RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 CENPQQ7L2Z9 268 aaPredicted RBP17.04■□□□□ 0.32
PNKP-202ENST00000593706 SKAP1Q86WV1 359 aa17.04■□□□□ 0.32
PNKP-202ENST00000593706 GPKOWQ92917 476 aaPredicted RBP eCLIP17.04■□□□□ 0.32
PNKP-202ENST00000593706 C16orf70Q9BSU1 422 aa17.04■□□□□ 0.32
PNKP-202ENST00000593706 TUT1Q9H6E5 874 aaKnown RBP17.04■□□□□ 0.32
PNKP-202ENST00000593706 SUGCTQ9HAC7 445 aa17.04■□□□□ 0.32
PNKP-202ENST00000593706 INSL6Q9Y581 213 aa17.04■□□□□ 0.32
PNKP-202ENST00000593706 U3KPZ7 1027 aaPredicted RBP17.04■□□□□ 0.32
PNKP-202ENST00000593706 RBAK-RBAKDNI3L0D1 243 aa17.03■□□□□ 0.32
PNKP-202ENST00000593706 CTSHP09668 335 aa17.03■□□□□ 0.32
PNKP-202ENST00000593706 PTH1RQ03431 593 aa17.03■□□□□ 0.32
PNKP-202ENST00000593706 HIC1Q14526 733 aa17.03■□□□□ 0.32
PNKP-202ENST00000593706 WTAPQ15007 396 aa17.03■□□□□ 0.32
PNKP-202ENST00000593706 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.03■□□□□ 0.32
PNKP-202ENST00000593706 FBXO22Q8NEZ5 403 aa17.03■□□□□ 0.32
PNKP-202ENST00000593706 DBF4BQ8NFT6 615 aa17.03■□□□□ 0.32
PNKP-202ENST00000593706 RUFY2Q8WXA3 655 aa17.03■□□□□ 0.32
PNKP-202ENST00000593706 PIBF1Q8WXW3 757 aa17.03■□□□□ 0.32
PNKP-202ENST00000593706 RIOX1Q9H6W3 641 aa17.03■□□□□ 0.32
PNKP-202ENST00000593706 COL4A6Q14031 1691 aa17.03■□□□□ 0.32
PNKP-202ENST00000593706 PNMA6FA0A0J9YX94 578 aa17.02■□□□□ 0.32
PNKP-202ENST00000593706 CYP21A2P08686 494 aa17.02■□□□□ 0.32
PNKP-202ENST00000593706 SMIM10L2AP0DMW4 78 aa17.02■□□□□ 0.32
PNKP-202ENST00000593706 SMIM10L2BP0DMW5 78 aa17.02■□□□□ 0.32
PNKP-202ENST00000593706 CATIPQ7Z7H3 387 aa17.02■□□□□ 0.32
PNKP-202ENST00000593706 TAF6LQ9Y6J9 622 aa17.02■□□□□ 0.32
PNKP-202ENST00000593706 FRMPD4Q14CM0 1322 aa17.01■□□□□ 0.31
PNKP-202ENST00000593706 TREHO43280 583 aa17.01■□□□□ 0.31
PNKP-202ENST00000593706 CYTH3O43739 400 aa17.01■□□□□ 0.31
PNKP-202ENST00000593706 STAM2O75886 525 aa17.01■□□□□ 0.31
PNKP-202ENST00000593706 NEDD9Q14511 834 aa17.01■□□□□ 0.31
PNKP-202ENST00000593706 SLC35G1Q2M3R5 365 aa17.01■□□□□ 0.31
PNKP-202ENST00000593706 PLEKHG4Q58EX7 1191 aa17.01■□□□□ 0.31
PNKP-202ENST00000593706 METTL7BQ6UX53 244 aa17.01■□□□□ 0.31
PNKP-202ENST00000593706 NCOA7Q8NI08 942 aa17.01■□□□□ 0.31
PNKP-202ENST00000593706 SEPT8Q92599 483 aa17.01■□□□□ 0.31
PNKP-202ENST00000593706 YME1L1Q96TA2 773 aa17.01■□□□□ 0.31
PNKP-202ENST00000593706 C17orf80Q9BSJ5 609 aa17.01■□□□□ 0.31
PNKP-202ENST00000593706 USP26Q9BXU7 913 aa17.01■□□□□ 0.31
PNKP-202ENST00000593706 UBE2ZQ9H832 354 aaPredicted RBP17.01■□□□□ 0.31
PNKP-202ENST00000593706 SENP2Q9HC62 589 aa17.01■□□□□ 0.31
PNKP-202ENST00000593706 ZNF215Q9UL58 517 aaPredicted RBP17.01■□□□□ 0.31
PNKP-202ENST00000593706 E7EWF7 191 aa17■□□□□ 0.31
PNKP-202ENST00000593706 FIBPO43427 364 aa17■□□□□ 0.31
PNKP-202ENST00000593706 CAND2O75155 1236 aa17■□□□□ 0.31
PNKP-202ENST00000593706 TRIOO75962 3097 aa17■□□□□ 0.31
PNKP-202ENST00000593706 GNAT1P11488 350 aa17■□□□□ 0.31
PNKP-202ENST00000593706 PLA2G5P39877 138 aa17■□□□□ 0.31
PNKP-202ENST00000593706 MRPS9P82933 396 aaKnown RBP17■□□□□ 0.31
PNKP-202ENST00000593706 SP4Q02446 784 aa17■□□□□ 0.31
PNKP-202ENST00000593706 TROAPQ12815 778 aa17■□□□□ 0.31
PNKP-202ENST00000593706 CYFIP1Q7L576 1253 aa17■□□□□ 0.31
PNKP-202ENST00000593706 TRIM50Q86XT4 487 aa17■□□□□ 0.31
PNKP-202ENST00000593706 SMARCC2Q8TAQ2 1214 aa17■□□□□ 0.31
PNKP-202ENST00000593706 CUL5Q93034 780 aa17■□□□□ 0.31
PNKP-202ENST00000593706 FAM122AQ96E09 287 aa17■□□□□ 0.31
PNKP-202ENST00000593706 INPP4AQ96PE3 977 aaPredicted RBP17■□□□□ 0.31
PNKP-202ENST00000593706 RNPEPQ9H4A4 650 aa17■□□□□ 0.31
PNKP-202ENST00000593706 UPP2O95045 317 aa16.99■□□□□ 0.31
PNKP-202ENST00000593706 KCNA5P22460 613 aa16.99■□□□□ 0.31
PNKP-202ENST00000593706 HOXC8P31273 242 aa16.99■□□□□ 0.31
PNKP-202ENST00000593706 HTRA4P83105 476 aaPredicted RBP16.99■□□□□ 0.31
PNKP-202ENST00000593706 PTPROQ16827 1216 aa16.99■□□□□ 0.31
PNKP-202ENST00000593706 BMP2KLQ5H9B9 411 aa16.99■□□□□ 0.31
PNKP-202ENST00000593706 EPHX3Q9H6B9 360 aa16.99■□□□□ 0.31
PNKP-202ENST00000593706 BCAS3Q9H6U6 928 aa16.99■□□□□ 0.31
PNKP-202ENST00000593706 RTEL1Q9NZ71 1219 aa16.99■□□□□ 0.31
PNKP-202ENST00000593706 SEC63Q9UGP8 760 aaKnown RBP16.99■□□□□ 0.31
PNKP-202ENST00000593706 HCN4Q9Y3Q4 1203 aa16.99■□□□□ 0.31
PNKP-202ENST00000593706 TTC3P53804 2025 aa16.98■□□□□ 0.31
PNKP-202ENST00000593706 ICAM3P32942 547 aa16.98■□□□□ 0.31
PNKP-202ENST00000593706 ARHGAP4P98171 946 aa16.98■□□□□ 0.31
PNKP-202ENST00000593706 MKRN4PQ13434 485 aaPredicted RBP16.98■□□□□ 0.31
PNKP-202ENST00000593706 TMEM31Q5JXX7 168 aa16.98■□□□□ 0.31
PNKP-202ENST00000593706 UTP14CQ5TAP6 766 aaKnown RBP16.98■□□□□ 0.31
PNKP-202ENST00000593706 CTCFLQ8NI51 663 aaPredicted RBP16.98■□□□□ 0.31
PNKP-202ENST00000593706 SP7Q8TDD2 431 aaPredicted RBP16.98■□□□□ 0.31
PNKP-202ENST00000593706 MAP4K1Q92918 833 aa16.98■□□□□ 0.31
PNKP-202ENST00000593706 RRP36Q96EU6 259 aaKnown RBP16.98■□□□□ 0.31
PNKP-202ENST00000593706 SAMD11Q96NU1 681 aa16.98■□□□□ 0.31
PNKP-202ENST00000593706 GPR20Q99678 358 aa16.98■□□□□ 0.31
PNKP-202ENST00000593706 SETD4Q9NVD3 440 aa16.98■□□□□ 0.31
PNKP-202ENST00000593706 MYH9P35579 1960 aaKnown RBP16.98■□□□□ 0.31
PNKP-202ENST00000593706 MUC6Q6W4X9 2439 aa16.98■□□□□ 0.31
PNKP-202ENST00000593706 SPATA31C2B4DYI2 1134 aa16.97■□□□□ 0.31
PNKP-202ENST00000593706 KIF5BP33176 963 aa16.97■□□□□ 0.31
PNKP-202ENST00000593706 SEMA3FQ13275 785 aa16.97■□□□□ 0.31
PNKP-202ENST00000593706 EPC2Q52LR7 807 aa16.97■□□□□ 0.31
PNKP-202ENST00000593706 TIGD5Q53EQ6 642 aa16.97■□□□□ 0.31
PNKP-202ENST00000593706 PCNX4Q63HM2 1172 aa16.97■□□□□ 0.31
PNKP-202ENST00000593706 LMBR1Q8WVP7 490 aa16.97■□□□□ 0.31
PNKP-202ENST00000593706 APBB2Q92870 758 aa16.97■□□□□ 0.31
PNKP-202ENST00000593706 MRPL38Q96DV4 380 aaKnown RBP16.97■□□□□ 0.31
PNKP-202ENST00000593706 LRFN3Q9BTN0 628 aa16.97■□□□□ 0.31
PNKP-202ENST00000593706 SPZ1Q9BXG8 430 aa16.97■□□□□ 0.31
PNKP-202ENST00000593706 IFIH1Q9BYX4 1025 aaKnown RBP16.97■□□□□ 0.31
PNKP-202ENST00000593706 EVPLQ92817 2033 aa16.97■□□□□ 0.31
PNKP-202ENST00000593706 WDFY4Q6ZS81 3184 aa16.97■□□□□ 0.31
PNKP-202ENST00000593706 WDR81Q562E7 1941 aa16.96■□□□□ 0.31
PNKP-202ENST00000593706 USP17L6PQ6QN14 398 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms