.06□□□□□ -0.32
LINC00649-218ENST00000620580 ZBTB43O43298 467 aa13.06□□□□□ -0.32
LINC00649-218ENST00000620580 TLL1O43897 1013 aa13.06□□□□□ -0.32
LINC00649-218ENST00000620580 LGR5O75473 907 aa13.06□□□□□ -0.32
LINC00649-218ENST00000620580 CTSHP09668 335 aa13.06□□□□□ -0.32
LINC00649-218ENST00000620580 RSPH10BP0C881 870 aa13.06□□□□□ -0.32
LINC00649-218ENST00000620580 CDC27P30260 824 aa13.06□□□□□ -0.32
LINC00649-218ENST00000620580 RTN1Q16799 776 aa13.06□□□□□ -0.32
LINC00649-218ENST00000620580 TSGA10IPQ3SY00 556 aa13.06□□□□□ -0.32
LINC00649-218ENST00000620580 XRRA1Q6P2D8 792 aa13.06□□□□□ -0.32
LINC00649-218ENST00000620580 SYNE3Q6ZMZ3 975 aa13.06□□□□□ -0.32
LINC00649-218ENST00000620580 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.06□□□□□ -0.32
LINC00649-218ENST00000620580 DBF4BQ8NFT6 615 aa13.06□□□□□ -0.32
LINC00649-218ENST00000620580 CYP2W1Q8TAV3 490 aa13.06□□□□□ -0.32
LINC00649-218ENST00000620580 UBIAD1Q9Y5Z9 338 aa13.06□□□□□ -0.32
LINC00649-218ENST00000620580 V9GY48 417 aaPredicted RBP13.06□□□□□ -0.32
LINC00649-218ENST00000620580 KAT6AQ92794 2004 aa13.06□□□□□ -0.32
LINC00649-218ENST00000620580 BRWD1Q9NSI6 2320 aa13.05□□□□□ -0.32
LINC00649-218ENST00000620580 KLF18A0A0U1RQI7 1052 aa13.05□□□□□ -0.32
LINC00649-218ENST00000620580 SPDYE3A6NKU9 549 aa13.05□□□□□ -0.32
LINC00649-218ENST00000620580 PARNO95453 639 aaKnown RBP13.05□□□□□ -0.32
LINC00649-218ENST00000620580 TCF7P36402 384 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms