RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 IL9P15248 144 aa18.86■□□□□ 0.61
CDC42BPB-205ENST00000559245 CCND2P30279 289 aa18.86■□□□□ 0.61
CDC42BPB-205ENST00000559245 HOXC8P31273 242 aa18.86■□□□□ 0.61
CDC42BPB-205ENST00000559245 SEC23AQ15436 765 aa18.86■□□□□ 0.61
CDC42BPB-205ENST00000559245 EPC2Q52LR7 807 aa18.86■□□□□ 0.61
CDC42BPB-205ENST00000559245 PTCRAQ6ISU1 281 aaPredicted RBP18.86■□□□□ 0.61
CDC42BPB-205ENST00000559245 SAMD11Q96NU1 681 aa18.86■□□□□ 0.61
CDC42BPB-205ENST00000559245 TUT1Q9H6E5 874 aaKnown RBP18.86■□□□□ 0.61
CDC42BPB-205ENST00000559245 PALM3A6NDB9 673 aaPredicted RBP18.85■□□□□ 0.61
CDC42BPB-205ENST00000559245 TREHO43280 583 aa18.85■□□□□ 0.61
CDC42BPB-205ENST00000559245 LGALS2P05162 132 aa18.85■□□□□ 0.61
CDC42BPB-205ENST00000559245 SMIM10L2AP0DMW4 78 aa18.85■□□□□ 0.61
CDC42BPB-205ENST00000559245 SMIM10L2BP0DMW5 78 aa18.85■□□□□ 0.61
CDC42BPB-205ENST00000559245 PTPROQ16827 1216 aa18.85■□□□□ 0.61
CDC42BPB-205ENST00000559245 CHD1LQ86WJ1 897 aa18.85■□□□□ 0.61
CDC42BPB-205ENST00000559245 HOMER1Q86YM7 354 aa18.85■□□□□ 0.61
CDC42BPB-205ENST00000559245 SEPT8Q92599 483 aa18.85■□□□□ 0.61
CDC42BPB-205ENST00000559245 YME1L1Q96TA2 773 aa18.85■□□□□ 0.61
CDC42BPB-205ENST00000559245 RNPEPQ9H4A4 650 aa18.85■□□□□ 0.61
CDC42BPB-205ENST00000559245 BCAS3Q9H6U6 928 aa18.85■□□□□ 0.61
CDC42BPB-205ENST00000559245 PIEZO1Q92508 2521 aa18.85■□□□□ 0.61
CDC42BPB-205ENST00000559245 COL4A6Q14031 1691 aa18.85■□□□□ 0.61
CDC42BPB-205ENST00000559245 GCOM1H8Y6P7 765 aaPredicted RBP18.84■□□□□ 0.61
CDC42BPB-205ENST00000559245 UPP2O95045 317 aa18.84■□□□□ 0.61
CDC42BPB-205ENST00000559245 POLR2MP0CAP2 368 aa18.84■□□□□ 0.61
CDC42BPB-205ENST00000559245 SSTR3P32745 418 aaPredicted RBP18.84■□□□□ 0.61
CDC42BPB-205ENST00000559245 GPM6BQ13491 265 aa18.84■□□□□ 0.61
CDC42BPB-205ENST00000559245 TIGD5Q53EQ6 642 aa18.84■□□□□ 0.61
CDC42BPB-205ENST00000559245 CYB5R4Q7L1T6 521 aa18.84■□□□□ 0.61
CDC42BPB-205ENST00000559245 FCHSD1Q86WN1 690 aa18.84■□□□□ 0.61
CDC42BPB-205ENST00000559245 TOP1MTQ969P6 601 aa18.84■□□□□ 0.61
CDC42BPB-205ENST00000559245 PIGSQ96S52 555 aa18.84■□□□□ 0.61
CDC42BPB-205ENST00000559245 OSBPL7Q9BZF2 842 aa18.84■□□□□ 0.61
CDC42BPB-205ENST00000559245 GRXCR2A6NFK2 248 aa18.83■□□□□ 0.6
CDC42BPB-205ENST00000559245 PRR33A8MZF0 331 aa18.83■□□□□ 0.6
CDC42BPB-205ENST00000559245 H3BNC9 293 aa18.83■□□□□ 0.6
CDC42BPB-205ENST00000559245 CAND2O75155 1236 aa18.83■□□□□ 0.6
CDC42BPB-205ENST00000559245 CTSHP09668 335 aa18.83■□□□□ 0.6
CDC42BPB-205ENST00000559245 TRAF1Q13077 416 aa18.83■□□□□ 0.6
CDC42BPB-205ENST00000559245 SLC35G1Q2M3R5 365 aa18.83■□□□□ 0.6
CDC42BPB-205ENST00000559245 PUS10Q3MIT2 529 aaKnown RBP18.83■□□□□ 0.6
CDC42BPB-205ENST00000559245 BANK1Q8NDB2 785 aa18.83■□□□□ 0.6
CDC42BPB-205ENST00000559245 NEK9Q8TD19 979 aa18.83■□□□□ 0.6
CDC42BPB-205ENST00000559245 RWDD1Q9H446 243 aaPredicted RBP18.83■□□□□ 0.6
CDC42BPB-205ENST00000559245 RIOX1Q9H6W3 641 aa18.83■□□□□ 0.6
CDC42BPB-205ENST00000559245 LOXHD1Q8IVV2 1947 aa18.82■□□□□ 0.6
CDC42BPB-205ENST00000559245 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.82■□□□□ 0.6
CDC42BPB-205ENST00000559245 H3BQ06 376 aaPredicted RBP18.82■□□□□ 0.6
CDC42BPB-205ENST00000559245 NOP56O00567 594 aaKnown RBP18.82■□□□□ 0.6
CDC42BPB-205ENST00000559245 NUCB1Q02818 461 aa18.82■□□□□ 0.6
CDC42BPB-205ENST00000559245 GRM4Q14833 912 aa18.82■□□□□ 0.6
CDC42BPB-205ENST00000559245 GNPTABQ3T906 1256 aa18.82■□□□□ 0.6
CDC42BPB-205ENST00000559245 TMEM192Q8IY95 271 aa18.82■□□□□ 0.6
CDC42BPB-205ENST00000559245 USP26Q9BXU7 913 aa18.82■□□□□ 0.6
CDC42BPB-205ENST00000559245 SETD4Q9NVD3 440 aa18.82■□□□□ 0.6
CDC42BPB-205ENST00000559245 GNAT1P11488 350 aa18.81■□□□□ 0.6
CDC42BPB-205ENST00000559245 ICAM3P32942 547 aa18.81■□□□□ 0.6
CDC42BPB-205ENST00000559245 MRPS9P82933 396 aaKnown RBP18.81■□□□□ 0.6
CDC42BPB-205ENST00000559245 TCEAL5Q5H9L2 206 aa18.81■□□□□ 0.6
CDC42BPB-205ENST00000559245 CYFIP1Q7L576 1253 aa18.81■□□□□ 0.6
CDC42BPB-205ENST00000559245 PABPC5Q96DU9 382 aaKnown RBP18.81■□□□□ 0.6
CDC42BPB-205ENST00000559245 FRMPD4Q14CM0 1322 aa18.8■□□□□ 0.6
CDC42BPB-205ENST00000559245 TTC3P53804 2025 aa18.8■□□□□ 0.6
CDC42BPB-205ENST00000559245 CYTH3O43739 400 aa18.8■□□□□ 0.6
CDC42BPB-205ENST00000559245 STAM2O75886 525 aa18.8■□□□□ 0.6
CDC42BPB-205ENST00000559245 ALADP13716 330 aa18.8■□□□□ 0.6
CDC42BPB-205ENST00000559245 AAMPQ13685 434 aa18.8■□□□□ 0.6
CDC42BPB-205ENST00000559245 NEDD9Q14511 834 aa18.8■□□□□ 0.6
CDC42BPB-205ENST00000559245 METTL7BQ6UX53 244 aa18.8■□□□□ 0.6
CDC42BPB-205ENST00000559245 EP400NLQ6ZTU2 488 aa18.8■□□□□ 0.6
CDC42BPB-205ENST00000559245 APBB2Q92870 758 aa18.8■□□□□ 0.6
CDC42BPB-205ENST00000559245 INPP4AQ96PE3 977 aaPredicted RBP18.8■□□□□ 0.6
CDC42BPB-205ENST00000559245 GPR20Q99678 358 aa18.8■□□□□ 0.6
CDC42BPB-205ENST00000559245 IFIH1Q9BYX4 1025 aaKnown RBP18.8■□□□□ 0.6
CDC42BPB-205ENST00000559245 IL25Q9H293 177 aa18.8■□□□□ 0.6
CDC42BPB-205ENST00000559245 C5orf42Q9H799 3197 aa18.79■□□□□ 0.6
CDC42BPB-205ENST00000559245 PNMA6FA0A0J9YX94 578 aa18.79■□□□□ 0.6
CDC42BPB-205ENST00000559245 SPATA31C2B4DYI2 1134 aa18.79■□□□□ 0.6
CDC42BPB-205ENST00000559245 IGHDP01880 384 aa18.79■□□□□ 0.6
CDC42BPB-205ENST00000559245 TRDNQ13061 729 aa18.79■□□□□ 0.6
CDC42BPB-205ENST00000559245 SEMA3FQ13275 785 aa18.79■□□□□ 0.6
CDC42BPB-205ENST00000559245 FAM26DQ5JW98 314 aa18.79■□□□□ 0.6
CDC42BPB-205ENST00000559245 TRIM50Q86XT4 487 aa18.79■□□□□ 0.6
CDC42BPB-205ENST00000559245 NSUN3Q9H649 340 aaKnown RBP18.79■□□□□ 0.6
CDC42BPB-205ENST00000559245 RTEL1Q9NZ71 1219 aa18.79■□□□□ 0.6
CDC42BPB-205ENST00000559245 ZNF215Q9UL58 517 aaPredicted RBP18.79■□□□□ 0.6
CDC42BPB-205ENST00000559245 KIAA1671Q9BY89 1806 aa18.79■□□□□ 0.6
CDC42BPB-205ENST00000559245 FIBPO43427 364 aa18.78■□□□□ 0.6
CDC42BPB-205ENST00000559245 ADAM17P78536 824 aa18.78■□□□□ 0.6
CDC42BPB-205ENST00000559245 ARHGAP4P98171 946 aa18.78■□□□□ 0.6
CDC42BPB-205ENST00000559245 COL19A1Q14993 1142 aa18.78■□□□□ 0.6
CDC42BPB-205ENST00000559245 UTP14CQ5TAP6 766 aaKnown RBP18.78■□□□□ 0.6
CDC42BPB-205ENST00000559245 UIMC1Q96RL1 719 aa18.78■□□□□ 0.6
CDC42BPB-205ENST00000559245 SENP2Q9HC62 589 aa18.78■□□□□ 0.6
CDC42BPB-205ENST00000559245 FAM50BQ9Y247 325 aa18.78■□□□□ 0.6
CDC42BPB-205ENST00000559245 TELO2Q9Y4R8 837 aa18.78■□□□□ 0.6
CDC42BPB-205ENST00000559245 IFIT3O14879 490 aaKnown RBP18.77■□□□□ 0.6
CDC42BPB-205ENST00000559245 CSPP1Q1MSJ5 1256 aa18.77■□□□□ 0.6
CDC42BPB-205ENST00000559245 FIBCD1Q8N539 461 aa18.77■□□□□ 0.6
CDC42BPB-205ENST00000559245 LMBR1Q8WVP7 490 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms